Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g470180 Medicago truncatula HOM05D002777 ORTHO05D001516 0.0e+00 1080.1 539 100.0
Medtr7g108440 Medicago truncatula HOM05D002777 ORTHO05D001516 2.7e-31 141.0 195 46.2
Medtr5g065250 Medicago truncatula HOM05D002777 ORTHO05D001516 6.1e-31 139.8 194 41.8
Medtr1g033680 Medicago truncatula HOM05D002777 ORTHO05D001516 4.4e-29 133.7 192 39.6
Medtr4g061950 Medicago truncatula HOM05D002777 ORTHO05D001516 1.1e-27 129.0 199 38.7
Medtr2g103400 Medicago truncatula HOM05D002777 ORTHO05D001516 5.9e-26 123.2 208 38.9
Medtr5g055560 Medicago truncatula HOM05D002777 ORTHO05D001516 4.8e-20 103.6 152 44.1
Lj2g0014793 Lotus japonicus HOM05D002777 ORTHO05D001516 1.7e-17 95.1 199 30.2
Phvul.003G023200 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.2e-17 94.7 220 30.5
Lj3g0011764 Lotus japonicus HOM05D002777 ORTHO05D001516 3.8e-17 94.0 201 28.9
Phvul.001G088300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.5e-17 93.2 204 27.5
TPR.G18402 Trifolium pratense HOM05D002777 ORTHO05D001516 3.2e-16 90.9 220 28.6
Phvul.010G135050 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.2e-16 90.5 190 27.4
Lj1g0017175 Lotus japonicus HOM05D002777 ORTHO05D001516 7.2e-16 89.7 217 30.0
Lj2g0011520 Lotus japonicus HOM05D002777 ORTHO05D001516 2.7e-15 87.8 222 27.5
Phvul.009G011500 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.7e-15 87.0 208 26.9
Lj1g0014390 Lotus japonicus HOM05D002777 ORTHO05D001516 8.0e-15 86.3 213 25.8
Phvul.002G200500 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.4e-14 85.5 207 24.6
Lj6g0021963 Lotus japonicus HOM05D002777 ORTHO05D001516 2.3e-14 84.7 218 27.5
Lj6g0012162 Lotus japonicus HOM05D002777 ORTHO05D001516 3.0e-14 84.3 217 25.8
Phvul.001G161800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.0e-14 84.3 202 28.2
Phvul.010G072600 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.0e-14 84.3 190 30.5
Phvul.002G198900 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.0e-14 84.0 196 28.6
Phvul.011G176000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.0e-14 84.0 201 25.9
Lj2g0000568 Lotus japonicus HOM05D002777 ORTHO05D001516 6.8e-14 83.2 279 26.5
Phvul.010G029500 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.8e-14 83.2 192 26.0
Lj5g0001897 Lotus japonicus HOM05D002777 ORTHO05D001516 8.8e-14 82.8 193 30.6
Medtr5g041720 Medicago truncatula HOM05D002777 ORTHO05D001516 8.8e-14 82.8 98 40.8
Phvul.008G101400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 8.8e-14 82.8 202 24.8
Phvul.001G152700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.2e-13 82.4 197 27.4
Phvul.004G009401 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.0e-13 81.6 210 25.7
Glyma.20G003900 Glycine max HOM05D002777 ORTHO05D001516 2.6e-13 81.3 198 28.3
Phvul.L001950 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.6e-13 81.3 194 26.8
Lj2g0005575 Lotus japonicus HOM05D002777 ORTHO05D001516 4.4e-13 80.5 205 30.7
Medtr7g104745 Medicago truncatula HOM05D000003 ORTHO05D001516 4.4e-13 80.5 172 30.8
Phvul.002G122100 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.4e-13 80.5 153 32.7
Phvul.001G126500 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.7e-13 80.1 218 24.3
Phvul.008G129600 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.7e-13 80.1 177 27.7
Phvul.002G067600 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 9.8e-13 79.3 205 29.3
Phvul.003G099400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 9.8e-13 79.3 211 27.5
Lj3g0009896 Lotus japonicus HOM05D002777 ORTHO05D001516 1.3e-12 79.0 196 28.1
Lj4g0007213 Lotus japonicus HOM05D002777 ORTHO05D001516 1.7e-12 78.6 289 26.6
Phvul.010G078700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.7e-12 78.6 209 25.8
Phvul.002G096200 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.2e-12 78.2 194 27.3
Phvul.007G108700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.8e-12 77.8 190 29.5
LjContig00357g0023212 Lotus japonicus HOM05D002777 ORTHO05D001516 3.7e-12 77.4 215 25.1
Phvul.002G217700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.7e-12 77.4 190 29.5
Phvul.008G144313 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.7e-12 77.4 202 25.7
Phvul.010G047300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.7e-12 77.4 190 29.5
Phvul.005G131700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.3e-12 76.6 207 25.6
Phvul.010G036700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.3e-12 76.6 207 27.5
Lj5g0009491 Lotus japonicus HOM05D002777 ORTHO05D001516 8.3e-12 76.3 189 25.4
Phvul.007G107000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 8.3e-12 76.3 185 26.5
Phvul.009G005600 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 8.3e-12 76.3 204 26.5
Phvul.010G071200 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 8.3e-12 76.3 199 27.1
Lj2g0018386 Lotus japonicus HOM05D002777 ORTHO05D001516 1.1e-11 75.9 231 24.7
Phvul.008G166850 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.1e-11 75.9 215 25.6
