Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00115 Erythranthe guttata HOM05D007827 ORTHO05D009749 2.5e-49 199.5 210 100.0
SalBow4G1896 Salvia bowleyana HOM05D007827 ORTHO05D009749 7.2e-20 101.7 71 64.8
Rhsim11G0042400 Rhododendron simsii HOM05D007827 ORTHO05D009749 1.5e-17 94.0 67 64.2
Dinv28003 Davidia involucrata HOM05D007827 ORTHO05D009749 2.0e-17 93.6 69 65.2
Cc08_g10870 Coffea canephora HOM05D007827 ORTHO05D009749 4.3e-17 92.4 68 66.2
Actinidia01227 Actinidia chinensis HOM05D007827 ORTHO05D009749 9.7e-17 91.3 59 78.0
CSS0031213 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 3.7e-16 89.4 73 65.8
SGA_v2.0_scaffold20G09207 Striga asiatica HOM05D007827 ORTHO05D009749 8.2e-16 88.2 71 66.2
Oeu018628.1 Olea europaea HOM05D007827 ORTHO05D009749 1.1e-15 87.8 65 63.1
Oeu047101.1 Olea europaea HOM05D007827 ORTHO05D009749 4.1e-15 85.9 59 66.1
CSS0026056 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 5.3e-15 85.5 73 61.6
Hma1.2p1_1933F.1_g308040 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 6.9e-15 85.1 65 61.5
DCAR_003136 Daucus carota HOM05D007827 ORTHO05D009749 2.0e-14 83.6 66 60.6
Hma1.2p1_0801F.1_g220250 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 2.0e-14 83.6 64 60.9
CSS0004361 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 2.6e-14 83.2 62 67.7
Atru.chr7.1942 Acer truncatum HOM05D007827 ORTHO05D009749 4.5e-14 82.4 67 61.2
Nitab4.5_0000972g0020 Nicotiana tabacum HOM05D007827 ORTHO05D009749 5.9e-14 82.0 74 54.1
Lsat_1_v5_gn_6_13921 Lactuca sativa HOM05D007827 ORTHO05D009749 1.0e-13 81.3 76 52.6
Nitab4.5_0007037g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 1.3e-13 80.9 69 58.0
Sabra06G0174900 Salix brachista HOM05D007827 ORTHO05D009749 2.2e-13 80.1 71 54.9
Sopen06g006480 Solanum pennellii HOM05D007827 ORTHO05D009749 2.2e-13 80.1 64 62.5
Nitab4.5_0002039g0090 Nicotiana tabacum HOM05D007827 ORTHO05D009749 2.9e-13 79.7 69 56.5
Solyc06g011440.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 2.9e-13 79.7 64 62.5
PGSC0003DMG400029878 Solanum tuberosum HOM05D007827 ORTHO05D009749 2.9e-13 79.7 64 62.5
CAN.G130.10 Capsicum annuum HOM05D007827 ORTHO05D009749 3.8e-13 79.3 73 61.6
Peaxi162Scf00297g00062 Petunia axillaris HOM05D007827 ORTHO05D009749 3.8e-13 79.3 68 58.8
ClCG08G010040 Citrullus lanatus HOM05D007827 ORTHO05D009749 5.0e-13 79.0 70 55.7
Nitab4.5_0007177g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 5.0e-13 79.0 74 52.7
Peaxi162Scf01001g00001 Petunia axillaris HOM05D007827 ORTHO05D009749 5.0e-13 79.0 65 60.0
ECA240G3049 Erigeron canadensis HOM05D007827 ORTHO05D009749 1.4e-12 77.4 66 57.6
Haze_18158 Corylus avellana HOM05D007827 ORTHO05D009749 2.5e-12 76.6 72 56.9
unitig_37.g12945 Utricularia gibba HOM05D007827 ORTHO05D009749 5.5e-12 75.5 82 54.9
Potri.006G226200 Populus trichocarpa HOM05D007827 ORTHO05D009749 7.2e-12 75.1 71 54.9
Solyc08g062840.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 9.4e-12 74.7 51 70.6
Sopen08g018370 Solanum pennellii HOM05D007827 ORTHO05D009749 9.4e-12 74.7 51 70.6
PGSC0003DMG400008199 Solanum tuberosum HOM05D007827 ORTHO05D009749 9.4e-12 74.7 51 70.6
CiPaw.16G027300 Carya illinoinensis HOM05D007827 ORTHO05D009749 2.7e-11 73.2 57 56.1
