Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00035 Erythranthe guttata HOM05D007100 ORTHO05D008958 6.0e-94 347.8 218 100.0
SGA_v2.0_scaffold20G09112 Striga asiatica HOM05D007100 ORTHO05D008958 2.5e-60 236.1 218 75.7
Ah.16g104500 Amaranthus hybridus HOM05D007100 ORTHO05D008958 2.3e-53 213.0 222 68.9
MD15G1126100 Malus domestica HOM05D007100 ORTHO05D008958 5.1e-53 211.8 219 71.7
CAN.G1230.3 Capsicum annuum HOM05D007100 ORTHO05D008958 1.1e-52 210.7 227 70.0
Thecc.09G023500 Theobroma cacao HOM05D007100 ORTHO05D008958 2.5e-52 209.5 224 70.1
Cpa.g.sc217.8 Carica papaya HOM05D007100 ORTHO05D008958 3.3e-52 209.1 222 68.5
Cc08_g00530 Coffea canephora HOM05D007100 ORTHO05D008958 4.3e-52 208.8 218 71.6
Potri.006G255600 Populus trichocarpa HOM05D007100 ORTHO05D008958 1.3e-51 207.2 226 70.8
Oeu057296.2 Olea europaea HOM05D007100 ORTHO05D008958 8.1e-51 204.5 221 69.7
Ah.10g035800 Amaranthus hybridus HOM05D007100 ORTHO05D008958 1.1e-50 204.1 222 67.6
Prupe.1G482000 Prunus persica HOM05D007100 ORTHO05D008958 1.1e-50 204.1 218 68.3
PGSC0003DMG400020466 Solanum tuberosum HOM05D007100 ORTHO05D008958 1.4e-50 203.8 222 68.9
Duzib168G1945 Durio zibethinus HOM05D007100 ORTHO05D008958 2.4e-50 203.0 223 69.1
Sabra18G0029100 Salix brachista HOM05D007100 ORTHO05D008958 4.0e-50 202.2 222 63.1
Solyc06g066000.3 Solanum lycopersicum HOM05D007100 ORTHO05D008958 9.0e-50 201.1 222 69.4
Sopen06g024480 Solanum pennellii HOM05D007100 ORTHO05D008958 9.0e-50 201.1 222 69.4
PGSC0003DMG400020484 Solanum tuberosum HOM05D007100 ORTHO05D008958 9.0e-50 201.1 222 69.4
Potri.018G026500 Populus trichocarpa HOM05D007100 ORTHO05D008958 1.2e-49 200.7 225 68.4
RcHm_v2.0_Chr6g0297791 Rosa chinensis HOM05D007100 ORTHO05D008958 2.9e-48 196.1 217 68.2
Sopen06g024470 Solanum pennellii HOM05D007100 ORTHO05D008958 2.9e-48 196.1 224 67.4
VMungo1309G2169 Vigna mungo HOM05D007100 ORTHO05D008958 3.8e-48 195.7 219 63.5
TAR625G1529 Trochodendron aralioides HOM05D007100 ORTHO05D008958 6.5e-48 194.9 220 67.3
Manes.03G013900 Manihot esculenta HOM05D007100 ORTHO05D008958 8.4e-48 194.5 219 64.8
CANSAT25G0532 Cannabis sativa HOM05D007100 ORTHO05D008958 2.5e-47 193.0 217 61.8
Lsat_1_v5_gn_6_21280 Lactuca sativa HOM05D007100 ORTHO05D008958 2.5e-47 193.0 222 67.6
Glyma.04G066000 Glycine max HOM05D007100 ORTHO05D008958 4.2e-47 192.2 219 66.7
unitig_32.g11115 Utricularia gibba HOM05D007100 ORTHO05D008958 7.1e-47 191.4 218 65.6
AUR62012407 Chenopodium quinoa HOM05D007100 ORTHO05D008958 9.3e-47 191.0 152 82.2
FvH4_2g28951 Fragaria vesca HOM05D007100 ORTHO05D008958 1.2e-46 190.7 216 69.0
Nitab4.5_0000109g0380 Nicotiana tabacum HOM05D007100 ORTHO05D008958 4.6e-46 188.7 160 81.9
Manes.16G122700 Manihot esculenta HOM05D007100 ORTHO05D008958 6.0e-46 188.3 222 62.6
TPR.G3111 Trifolium pratense HOM05D007100 ORTHO05D008958 7.9e-46 188.0 222 63.1
Lj1g0026662 Lotus japonicus HOM05D007100 ORTHO05D008958 1.8e-45 186.8 222 64.4
FAN20G2791 Fragaria x ananassa HOM05D007100 ORTHO05D008958 3.0e-45 186.0 216 68.1
AUR62031529 Chenopodium quinoa HOM05D007100 ORTHO05D008958 5.1e-45 185.3 220 62.3
COL.COLO4_18868 Corchorus olitorius HOM05D007100 ORTHO05D008958 6.7e-45 184.9 223 63.7
CsaV3_2G032160 Cucumis sativus L. HOM05D007100 ORTHO05D008958 8.7e-45 184.5 212 57.5
