Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g099690 Medicago truncatula HOM05D002545 ORTHO05D002335 6.1e-114 414.1 195 100.0
Medtr3g448400 Medicago truncatula HOM05D000003 ORTHO05D000004 4.3e-43 178.7 170 57.6
Medtr5g074450 Medicago truncatula HOM05D002545 ORTHO05D002335 3.2e-38 162.5 96 76.0
Medtr6g033030 Medicago truncatula HOM05D002545 ORTHO05D002335 1.3e-36 157.1 130 65.4
Medtr3g011980 Medicago truncatula HOM05D002545 ORTHO05D002335 8.6e-36 154.5 93 76.3
Medtr7g103360 Medicago truncatula HOM05D002545 ORTHO05D002335 9.9e-32 141.0 127 61.4
Medtr3g081050 Medicago truncatula HOM05D002545 ORTHO05D002335 1.7e-31 140.2 165 51.5
Medtr0912s0020 Medicago truncatula HOM05D002545 ORTHO05D002335 8.1e-26 121.3 92 62.0
Medtr3g051920 Medicago truncatula HOM05D002545 ORTHO05D002335 1.5e-24 117.1 88 67.0
Medtr6g088675 Medicago truncatula HOM05D002545 ORTHO05D002335 2.0e-24 116.7 95 60.0
Medtr7g065810 Medicago truncatula HOM05D002545 ORTHO05D002335 5.8e-24 115.2 130 50.8
Medtr6g034090 Medicago truncatula HOM05D002545 ORTHO05D002335 9.9e-24 114.4 137 51.8
Medtr0002s0880 Medicago truncatula HOM05D002545 ORTHO05D002335 2.9e-23 112.8 93 62.4
Medtr3g040600 Medicago truncatula HOM05D002545 ORTHO05D002335 2.4e-22 109.8 93 58.1
Medtr4g113395 Medicago truncatula HOM05D002545 ORTHO05D002335 4.2e-22 109.0 133 42.9
Medtr0043s0050 Medicago truncatula HOM05D002545 ORTHO05D002335 9.3e-22 107.8 93 55.9
Medtr3g462420 Medicago truncatula HOM05D002545 ORTHO05D002335 1.6e-21 107.1 92 59.8
TPR.G2927 Trifolium pratense HOM05D002545 ORTHO05D002335 1.0e-20 104.4 96 56.2
Medtr4g076130 Medicago truncatula HOM05D002545 ORTHO05D002335 1.6e-18 97.1 93 49.5
Medtr6g013950 Medicago truncatula HOM05D002545 ORTHO05D002335 2.1e-18 96.7 93 52.7
Medtr3g093740 Medicago truncatula HOM05D002545 ORTHO05D002335 4.8e-18 95.5 133 39.1
Medtr8g058405 Medicago truncatula HOM05D002545 ORTHO05D002335 1.4e-17 94.0 89 48.3
Medtr6g011520 Medicago truncatula HOM05D002545 ORTHO05D002335 4.0e-17 92.4 91 47.3
TPR.G1151 Trifolium pratense HOM05D002545 ORTHO05D002335 9.0e-17 91.3 87 50.6
Medtr8g071930 Medicago truncatula HOM05D002545 ORTHO05D002335 1.2e-16 90.9 104 48.1
Medtr4g056980 Medicago truncatula HOM05D002545 ORTHO05D002335 1.5e-16 90.5 111 43.2
Medtr7g057840 Medicago truncatula HOM05D002545 ORTHO05D002335 4.5e-16 89.0 78 55.1
Medtr3g104590 Medicago truncatula HOM05D002545 ORTHO05D002335 7.6e-16 88.2 76 52.6
Medtr2g038700 Medicago truncatula HOM05D000003 ORTHO05D002335 9.9e-16 87.8 120 45.0
Medtr4g415380 Medicago truncatula HOM05D002545 ORTHO05D002335 1.7e-15 87.0 77 55.8
Medtr7g050660 Medicago truncatula HOM05D002545 ORTHO05D000004 4.9e-15 85.5 140 36.4
Medtr4g052370 Medicago truncatula HOM05D002545 ORTHO05D002335 6.4e-15 85.1 83 53.0
Medtr3g085120 Medicago truncatula HOM05D002545 ORTHO05D002335 1.1e-14 84.3 93 48.4
Medtr1g094270 Medicago truncatula HOM05D002545 ORTHO05D002335 1.9e-14 83.6 87 47.1
Medtr4g094385 Medicago truncatula HOM05D002545 ORTHO05D002335 3.2e-14 82.8 93 44.1
TPR.G36671 Trifolium pratense HOM05D002545 ORTHO05D002335 4.2e-14 82.4 79 53.2
Medtr2g048730 Medicago truncatula HOM05D002545 ORTHO05D002335 1.6e-13 80.5 167 28.7
Medtr3g023500 Medicago truncatula HOM05D002545 ORTHO05D002335 6.0e-13 78.6 153 33.3
Medtr8g079590 Medicago truncatula HOM05D002545 ORTHO05D002335 2.3e-12 76.6 48 66.7
Medtr6g037960 Medicago truncatula HOM05D002545 ORTHO05D002335 3.9e-12 75.9 58 60.3
