Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g107110 Medicago truncatula HOM05D015243 ORTHO05D000203 1.9e-23 113.2 166 100.0
Ca_17196_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000203 1.0e-13 80.9 60 71.7
TPR.G1416 Trifolium pratense HOM05D002159 ORTHO05D007297 8.8e-13 77.8 58 72.4
Lj4g0017928 Lotus japonicus HOM05D015243 ORTHO05D000203 1.1e-12 77.4 63 68.3
Glyma.08G053500 Glycine max HOM05D000135 ORTHO05D000203 2.0e-12 76.6 56 73.2
Phvul.002G329300 Phaseolus vulgaris HOM05D000135 ORTHO05D000203 7.4e-12 74.7 65 66.2
Glyma.05G245600 Glycine max HOM05D000135 ORTHO05D000203 2.8e-11 72.8 56 71.4
VMungo0251G3734 Vigna mungo HOM05D000135 ORTHO05D000203 3.7e-11 72.4 53 69.8
Psat7g002360 Pisum sativum HOM05D015243 ORTHO05D000203 1.5e-09 67.0 45 73.3
ClCG06G014370 Citrullus lanatus HOM05D000135 ORTHO05D000203 2.6e-09 66.2 65 53.8
Hma1.2p1_0669F.1_g200160 Hydrangea macrophylla HOM05D000135 ORTHO05D000203 1.0e-08 64.3 54 61.1
Lalb_Chr09g0330421 Lupinus albus HOM05D000135 ORTHO05D000203 1.7e-08 63.5 56 64.3
Sed0000275 Sechium edule HOM05D000135 ORTHO05D000203 1.7e-08 63.5 55 54.5
Dinv26572 Davidia involucrata HOM05D000135 ORTHO05D000203 5.0e-08 62.0 54 61.1
Medtr6g079570 Medicago truncatula HOM05D000135 ORTHO05D000203 5.0e-08 62.0 60 58.3
EL10Ac1g00489 Beta vulgaris HOM05D000135 ORTHO05D000203 8.5e-08 61.2 51 58.8
Sed0026410 Sechium edule HOM05D000135 ORTHO05D000203 1.9e-07 60.1 55 56.4
CAN.G423.28 Capsicum annuum HOM05D000135 ORTHO05D000203 3.2e-07 59.3 46 63.0
DCAR_010743 Daucus carota HOM05D000135 ORTHO05D000203 4.2e-07 58.9 43 60.5
Sc12g0007170 Simmondsia chinensis HOM05D000135 ORTHO05D000203 4.2e-07 58.9 59 50.8
COL.COLO4_35380 Corchorus olitorius HOM05D000135 ORTHO05D000203 5.5e-07 58.5 53 52.8
Manes.14G170600 Manihot esculenta HOM05D000135 ORTHO05D000203 5.5e-07 58.5 54 57.4
Ah.05g171470 Amaranthus hybridus HOM05D000135 ORTHO05D000203 7.2e-07 58.2 40 67.5
Haze_18836 Corylus avellana HOM05D000135 ORTHO05D000203 7.2e-07 58.2 55 58.2
HanXRQChr15g0477721 Helianthus annuus HOM05D000135 ORTHO05D000203 7.2e-07 58.2 48 56.2
VMungo0464G2017 Vigna mungo HOM05D000135 ORTHO05D000203 7.2e-07 58.2 39 69.2
Cfa019671 Carpinus fangiana HOM05D000135 ORTHO05D000203 9.4e-07 57.8 55 60.0
Glyma.07G101100 Glycine max HOM05D000135 ORTHO05D000203 9.4e-07 57.8 62 53.2
CiPaw.15G142300 Carya illinoinensis HOM05D000135 ORTHO05D000203 1.2e-06 57.4 56 57.1
Nitab4.5_0003968g0020 Nicotiana tabacum HOM05D000135 ORTHO05D000203 1.2e-06 57.4 54 51.9
GSVIVG01008421001 Vitis vinifera HOM05D000135 ORTHO05D000203 1.2e-06 57.4 43 62.8
CSS0002278 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000203 1.6e-06 57.0 56 51.8
Nitab4.5_0011970g0010 Nicotiana tabacum HOM05D000135 ORTHO05D000203 1.6e-06 57.0 45 62.2
Aqoxy3G04020 Aquilegia oxysepala HOM05D000135 ORTHO05D000203 2.1e-06 56.6 45 62.2
Ca_25313_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000203 2.1e-06 56.6 42 64.3
COL.COLO4_30130 Corchorus olitorius HOM05D000135 ORTHO05D000203 2.1e-06 56.6 53 50.9
Nitab4.5_0009467g0010 Nicotiana tabacum HOM05D000135 ORTHO05D000203 2.1e-06 56.6 42 64.3
Peaxi162Scf00683g00043 Petunia axillaris HOM05D000135 ORTHO05D000203 2.1e-06 56.6 56 50.0
Cpa.g.sc3.406 Carica papaya HOM05D000135 ORTHO05D000203 2.7e-06 56.2 42 57.1
Ciclev10013012m.g Citrus clementina HOM05D000135 ORTHO05D000203 3.6e-06 55.8 37 67.6
Potri.015G039500 Populus trichocarpa HOM05D015243 ORTHO05D023094 4.7e-06 55.5 54 53.7
CSS0033163 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000203 6.1e-06 55.1 56 50.0
MELO3C017353.2 Cucumis melo HOM05D000135 ORTHO05D000203 6.1e-06 55.1 60 55.0
Migut.I00446 Erythranthe guttata HOM05D000135 ORTHO05D000203 6.1e-06 55.1 48 56.2
Sabra15G0038600 Salix brachista HOM05D015243 ORTHO05D023094 6.1e-06 55.1 54 53.7
Thecc.03G053900 Theobroma cacao HOM05D000135 ORTHO05D000203 6.1e-06 55.1 56 51.8
Manes.06G007600 Manihot esculenta HOM05D000135 ORTHO05D000203 7.9e-06 54.7 45 53.3
vmacro22374 Vaccinium macrocarpon HOM05D000135 ORTHO05D000203 7.9e-06 54.7 40 57.5
vmacro22896 Vaccinium macrocarpon HOM05D000135 ORTHO05D000203 7.9e-06 54.7 40 57.5


User provided reference genes

Program Settings