PSO210G2345 Papaver somniferum HOM05D007100 ORTHO05D008958 8.7e-45 184.5 229 65.9
TWI32G1182 Tripterygium wilfordii HOM05D007100 ORTHO05D008958 8.7e-45 184.5 225 62.2
Phvul.009G092366 Phaseolus vulgaris HOM05D007100 ORTHO05D008958 1.1e-44 184.1 219 63.9
BraA01t00579Z Brassica rapa HOM05D007100 ORTHO05D008958 4.3e-44 182.2 218 61.5
PSO210G6161 Papaver somniferum HOM05D007100 ORTHO05D008958 4.3e-44 182.2 225 64.4
BcaC09g52005 Brassica carinata HOM05D007100 ORTHO05D008958 5.7e-44 181.8 217 61.8
BolC1t00671H Brassica oleracea HOM05D007100 ORTHO05D008958 5.7e-44 181.8 214 63.6
Eucgr.C02765 Eucalyptus grandis HOM05D007100 ORTHO05D008958 5.7e-44 181.8 231 64.1
Nitab4.5_0003634g0020 Nicotiana tabacum HOM05D007100 ORTHO05D008958 7.4e-44 181.4 212 67.0
CARHR240140 Cardamine hirsuta HOM05D007100 ORTHO05D008958 1.3e-43 180.6 216 62.5
Atru.chr7.2441 Acer truncatum HOM05D007100 ORTHO05D008958 1.6e-43 180.3 225 63.6
MELO3C011269.2 Cucumis melo HOM05D007100 ORTHO05D008958 2.1e-43 179.9 214 58.9
CSS0028708 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 3.7e-43 179.1 224 64.3
CSS0035808 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 3.7e-43 179.1 224 64.3
Solyc06g065990.1 Solanum lycopersicum HOM05D007100 ORTHO05D008958 1.1e-42 177.6 224 64.3
ClCG08G013430 Citrullus lanatus HOM05D007100 ORTHO05D008958 1.4e-42 177.2 214 57.9
AL7G19610 Arabidopsis lyrata HOM05D007100 ORTHO05D008958 1.8e-42 176.8 220 61.4
Lalb_Chr08g0244131 Lupinus albus HOM05D007100 ORTHO05D008958 2.4e-42 176.4 218 61.5
Carub.0007s0834 Capsella rubella HOM05D007100 ORTHO05D008958 3.1e-42 176.0 220 61.4
ATR0800G074 Amborella trichopoda HOM05D007100 ORTHO05D008958 4.1e-42 175.6 144 67.4
Sed0021254 Sechium edule HOM05D007100 ORTHO05D008958 9.0e-42 174.5 222 60.8
Aqoxy7G03649 Aquilegia oxysepala HOM05D007100 ORTHO05D008958 1.5e-41 173.7 221 63.8
AT4G32260 Arabidopsis thaliana HOM05D007100 ORTHO05D008958 1.5e-41 173.7 220 60.9
Aa31LG2G17720 Aethionema arabicum HOM05D007100 ORTHO05D008958 5.9e-41 171.8 231 58.4
Glyma.06G067400 Glycine max HOM05D007100 ORTHO05D008958 2.2e-40 169.9 219 61.6
Hma1.2p1_0243F.1_g100880 Hydrangea macrophylla HOM05D007100 ORTHO05D008958 2.2e-40 169.9 225 63.1
QL02p021503 Quercus lobata HOM05D007100 ORTHO05D008958 2.2e-40 169.9 223 63.2
HanXRQChr13g0403031 Helianthus annuus HOM05D007100 ORTHO05D008958 3.8e-40 169.1 224 64.7
CiPaw.03G162500 Carya illinoinensis HOM05D007100 ORTHO05D008958 5.0e-40 168.7 222 63.1
MBI18_g07570_MAGBIO Magnolia biondii HOM05D007100 ORTHO05D008958 5.0e-40 168.7 209 62.2
Medtr3g106820 Medicago truncatula HOM05D007100 ORTHO05D008958 6.5e-40 168.3 222 57.7
Ca_15742_v3 Cicer arietinum L. HOM05D007100 ORTHO05D008958 8.5e-40 167.9 163 68.7
CDE02G1895 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 2.5e-39 166.4 217 61.3
PGR044G2669 Punica granatum HOM05D007100 ORTHO05D008958 4.2e-39 165.6 218 56.9
CDE08G0375 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 5.5e-39 165.2 218 60.6
Sp7g29990 Schrenkiella parvula HOM05D007100 ORTHO05D008958 1.2e-38 164.1 217 59.4
Thhalv10026214m.g Eutrema salsugineum HOM05D007100 ORTHO05D008958 3.6e-38 162.5 217 59.4
ECA233G2559 Erigeron canadensis HOM05D007100 ORTHO05D008958 1.0e-37 161.0 221 62.4
Duzib150G1121 Durio zibethinus HOM05D007100 ORTHO05D008958 1.3e-37 160.6 223 61.4
