Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g104370 Medicago truncatula HOM05D000659 ORTHO05D000505 5.5e-35 150.2 66 100.0
TPR.G17398 Trifolium pratense HOM05D000659 ORTHO05D000505 3.1e-09 64.7 43 60.5
Glyma.20G156400 Glycine max HOM05D000659 ORTHO05D000505 4.4e-08 60.8 43 58.1
Ca_10788_v3 Cicer arietinum L. HOM05D000659 ORTHO05D000505 1.7e-07 58.9 43 53.5
Glyma.10G238200 Glycine max HOM05D000659 ORTHO05D000505 2.9e-07 58.2 43 55.8
Medtr1g101310 Medicago truncatula HOM05D000659 ORTHO05D000505 8.3e-07 56.6 42 54.8
Phvul.007G067300 Phaseolus vulgaris HOM05D000659 ORTHO05D000505 1.4e-06 55.8 43 53.5
VMungo0720G3167 Vigna mungo HOM05D000659 ORTHO05D000505 1.4e-06 55.8 43 53.5
TAR374G0080 Trochodendron aralioides HOM05D000659 ORTHO05D000505 1.9e-06 55.5 43 48.8
Gorai.001G171200 Gossypium raimondii HOM05D000659 ORTHO05D000505 2.4e-06 55.1 58 44.8
Lj2g0005987 Lotus japonicus HOM05D000659 ORTHO05D000505 2.4e-06 55.1 43 48.8
SalBow1G2322 Salvia bowleyana HOM05D000659 ORTHO05D000505 2.4e-06 55.1 43 51.2
Solyc08g080500.3 Solanum lycopersicum HOM05D000659 ORTHO05D000505 2.4e-06 55.1 43 51.2
Sopen08g028820 Solanum pennellii HOM05D000659 ORTHO05D000505 2.4e-06 55.1 43 51.2
PGSC0003DMG400003050 Solanum tuberosum HOM05D000659 ORTHO05D000505 2.4e-06 55.1 43 51.2
Psat6g199120 Pisum sativum HOM05D000659 ORTHO05D000505 3.2e-06 54.7 40 55.0
MSTRG.1890 Avicennia marina HOM05D000659 ORTHO05D000505 5.4e-06 53.9 43 48.8
Dinv37678 Davidia involucrata HOM05D000659 ORTHO05D000505 5.4e-06 53.9 43 46.5
arahy.Tifrunner.gnm1.ann1.REVT0J Arachis hypogaea HOM05D000659 ORTHO05D000505 7.0e-06 53.5 43 51.2
arahy.Tifrunner.gnm1.ann1.S40QI3 Arachis hypogaea HOM05D000659 ORTHO05D000505 7.0e-06 53.5 43 51.2
C09p15970 Brassica napus HOM05D000659 ORTHO05D000505 7.0e-06 53.5 43 48.8
CAN.G981.15 Capsicum annuum HOM05D000659 ORTHO05D000505 7.0e-06 53.5 43 48.8
ClCG00G000250 Citrullus lanatus HOM05D000659 ORTHO05D000505 7.0e-06 53.5 43 48.8
ClCG00G003610 Citrullus lanatus HOM05D000659 ORTHO05D000505 7.0e-06 53.5 43 48.8
ClCG01G003060 Citrullus lanatus HOM05D000659 ORTHO05D000505 7.0e-06 53.5 58 41.4
ClCG10G003510 Citrullus lanatus HOM05D000659 ORTHO05D000505 7.0e-06 53.5 43 48.8
MELO3C005637.2 Cucumis melo HOM05D000659 ORTHO05D000505 7.0e-06 53.5 43 44.2
MELO3C014019.2 Cucumis melo HOM05D000659 ORTHO05D000505 7.0e-06 53.5 43 48.8
CsaV3_3G003520 Cucumis sativus L. HOM05D000659 ORTHO05D000505 7.0e-06 53.5 43 48.8
Glyma.09G143800 Glycine max HOM05D000659 ORTHO05D000505 7.0e-06 53.5 43 51.2
Glyma.16G196800 Glycine max HOM05D000659 ORTHO05D000505 7.0e-06 53.5 43 51.2
Oeu062740.1 Olea europaea HOM05D000659 ORTHO05D000505 7.0e-06 53.5 43 48.8
Phvul.004G120400 Phaseolus vulgaris HOM05D000659 ORTHO05D000505 7.0e-06 53.5 43 46.5
SalBow5G1448 Salvia bowleyana HOM05D000659 ORTHO05D000505 7.0e-06 53.5 41 51.2
CiPaw.12G097400 Carya illinoinensis HOM05D000659 ORTHO05D000505 9.2e-06 53.1 43 48.8
Dinv35190 Davidia involucrata HOM05D000659 ORTHO05D000505 9.2e-06 53.1 43 46.5
PSO478G3726 Papaver somniferum HOM05D000659 ORTHO05D000505 9.2e-06 53.1 43 46.5
PSO782G1810 Papaver somniferum HOM05D000659 ORTHO05D000505 9.2e-06 53.1 43 46.5
SalBow6G7133 Salvia bowleyana HOM05D000659 ORTHO05D000505 9.2e-06 53.1 43 48.8
Sed0016891 Sechium edule HOM05D000659 ORTHO05D000505 9.2e-06 53.1 43 48.8


User provided reference genes

Program Settings