Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 3.4e-169 598.2 292 100.0
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 2.6e-153 545.4 292 89.7
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 4.2e-151 538.1 292 89.0
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 1.3e-149 533.1 292 87.7
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 5.1e-149 531.2 292 87.0
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 1.5e-148 529.6 290 86.9
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 2.5e-148 528.9 289 87.9
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 2.5e-148 528.9 292 88.0
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 3.3e-148 528.5 292 87.0
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 9.6e-148 526.9 292 86.0
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 3.6e-147 525.0 292 85.6
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 1.8e-146 522.7 292 85.6
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 1.8e-146 522.7 290 84.8
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 2.4e-146 522.3 292 85.6
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 4.0e-146 521.5 292 85.6
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 6.9e-146 520.8 292 84.9
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 1.5e-145 519.6 292 84.9
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 2.6e-145 518.8 292 85.3
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 3.4e-145 518.5 291 85.6
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 3.4e-145 518.5 292 85.3
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 4.5e-145 518.1 290 84.8
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 4.5e-145 518.1 292 85.6
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 4.5e-145 518.1 292 85.6
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 5.8e-145 517.7 288 84.4
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 7.6e-145 517.3 292 86.0
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 9.9e-145 516.9 290 84.8
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 1.7e-144 516.2 292 85.3
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.7e-144 516.2 292 85.6
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 1.7e-144 516.2 294 86.1
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 2.9e-144 515.4 290 83.8
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 2.9e-144 515.4 292 84.6
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 2.9e-144 515.4 288 84.4
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 6.4e-144 514.2 292 84.2
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 6.4e-144 514.2 292 83.6
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 6.4e-144 514.2 292 83.6
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 8.4e-144 513.8 292 83.9
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 8.4e-144 513.8 290 84.5
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 8.4e-144 513.8 292 83.9
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.1e-143 513.5 292 85.3
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 1.4e-143 513.1 292 83.9
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 1.9e-143 512.7 288 83.7
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 1.9e-143 512.7 292 84.2
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 2.4e-143 512.3 292 84.2
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 3.2e-143 511.9 292 84.2
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 5.5e-143 511.1 292 85.3
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 7.1e-143 510.8 290 84.1
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 9.3e-143 510.4 292 82.9
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 1.2e-142 510.0 292 83.9
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 2.1e-142 509.2 289 84.1
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 2.1e-142 509.2 290 82.8
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 6.0e-142 507.7 288 82.6
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 1.3e-141 506.5 292 83.6
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 1.3e-141 506.5 288 82.3
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 6.7e-141 504.2 292 82.9
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 6.7e-141 504.2 292 82.9
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 1.1e-140 503.4 321 76.6
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 1.1e-140 503.4 287 83.6
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 1.5e-140 503.1 292 82.5
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 1.5e-140 503.1 288 81.6
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 3.3e-140 501.9 288 82.3
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 4.3e-140 501.5 292 82.2
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 5.6e-140 501.1 288 80.6
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 1.3e-139 500.0 290 83.4
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 2.1e-139 499.2 287 82.2
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 2.1e-139 499.2 287 82.2
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 3.7e-139 498.4 289 82.4
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 3.7e-139 498.4 292 83.2
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 6.2e-139 497.7 292 80.8
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 6.2e-139 497.7 292 80.8
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 1.1e-138 496.9 280 83.9
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 5.3e-138 494.6 292 80.1
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 2.6e-137 492.3 290 80.3
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 2.6e-137 492.3 293 80.5
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 5.8e-137 491.1 292 79.5
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 5.8e-137 491.1 292 79.5
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 1.3e-136 490.0 292 79.1
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 2.2e-136 489.2 292 78.8
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 2.9e-136 488.8 292 78.8
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 8.4e-136 487.3 291 78.4
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 1.1e-135 486.9 292 78.8
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 1.1e-135 486.9 292 78.4
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 2.5e-135 485.7 290 79.3
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 2.5e-135 485.7 288 81.2
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 3.2e-135 485.3 292 80.8
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 7.1e-135 484.2 291 78.4
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 1.2e-134 483.4 289 78.5
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 1.6e-134 483.0 292 78.4
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 1.6e-134 483.0 292 78.4
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 3.5e-134 481.9 292 78.4
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 3.0e-133 478.8 272 84.9
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 6.7e-133 477.6 292 76.7
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 6.7e-133 477.6 292 76.7
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 6.7e-133 477.6 274 84.3
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 1.9e-132 476.1 290 78.6
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 9.6e-132 473.8 292 76.4
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 9.6e-132 473.8 292 76.4
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 9.6e-132 473.8 289 79.6
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 4.8e-131 471.5 287 77.0
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 1.4e-130 469.9 292 79.8
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 2.4e-130 469.2 287 79.1
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 3.1e-130 468.8 278 80.9
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 4.1e-130 468.4 255 86.7
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 5.3e-130 468.0 292 79.5
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 1.7e-128 463.0 289 76.5
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 3.8e-128 461.8 272 81.2
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 3.8e-128 461.8 273 82.4
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 6.5e-128 461.1 313 74.8
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 7.2e-127 457.6 294 73.5
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 2.7e-126 455.7 287 74.6
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 3.3e-124 448.7 292 76.4
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 7.7e-121 437.6 288 71.5
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 5.0e-120 434.9 309 69.3
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 2.6e-116 422.5 281 69.0
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 5.7e-116 421.4 271 76.8
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 6.9e-114 414.5 267 72.7
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 8.5e-112 407.5 273 69.6
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 3.9e-109 398.7 281 65.1
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 7.2e-103 377.9 223 80.7
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 4.7e-94 348.6 321 58.9
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 8.3e-91 337.8 190 85.3
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 7.7e-89 331.3 186 87.1
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 4.4e-84 315.5 289 52.9
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 1.8e-82 310.1 294 54.4
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 4.1e-82 308.9 297 54.9
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 7.0e-82 308.1 183 82.5
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 1.0e-77 294.3 173 83.2
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 3.0e-77 292.7 188 72.3
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 3.3e-71 272.7 293 45.4
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 5.8e-60 235.3 310 44.8
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 8.6e-56 221.5 164 66.5
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 4.4e-52 209.1 224 52.7
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.4e-50 203.4 221 52.5
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 3.5e-49 199.5 106 85.8
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 3.2e-42 176.4 101 85.1
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 5.4e-42 175.6 102 83.3
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.5e-39 166.8 96 84.4
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 3.4e-28 129.8 75 86.7
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 7.4e-23 112.1 216 36.1
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 4.0e-21 106.3 96 61.5
MBI12_g19406_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D242193 5.1e-08 62.8 51 56.9
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 2.5e-07 60.5 40 80.0


User provided reference genes

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