Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g470890 Medicago truncatula HOM05D015419 ORTHO05D016348 8.2e-117 423.7 208 100.0
Medtr0070s0030 Medicago truncatula HOM05D015419 ORTHO05D011822 6.0e-51 204.9 123 82.9
TPR.G14819 Trifolium pratense HOM05D000935 ORTHO05D019305 1.2e-19 100.9 128 41.4
RcHm_v2.0_Chr4g0409421 Rosa chinensis HOM05D005989 ORTHO05D000022 5.6e-17 92.0 133 36.1
TPR.G40800 Trifolium pratense HOM05D000003 ORTHO05D012124 1.6e-16 90.5 136 34.6
Atru.chr12.1874 Acer truncatum HOM05D000003 ORTHO05D000004 2.8e-16 89.7 184 32.6
Atru.chr4.578 Acer truncatum HOM05D000003 ORTHO05D000651 3.6e-16 89.4 184 32.6
TPR.G25732 Trifolium pratense HOM05D000003 ORTHO05D019305 4.8e-16 89.0 167 33.5
Atru.chr1.2142 Acer truncatum HOM05D000003 ORTHO05D000022 1.1e-15 87.8 184 32.1
RcHm_v2.0_Chr6g0278601 Rosa chinensis HOM05D000003 ORTHO05D000004 5.3e-15 85.5 136 30.9
Atru.chr3.1667 Acer truncatum HOM05D000003 ORTHO05D000004 6.9e-15 85.1 184 31.5
RcHm_v2.0_Chr2g0140031 Rosa chinensis HOM05D000003 ORTHO05D000004 9.0e-15 84.7 182 29.7
RcHm_v2.0_Chr3g0466111 Rosa chinensis HOM05D000003 ORTHO05D000004 2.0e-14 83.6 136 33.1
Lalb_Chr02g0160441 Lupinus albus HOM05D000003 ORTHO05D000004 3.4e-14 82.8 134 35.8
RcHm_v2.0_Chr7g0200601 Rosa chinensis HOM05D000003 ORTHO05D000651 4.5e-14 82.4 136 32.4
TPR.G24447 Trifolium pratense HOM05D000003 ORTHO05D000006 4.5e-14 82.4 160 31.2
TPR.G29168 Trifolium pratense HOM05D000003 ORTHO05D019305 7.6e-14 81.6 112 36.6
RcHm_v2.0_Chr2g0167951 Rosa chinensis HOM05D005989 ORTHO05D000022 1.9e-12 77.0 129 31.8
Lalb_Chr12g0209791 Lupinus albus HOM05D000003 ORTHO05D000004 9.3e-12 74.7 113 35.4
Psat3g175840 Pisum sativum HOM05D015237 ORTHO05D016348 9.3e-12 74.7 121 33.1
FvH4_6g09211 Fragaria vesca HOM05D000003 ORTHO05D000651 1.2e-11 74.3 194 25.3
RcHm_v2.0_Chr5g0018801 Rosa chinensis HOM05D000003 ORTHO05D000651 1.2e-11 74.3 136 33.8
Glyma.04G159050 Glycine max HOM05D015419 ORTHO05D000651 2.7e-11 73.2 132 29.5
RcHm_v2.0_Chr5g0077831 Rosa chinensis HOM05D005989 ORTHO05D011902 2.7e-11 73.2 164 26.8
FvH4_6g30102 Fragaria vesca HOM05D000003 ORTHO05D000004 6.0e-11 72.0 139 30.9
Atru.chr9.279 Acer truncatum HOM05D000003 ORTHO05D000022 1.0e-10 71.2 150 32.0
TPR.G12236 Trifolium pratense HOM05D000003 ORTHO05D000004 2.3e-10 70.1 112 33.9
Atru.chr7.328 Acer truncatum HOM05D000003 ORTHO05D000004 3.0e-10 69.7 149 30.9
Psat0s1432g0040 Pisum sativum HOM05D048817 ORTHO05D016348 3.0e-10 69.7 124 33.9
Aqoxy6G01821 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 5.1e-10 68.9 147 31.3
Psat1g057480 Pisum sativum HOM05D015197 ORTHO05D000651 6.7e-10 68.6 142 26.8
FvH4_5g38601 Fragaria vesca HOM05D000003 ORTHO05D000651 1.9e-09 67.0 135 31.1
RcHm_v2.0_Chr6g0301391 Rosa chinensis HOM05D000003 ORTHO05D000004 2.5e-09 66.6 167 28.1
Medtr4g031795 Medicago truncatula HOM05D015419 ORTHO05D011822 4.3e-09 65.9 80 40.0
Atru.chr4.574 Acer truncatum HOM05D000003 ORTHO05D000004 5.6e-09 65.5 141 30.5
Atru.chr3.1897 Acer truncatum HOM05D000003 ORTHO05D000651 9.6e-09 64.7 185 28.1
RcHm_v2.0_Chr7g0206171 Rosa chinensis HOM05D005989 ORTHO05D000022 9.6e-09 64.7 113 30.1
TPR.G689 Trifolium pratense HOM05D000003 ORTHO05D012124 1.3e-08 64.3 67 46.3
PSO764G0074 Papaver somniferum HOM05D000003 ORTHO05D000651 1.6e-08 63.9 130 30.8