Lj6g0024174 Lotus japonicus HOM05D002777 ORTHO05D001516 1.4e-11 75.5 200 26.0
Lj5g0003150 Lotus japonicus HOM05D002777 ORTHO05D001516 2.4e-11 74.7 217 25.8
Phvul.008G175000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.4e-11 74.7 202 30.7
Phvul.011G184000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.4e-11 74.7 216 24.1
Phvul.002G156300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.1e-11 74.3 189 23.8
Phvul.011G125000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.1e-11 74.3 205 27.3
Medtr0260s0020 Medicago truncatula HOM05D002777 ORTHO05D001516 4.1e-11 73.9 66 53.0
TPR.G19363 Trifolium pratense HOM05D002777 ORTHO05D001516 4.1e-11 73.9 229 25.8
Phvul.010G085400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.4e-11 73.6 214 25.7
Phvul.010G016100 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 7.0e-11 73.2 201 25.4
Phvul.006G011500 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 9.1e-11 72.8 182 28.6
Lj4g0013222 Lotus japonicus HOM05D002777 ORTHO05D001516 1.2e-10 72.4 199 27.1
Glyma.13G027700 Glycine max HOM05D002777 ORTHO05D001516 1.6e-10 72.0 206 28.2
Phvul.002G137200 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.6e-10 72.0 186 26.9
Lj4g0022516 Lotus japonicus HOM05D002777 ORTHO05D001516 3.5e-10 70.9 244 23.8
Phvul.001G122500 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.5e-10 70.5 184 26.1
Phvul.005G103000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 7.7e-10 69.7 202 26.2
Phvul.L005801 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 7.7e-10 69.7 216 24.1
Lj5g0007242 Lotus japonicus HOM05D002777 ORTHO05D001516 1.3e-09 68.9 189 28.0
Phvul.008G172900 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.3e-09 68.9 191 24.1
Lj2g0003501 Lotus japonicus HOM05D002777 ORTHO05D001516 1.7e-09 68.6 216 27.3
Phvul.006G023800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.8e-09 67.4 214 24.3
Phvul.005G063650 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.0e-09 67.0 205 23.9
Phvul.008G120900 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.0e-09 67.0 195 24.6
Glyma.06G268900 Glycine max HOM05D002777 ORTHO05D001516 6.6e-09 66.6 214 23.8
Glyma.05G115300 Glycine max HOM05D002777 ORTHO05D001516 1.1e-08 65.9 201 26.4
HanXRQChr01g0005411 Helianthus annuus HOM05D003915 ORTHO05D005386 4.2e-08 63.9 211 28.9
Medtr6g049090 Medicago truncatula HOM05D002777 ORTHO05D001516 9.5e-08 62.8 145 35.9
Phvul.001G122700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 9.5e-08 62.8 214 24.8
Phvul.001G065800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.2e-07 62.4 191 27.7
Phvul.001G154000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.2e-07 62.4 196 21.9
Psat2g045280 Pisum sativum HOM05D010469 ORTHO05D001516 1.6e-07 62.0 225 27.6
Psat5g142480 Pisum sativum HOM05D007807 ORTHO05D001516 1.6e-07 62.0 194 25.3
HanXRQChr03g0092381 Helianthus annuus HOM05D003915 ORTHO05D001516 2.1e-07 61.6 219 26.9
HanXRQChr08g0227851 Helianthus annuus HOM05D000003 ORTHO05D000004 2.1e-07 61.6 96 40.6
Phvul.010G066000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.1e-07 61.6 194 25.3
Lsat_1_v5_gn_6_82040 Lactuca sativa HOM05D003915 ORTHO05D001516 3.6e-07 60.8 198 26.3
Phvul.011G132400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.6e-07 60.8 211 24.6
Lj4g0008907 Lotus japonicus HOM05D002777 ORTHO05D001516 4.7e-07 60.5 77 36.4
Phvul.007G098300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.7e-07 60.5 177 28.8
Phvul.008G164400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 8.0e-07 59.7 187 23.5
Psat0ss6702g0200 Pisum sativum HOM05D007807 ORTHO05D001516 8.0e-07 59.7 224 25.0
Lsat_1_v5_gn_4_9381 Lactuca sativa HOM05D052455 ORTHO05D001516 1.0e-06 59.3 143 32.2
Lsat_1_v5_gn_6_74401 Lactuca sativa HOM05D003915 ORTHO05D005386 1.0e-06 59.3 173 27.2
Phvul.008G116900 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.0e-06 59.3 164 25.6
Lalb_Chr01g0012751 Lupinus albus HOM05D002777 ORTHO05D001516 1.8e-06 58.5 90 28.9
Phvul.002G142300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.8e-06 58.5 95 28.4
HanXRQChr03g0078981 Helianthus annuus HOM05D003915 ORTHO05D001516 4.0e-06 57.4 188 26.1
HanXRQChr11g0329921 Helianthus annuus HOM05D003915 ORTHO05D005386 4.0e-06 57.4 213 25.4
Lsat_1_v5_gn_1_29001 Lactuca sativa HOM05D020501 ORTHO05D001516 4.0e-06 57.4 185 24.3
Duzib170G0053 Durio zibethinus HOM05D037386 ORTHO05D035091 5.2e-06 57.0 170 27.6
Lsat_1_v5_gn_4_150521 Lactuca sativa HOM05D020501 ORTHO05D001516 5.2e-06 57.0 159 30.2
ECA247G3849 Erigeron canadensis HOM05D000031 ORTHO05D000030 6.8e-06 56.6 187 26.2
HanXRQChr15g0482051 Helianthus annuus HOM05D003915 ORTHO05D005386 6.8e-06 56.6 48 54.2
Lj4g0019066 Lotus japonicus HOM05D002777 ORTHO05D001516 6.8e-06 56.6 75 40.0
Phvul.010G077150 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.8e-06 56.6 95 25.3
HanXRQChr16g0525111 Helianthus annuus HOM05D003915 ORTHO05D005386 8.9e-06 56.2 60 46.7


User provided reference genes

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