Cfa013136 Carpinus fangiana HOM05D007100 ORTHO05D008958 2.3e-37 159.8 224 59.8
Ciclev10009435m.g Citrus clementina HOM05D007100 ORTHO05D008958 2.3e-37 159.8 222 49.5
Rhsim02G0202100 Rhododendron simsii HOM05D007100 ORTHO05D008958 1.9e-36 156.8 216 59.3
EL10Ac2g04205 Beta vulgaris HOM05D007100 ORTHO05D008958 5.7e-36 155.2 219 55.7
Dinv08635 Davidia involucrata HOM05D007100 ORTHO05D008958 5.7e-36 155.2 126 79.4
BcaNung03145 Brassica carinata HOM05D002526 ORTHO05D004039 1.3e-35 154.1 213 58.2
Nn2g12100 Nelumbo nucifera HOM05D007100 ORTHO05D008958 4.8e-35 152.1 151 73.5
C01p06770 Brassica napus HOM05D002526 ORTHO05D004039 2.4e-34 149.8 162 57.4
Lj7A724T61 Lonicera japonica HOM05D007100 ORTHO05D008958 5.3e-34 148.7 214 58.4
A01p06140 Brassica napus HOM05D002526 ORTHO05D004039 2.0e-33 146.7 166 56.6
Sc09g0008150 Simmondsia chinensis HOM05D007100 ORTHO05D008958 2.9e-32 142.9 152 70.4
Nitab4.5_0011986g0010 Nicotiana tabacum HOM05D007100 ORTHO05D008958 9.4e-31 137.9 124 82.3
Os03g0278900 Oryza sativa ssp. japonica HOM05D007100 ORTHO05D008958 2.3e-29 133.3 169 60.9
HPP92_017087 Vanilla planifolia HOM05D007100 ORTHO05D008958 1.5e-28 130.6 169 61.5
Gohir.D07G032851 Gossypium hirsutum HOM05D007100 ORTHO05D008958 3.7e-27 125.9 106 81.1
Gohir.A07G028825 Gossypium hirsutum HOM05D007100 ORTHO05D008958 1.8e-26 123.6 106 87.7
AagrBONN_evm.TU.Sc2ySwM_117.789 Anthoceros agrestis HOM05D007100 ORTHO05D008958 9.1e-26 121.3 161 52.2
Zm00001eb397520 Zea mays HOM05D007100 ORTHO05D008958 1.2e-25 120.9 217 53.0
Sabra06G0199900 Salix brachista HOM05D007100 ORTHO05D008958 1.5e-25 120.6 108 85.2
SMO347G0047 Selaginella moellendorffii HOM05D007100 ORTHO05D008958 2.5e-23 113.2 88 65.9
Nitab4.5_0002042g0090 Nicotiana tabacum HOM05D007100 ORTHO05D008958 7.2e-23 111.7 107 84.1
CiPaw.05G145000 Carya illinoinensis HOM05D007100 ORTHO05D008958 1.2e-22 110.9 74 81.1
SEGI_36293 Sequoiadendron giganteum HOM05D007100 ORTHO05D008958 4.7e-22 109.0 153 56.2
Pp3c16_15270 Physcomitrium patens HOM05D007100 ORTHO05D008958 8.8e-21 104.8 108 54.6
Pp3c6_23221 Physcomitrium patens HOM05D007100 ORTHO05D008958 2.6e-20 103.2 108 53.7
Cre11.g481450 Chlamydomonas reinhardtii HOM05D007100 ORTHO05D008958 3.3e-20 102.8 211 34.6
Pp3c5_7810 Physcomitrium patens HOM05D007100 ORTHO05D008958 5.7e-20 102.1 108 52.8
HPP92_017015 Vanilla planifolia HOM05D007100 ORTHO05D008958 2.8e-19 99.8 145 44.8
Mapoly0061s0013 Marchantia polymorpha HOM05D007100 ORTHO05D008958 6.3e-19 98.6 163 53.4
CBR_g39245 Chara braunii HOM05D007100 ORTHO05D008958 1.5e-15 87.4 79 59.5
PRCOL_00004936 Prasinoderma coloniale HOM05D007100 ORTHO05D008958 1.2e-14 84.3 85 48.2
RcHm_v2.0_Chr4g0429151 Rosa chinensis HOM05D007100 ORTHO05D008958 1.6e-14 84.0 60 73.3
Psat2g007880 Pisum sativum HOM05D007100 ORTHO05D008958 1.5e-12 77.4 84 53.6
MCO01G691 Micromonas commoda HOM05D007100 ORTHO05D008958 1.7e-11 73.9 69 60.9
ATR0743G144 Amborella trichopoda HOM05D007100 ORTHO05D008958 1.9e-07 60.5 114 43.0
AUR62039691 Chenopodium quinoa HOM05D026575 ORTHO05D028765 2.5e-07 60.1 39 82.1
AUR62044181 Chenopodium quinoa HOM05D026575 ORTHO05D028765 7.2e-07 58.5 39 79.5
ATR0829G181 Amborella trichopoda HOM05D007100 ORTHO05D008958 6.1e-06 55.5 139 36.0


User provided reference genes

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