Ca_24331_v3 Cicer arietinum L. HOM05D015419 ORTHO05D000651 4.8e-08 62.4 109 29.4
Aqoxy6G02677 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.2e-08 62.0 159 26.4
Medtr8g015630 Medicago truncatula HOM05D000003 ORTHO05D000004 6.2e-08 62.0 164 24.4
TPR.G35996 Trifolium pratense HOM05D000003 ORTHO05D012124 6.2e-08 62.0 131 28.2
Aa31LG7G12700 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.1e-08 61.6 145 31.7
Medtr3g052720 Medicago truncatula HOM05D000001 ORTHO05D000003 8.1e-08 61.6 106 34.0
PSO063G3358 Papaver somniferum HOM05D000003 ORTHO05D000004 8.1e-08 61.6 144 27.1
Psat5g220480 Pisum sativum HOM05D015237 ORTHO05D000022 8.1e-08 61.6 139 26.6
RcHm_v2.0_Chr4g0404571 Rosa chinensis HOM05D000003 ORTHO05D000004 8.1e-08 61.6 150 26.7
TPR.G17328 Trifolium pratense HOM05D000014 ORTHO05D000016 1.1e-07 61.2 66 37.9
Aqoxy3G01866 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 1.8e-07 60.5 130 32.3
Psat3g091600 Pisum sativum HOM05D000003 ORTHO05D000004 1.8e-07 60.5 106 33.0
PSO170G6243 Papaver somniferum HOM05D000003 ORTHO05D000004 3.1e-07 59.7 148 27.7
PSO339G6711 Papaver somniferum HOM05D000003 ORTHO05D000651 3.1e-07 59.7 159 24.5
Aqoxy4G00901 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 4.0e-07 59.3 147 29.3
Aa31LG9G5230 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.9e-07 58.5 143 28.7
TPR.G32542 Trifolium pratense HOM05D000003 ORTHO05D012124 6.9e-07 58.5 64 42.2
Aqoxy2G01857 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 9.0e-07 58.2 147 25.2
PSO339G2522 Papaver somniferum HOM05D000003 ORTHO05D000651 9.0e-07 58.2 136 26.5
Aqoxy2G01763 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 1.2e-06 57.8 146 28.1
BraA02t04989Z Brassica rapa HOM05D000003 ORTHO05D000925 1.2e-06 57.8 135 30.4
Sabra04G0049100 Salix brachista HOM05D000003 ORTHO05D000007 1.2e-06 57.8 132 31.1
TPR.G206 Trifolium pratense HOM05D015419 ORTHO05D012124 1.5e-06 57.4 62 40.3
Medtr7g029135 Medicago truncatula HOM05D022442 ORTHO05D036748 2.0e-06 57.0 70 38.6
Aqoxy7G02257 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.6e-06 56.6 148 25.7
Aqoxy5G02268 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 3.4e-06 56.2 196 24.0
PSO210G4338 Papaver somniferum HOM05D000003 ORTHO05D000004 3.4e-06 56.2 198 22.7
PSO339G3052 Papaver somniferum HOM05D000003 ORTHO05D000004 3.4e-06 56.2 155 29.7
Aa31LG7G3330 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.5e-06 55.8 154 28.6
Aqoxy2G01719 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 4.5e-06 55.8 128 28.9
Aqoxy3G01721 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 4.5e-06 55.8 140 23.6
PSO541G0757 Papaver somniferum HOM05D000003 ORTHO05D000004 4.5e-06 55.8 162 29.0
QL01p022100 Quercus lobata HOM05D000003 ORTHO05D000004 4.5e-06 55.8 153 28.1
Medtr4g025930 Medicago truncatula HOM05D015419 ORTHO05D016348 7.6e-06 55.1 68 36.8
PSO063G5365 Papaver somniferum HOM05D000003 ORTHO05D000004 7.6e-06 55.1 153 27.5
Atru.chr10.504 Acer truncatum HOM05D000003 ORTHO05D000022 9.9e-06 54.7 113 34.5
Aqoxy3G00755 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 9.9e-06 54.7 132 27.3
PSO761G0271 Papaver somniferum HOM05D000003 ORTHO05D000651 9.9e-06 54.7 131 30.5


User provided reference genes

Program Settings