MD15G1056900 Malus domestica HOM05D007827 ORTHO05D009749 6.1e-11 72.0 70 52.9
Cpa.g.sc7.157 Carica papaya HOM05D007827 ORTHO05D009749 2.3e-10 70.1 70 51.4
MELO3C011460.2 Cucumis melo HOM05D007827 ORTHO05D009749 2.3e-10 70.1 71 50.7
Aqoxy7G01166 Aquilegia oxysepala HOM05D007827 ORTHO05D009749 3.0e-10 69.7 72 47.2
QL02p000760 Quercus lobata HOM05D007827 ORTHO05D009749 3.0e-10 69.7 69 49.3
CsaV3_6G032200 Cucumis sativus L. HOM05D007827 ORTHO05D009749 5.1e-10 68.9 71 49.3
Glyma.04G052400 Glycine max HOM05D007827 ORTHO05D009749 8.8e-10 68.2 66 51.5
Lj5g0025960 Lotus japonicus HOM05D007827 ORTHO05D009749 8.8e-10 68.2 70 50.0
RcHm_v2.0_Chr6g0311201 Rosa chinensis HOM05D007827 ORTHO05D009749 8.8e-10 68.2 46 67.4
CSS0037057 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 1.1e-09 67.8 48 68.8
Medtr1g015840 Medicago truncatula HOM05D007827 ORTHO05D009749 1.1e-09 67.8 70 50.0
Prupe.1G409500 Prunus persica HOM05D007827 ORTHO05D009749 1.1e-09 67.8 71 53.5
Thecc.09G056900 Theobroma cacao HOM05D007827 ORTHO05D009749 1.1e-09 67.8 74 48.6
Lalb_Chr23g0267841 Lupinus albus HOM05D007827 ORTHO05D009749 2.6e-09 66.6 72 54.2
Psat6g021400 Pisum sativum HOM05D007827 ORTHO05D009749 4.4e-09 65.9 70 47.1
Lj1g0018619 Lotus japonicus HOM05D007827 ORTHO05D009749 5.7e-09 65.5 77 53.2
Medtr3g104620 Medicago truncatula HOM05D007827 ORTHO05D009749 7.4e-09 65.1 70 48.6
SGA_v2.0_scaffold169G38700 Striga asiatica HOM05D007827 ORTHO05D009749 7.4e-09 65.1 47 59.6
FvH4_2g31620 Fragaria vesca HOM05D007827 ORTHO05D009749 9.7e-09 64.7 58 60.3
FAN24G3029 Fragaria x ananassa HOM05D007827 ORTHO05D009749 9.7e-09 64.7 58 60.3
FAN27G2967 Fragaria x ananassa HOM05D007827 ORTHO05D009749 9.7e-09 64.7 42 71.4
Sed0014394 Sechium edule HOM05D007827 ORTHO05D009749 9.7e-09 64.7 74 44.6
TPR.G3528 Trifolium pratense HOM05D007827 ORTHO05D009749 1.7e-08 63.9 59 54.2
ATR0789G035 Amborella trichopoda HOM05D007827 ORTHO05D009749 2.2e-08 63.5 58 53.4
Phvul.009G078700 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 2.8e-08 63.2 72 45.8
Sed0025262 Sechium edule HOM05D007827 ORTHO05D009749 6.3e-08 62.0 72 47.2
TPR.G13014 Trifolium pratense HOM05D007827 ORTHO05D009749 8.2e-08 61.6 81 42.0
Psat5g036160 Pisum sativum HOM05D007827 ORTHO05D009749 1.1e-07 61.2 58 50.0
Gohir.A05G040950 Gossypium hirsutum HOM05D007827 ORTHO05D009749 2.4e-07 60.1 77 40.3
VMungo1309G0458 Vigna mungo HOM05D007827 ORTHO05D009749 2.4e-07 60.1 52 50.0
arahy.Tifrunner.gnm1.ann1.S72ULK Arachis hypogaea HOM05D007827 ORTHO05D009749 3.1e-07 59.7 47 59.6
arahy.Tifrunner.gnm1.ann1.WVJ8VS Arachis hypogaea HOM05D007827 ORTHO05D009749 3.1e-07 59.7 47 59.6
FAN15G3566 Fragaria x ananassa HOM05D007827 ORTHO05D009749 3.1e-07 59.7 60 55.0
Gohir.D05G042650 Gossypium hirsutum HOM05D007827 ORTHO05D009749 4.1e-07 59.3 77 40.3
Gorai.009G043700 Gossypium raimondii HOM05D007827 ORTHO05D009749 4.1e-07 59.3 77 40.3
Manes.16G082000 Manihot esculenta HOM05D007827 ORTHO05D009749 4.1e-07 59.3 71 53.5
HPP92_007654 Vanilla planifolia HOM05D007827 ORTHO05D009749 4.1e-07 59.3 60 50.0
Ciclev10010468m.g Citrus clementina HOM05D007827 ORTHO05D009749 2.6e-06 56.6 41 63.4
Phvul.001G037300 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 3.5e-06 56.2 46 60.9


User provided reference genes

Program Settings