Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g107150 Medicago truncatula HOM05D005730 ORTHO05D007038 4.0e-50 201.1 97 100.0
CDE02G1938 Ceratophyllum demersum HOM05D005730 ORTHO05D007038 1.7e-08 62.8 52 61.5
TPR.G21357 Trifolium pratense HOM05D005730 ORTHO05D007038 1.4e-07 59.7 33 84.8
Glyma.07G130200 Glycine max HOM05D005730 ORTHO05D007038 2.5e-07 58.9 32 84.4
Gohir.A03G029700 Gossypium hirsutum HOM05D005730 ORTHO05D007038 2.5e-07 58.9 32 84.4
Gohir.D03G138800 Gossypium hirsutum HOM05D005730 ORTHO05D007038 2.5e-07 58.9 32 84.4
Gorai.003G145600 Gossypium raimondii HOM05D005730 ORTHO05D007038 2.5e-07 58.9 32 84.4
Phvul.004G177400 Phaseolus vulgaris HOM05D005730 ORTHO05D007038 2.5e-07 58.9 32 84.4
Phvul.010G060700 Phaseolus vulgaris HOM05D005730 ORTHO05D007038 2.5e-07 58.9 32 84.4
Psat1g051120 Pisum sativum HOM05D005730 ORTHO05D007038 2.5e-07 58.9 33 81.8
VMungo0464G0384 Vigna mungo HOM05D002151 ORTHO05D002142 2.5e-07 58.9 32 84.4
arahy.Tifrunner.gnm1.ann1.8U1ME7 Arachis hypogaea HOM05D005730 ORTHO05D007038 3.2e-07 58.5 32 81.2
arahy.Tifrunner.gnm1.ann1.YLZA1F Arachis hypogaea HOM05D005730 ORTHO05D007038 3.2e-07 58.5 32 81.2
CDE06G0649 Ceratophyllum demersum HOM05D005730 ORTHO05D007038 7.2e-07 57.4 43 65.1
Eucgr.D02622 Eucalyptus grandis HOM05D005730 ORTHO05D007038 7.2e-07 57.4 32 78.1
Lj2g0002952 Lotus japonicus HOM05D005730 ORTHO05D007038 1.6e-06 56.2 32 84.4
Lalb_Chr14g0361711 Lupinus albus HOM05D005730 ORTHO05D007038 1.6e-06 56.2 32 78.1
FvH4_4g06270 Fragaria vesca HOM05D005730 ORTHO05D007038 2.1e-06 55.8 32 81.2
FAN12G2290 Fragaria x ananassa HOM05D005730 ORTHO05D007038 2.1e-06 55.8 32 81.2
PGR142G0999 Punica granatum HOM05D005730 ORTHO05D007038 2.1e-06 55.8 32 81.2
RcHm_v2.0_Chr4g0397991 Rosa chinensis HOM05D005730 ORTHO05D007038 2.1e-06 55.8 32 81.2
CANSAT01G0847 Cannabis sativa HOM05D005730 ORTHO05D007038 2.7e-06 55.5 30 76.7
SGA_v2.0_scaffold143G35734 Striga asiatica HOM05D005730 ORTHO05D007038 2.7e-06 55.5 32 81.2
Thecc.06G194900 Theobroma cacao HOM05D005730 ORTHO05D007038 2.7e-06 55.5 30 83.3
CiPaw.16G103100 Carya illinoinensis HOM05D005730 ORTHO05D007038 3.6e-06 55.1 32 78.1
Cc00_g00480 Coffea canephora HOM05D005730 ORTHO05D007038 3.6e-06 55.1 32 75.0
Aqoxy7G02690 Aquilegia oxysepala HOM05D005730 ORTHO05D007038 4.6e-06 54.7 32 78.1
Os01g0750800 Oryza sativa ssp. japonica HOM05D005730 ORTHO05D007038 4.6e-06 54.7 30 80.0
THA.LOC104815318 Tarenaya hassleriana HOM05D005730 ORTHO05D007038 4.6e-06 54.7 32 78.1
THA.LOC109116496 Tarenaya hassleriana HOM05D005730 ORTHO05D007038 4.6e-06 54.7 32 78.1
THA.LOC109117265 Tarenaya hassleriana HOM05D005730 ORTHO05D007038 4.6e-06 54.7 32 78.1
Zm00001eb368480 Zea mays HOM05D005730 ORTHO05D007038 4.6e-06 54.7 30 80.0
Cfa020734 Carpinus fangiana HOM05D005730 ORTHO05D007038 6.1e-06 54.3 32 81.2
MELO3C017388.2 Cucumis melo HOM05D005730 ORTHO05D007038 6.1e-06 54.3 32 81.2
CsaV3_1G004610 Cucumis sativus L. HOM05D005730 ORTHO05D007038 6.1e-06 54.3 32 81.2
Duzib170G0040 Durio zibethinus HOM05D005730 ORTHO05D007038 6.1e-06 54.3 32 75.0
MD16G1239700 Malus domestica HOM05D005730 ORTHO05D007038 6.1e-06 54.3 32 75.0
Os01g0732100 Oryza sativa ssp. japonica HOM05D005730 ORTHO05D007038 6.1e-06 54.3 30 80.0
Prupe.1G065800 Prunus persica HOM05D005730 ORTHO05D007038 6.1e-06 54.3 32 75.0
QL11p009271 Quercus lobata HOM05D005730 ORTHO05D007038 6.1e-06 54.3 32 81.2
Sed0021240 Sechium edule HOM05D005730 ORTHO05D007038 6.1e-06 54.3 32 81.2
Duzib177G0654 Durio zibethinus HOM05D005730 ORTHO05D007038 7.9e-06 53.9 32 78.1
PSO063G5181 Papaver somniferum HOM05D005730 ORTHO05D007038 7.9e-06 53.9 45 57.8
Sc09g0007480 Simmondsia chinensis HOM05D005730 ORTHO05D007038 7.9e-06 53.9 30 80.0
unitig_26.g9132 Utricularia gibba HOM05D005730 ORTHO05D007038 7.9e-06 53.9 32 75.0


User provided reference genes

Program Settings