Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 0.0e+00 1075.8 837 100.0
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 1.6e-118 431.4 762 66.8
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 1.1e-116 425.2 758 62.7
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 2.4e-111 407.5 776 52.4
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 2.8e-107 394.0 773 59.0
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 3.2e-95 354.0 762 54.5
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 3.3e-92 344.0 775 53.7
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 1.3e-91 342.0 767 48.9
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 1.3e-91 342.0 749 50.1
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.6e-91 341.7 771 50.2
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 5.3e-90 336.7 771 52.7
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 9.0e-90 335.9 772 50.9
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 1.2e-89 335.5 760 50.3
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.4e-87 328.6 771 52.1
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 3.2e-87 327.4 757 53.5
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 2.1e-86 324.7 750 55.2
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 7.9e-86 322.8 773 53.3
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 2.3e-85 321.2 742 52.4
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 2.5e-84 317.8 773 51.9
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 5.6e-84 316.6 775 56.1
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 1.1e-82 312.4 772 52.2
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 1.4e-82 312.0 767 51.8
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 4.0e-82 310.5 766 56.9
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 4.9e-80 303.5 773 53.4
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 1.4e-79 302.0 487 51.1
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 2.1e-78 298.1 737 53.7
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 4.6e-78 297.0 776 53.9
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 1.0e-77 295.8 759 54.9
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 3.0e-77 294.3 514 47.9
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 8.7e-77 292.7 487 55.0
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 1.1e-76 292.4 515 47.8
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 2.5e-76 291.2 753 56.7
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 5.7e-76 290.0 784 54.0
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 2.8e-75 287.7 751 57.5
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 4.5e-73 280.4 751 52.5
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 2.2e-72 278.1 770 49.6
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 9.4e-71 272.7 747 48.9
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 4.6e-70 270.4 735 42.7
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 7.4e-68 263.1 773 51.0
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 7.4e-68 263.1 514 48.4
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 1.7e-67 261.9 762 48.6
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 2.2e-67 261.5 738 50.7
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 6.3e-67 260.0 774 45.1
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 4.1e-66 257.3 758 50.8
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 5.3e-66 256.9 490 47.6
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 5.3e-66 256.9 490 47.6
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 1.5e-65 255.4 479 52.0
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 2.6e-65 254.6 457 50.5
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 4.5e-65 253.8 467 48.2
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 1.0e-64 252.7 516 43.6
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 2.2e-64 251.5 773 52.3
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 3.8e-64 250.8 772 46.5
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 3.8e-64 250.8 509 45.4
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 5.0e-64 250.4 773 45.9
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 4.7e-62 243.8 476 48.3
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 1.4e-61 242.3 497 45.7
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 2.3e-61 241.5 485 50.3
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 3.0e-61 241.1 778 52.1
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 3.0e-61 241.1 782 48.8
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 3.0e-61 241.1 512 48.6
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 2.0e-60 238.4 779 52.5
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 2.6e-60 238.0 482 47.1
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 4.4e-60 237.3 779 51.0
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 9.7e-60 236.1 790 50.1
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 8.2e-59 233.0 419 51.8
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 4.1e-58 230.7 497 44.5
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 5.9e-57 226.9 454 49.1
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 2.2e-56 224.9 780 49.7
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 5.0e-56 223.8 736 50.7
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 5.0e-56 223.8 513 47.2
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 1.9e-55 221.9 483 44.7
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 3.6e-54 217.6 512 47.3
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 8.0e-54 216.5 776 46.9
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 8.8e-53 213.0 516 48.1
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 2.6e-52 211.5 774 49.4
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 8.2e-51 206.5 771 47.1
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 7.0e-50 203.4 754 50.9
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 1.9e-47 195.3 767 47.8
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 2.1e-46 191.8 526 39.0
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 6.8e-45 186.8 494 43.9
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 2.6e-44 184.9 776 41.6
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 1.4e-42 179.1 486 42.6
unitig_748.g8080 Utricularia gibba HOM05D006421 ORTHO05D008268 2.4e-42 178.3 767 49.9
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 4.1e-42 177.6 512 40.2
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 1.9e-39 168.7 777 47.4
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 5.5e-39 167.2 777 48.9
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 3.0e-37 161.4 774 40.1
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 2.0e-36 158.7 763 43.3
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 8.3e-35 153.3 384 46.9
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 3.1e-34 151.4 754 45.8
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 3.1e-34 151.4 773 45.3
BraA10t43273Z Brassica rapa HOM05D006421 ORTHO05D008268 4.5e-33 147.5 179 50.3
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 8.6e-32 143.3 770 38.2
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 1.9e-31 142.1 343 51.0
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 1.2e-30 139.4 756 48.3
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 3.0e-29 134.8 482 43.6
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 4.9e-27 127.5 202 44.6
SEGI_28581 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 4.3e-23 114.4 537 35.2
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 5.6e-23 114.0 740 37.8
Potri.018G026300 Populus trichocarpa HOM05D006421 ORTHO05D008268 1.4e-21 109.4 451 29.0
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 4.4e-20 104.4 372 31.2
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 5.4e-18 97.4 424 37.5
TAR636G0610 Trochodendron aralioides HOM05D006421 ORTHO05D008268 7.0e-18 97.1 121 47.9
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 4.3e-15 87.8 732 39.9
FAN15G3016 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.4e-13 82.8 264 51.1
Zm00001eb206500 Zea mays HOM05D006421 ORTHO05D008268 1.8e-13 82.4 488 31.8
FAN15G2294 Fragaria x ananassa HOM05D006421 ORTHO05D008268 3.7e-11 74.7 113 47.8
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 2.7e-09 68.6 409 33.7
FAN15G3111 Fragaria x ananassa HOM05D006421 ORTHO05D008268 7.3e-07 60.5 85 45.9
Mapoly0009s0162 Marchantia polymorpha HOM05D006421 ORTHO05D008268 1.6e-06 59.3 165 30.3
CDE07G0223 Ceratophyllum demersum HOM05D006421 ORTHO05D008268 3.6e-06 58.2 218 26.6


User provided reference genes

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