TPR.G36226 Trifolium pratense HOM05D002545 ORTHO05D002335 8.7e-12 74.7 68 52.9
CSS0011592 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.5e-11 73.9 137 34.3
Medtr1g044185 Medicago truncatula HOM05D002545 ORTHO05D002335 1.5e-11 73.9 113 38.1
Medtr5g063315 Medicago truncatula HOM05D002545 ORTHO05D002335 1.9e-11 73.6 107 43.9
Medtr6g006375 Medicago truncatula HOM05D000003 ORTHO05D000004 2.5e-11 73.2 159 35.8
Medtr1g035030 Medicago truncatula HOM05D002545 ORTHO05D002335 3.3e-11 72.8 91 47.3
Medtr8g079000 Medicago truncatula HOM05D002545 ORTHO05D002335 3.3e-11 72.8 58 56.9
Medtr4g054990 Medicago truncatula HOM05D002545 ORTHO05D002335 4.3e-11 72.4 33 87.9
Medtr5g041190 Medicago truncatula HOM05D002545 ORTHO05D002335 4.3e-11 72.4 42 64.3
Medtr5g091750 Medicago truncatula HOM05D002545 ORTHO05D002335 5.6e-11 72.0 86 37.2
Oeu005734.1 Olea europaea HOM05D000003 ORTHO05D000004 5.6e-11 72.0 121 38.8
ECA240G2493 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.3e-10 70.9 134 32.1
TPR.G36309 Trifolium pratense HOM05D002545 ORTHO05D002335 1.3e-10 70.9 73 49.3
Medtr6g086200 Medicago truncatula HOM05D002545 ORTHO05D002335 1.6e-10 70.5 119 40.3
TPR.G37514 Trifolium pratense HOM05D002545 ORTHO05D002335 2.8e-10 69.7 190 27.4
Medtr6g070940 Medicago truncatula HOM05D002545 ORTHO05D002335 4.8e-10 68.9 85 41.2
Medtr7g081765 Medicago truncatula HOM05D002545 ORTHO05D002335 6.2e-10 68.6 98 38.8
CSS0022804 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-09 67.8 167 30.5
TPR.G7283 Trifolium pratense HOM05D002545 ORTHO05D002335 1.1e-09 67.8 65 47.7
Lalb_Chr07g0183091 Lupinus albus HOM05D000003 ORTHO05D000004 1.8e-09 67.0 197 30.5
Lalb_Chr21g0309771 Lupinus albus HOM05D000003 ORTHO05D000004 1.8e-09 67.0 169 26.6
Medtr1g014988 Medicago truncatula HOM05D002545 ORTHO05D002335 1.8e-09 67.0 108 35.2
SHI09341 Sapria himalayana HOM05D000003 ORTHO05D000004 4.0e-09 65.9 165 29.7
SHI29190 Sapria himalayana HOM05D000003 ORTHO05D000004 4.0e-09 65.9 165 29.7
SHI23487 Sapria himalayana HOM05D000003 ORTHO05D000004 6.9e-09 65.1 165 29.7
CSS0025653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-08 64.3 101 36.6
Cpa.g.sc47.54 Carica papaya HOM05D000003 ORTHO05D000004 1.2e-08 64.3 97 37.1
CSS0030874 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-08 63.5 126 34.9
Medtr6g034785 Medicago truncatula HOM05D002545 ORTHO05D002335 2.0e-08 63.5 78 43.6
Medtr1g100385 Medicago truncatula HOM05D000003 ORTHO05D000004 3.4e-08 62.8 230 25.2
Medtr6g079500 Medicago truncatula HOM05D002545 ORTHO05D002335 3.4e-08 62.8 81 40.7
Oeu001026.1 Olea europaea HOM05D000003 ORTHO05D000004 4.5e-08 62.4 122 36.9
Aqoxy2G01919 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.8e-08 62.0 195 28.2
ECA233G0876 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.8e-08 62.0 146 31.5
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 5.8e-08 62.0 149 27.5
QL11p024822 Quercus lobata HOM05D000003 ORTHO05D000004 5.8e-08 62.0 169 32.0
Atru.chr2.451 Acer truncatum HOM05D000003 ORTHO05D000004 7.6e-08 61.6 116 35.3
HanXRQChr09g0261431 Helianthus annuus HOM05D000003 ORTHO05D000004 1.3e-07 60.8 192 24.5
SHI26093 Sapria himalayana HOM05D000003 ORTHO05D000004 1.3e-07 60.8 171 28.1
Medtr3g031290 Medicago truncatula HOM05D002545 ORTHO05D002335 1.7e-07 60.5 39 64.1
QL06p016008 Quercus lobata HOM05D003860 ORTHO05D004218 1.7e-07 60.5 92 32.6
Cpa.g.sc111.42 Carica papaya HOM05D000003 ORTHO05D000004 2.2e-07 60.1 92 35.9
Medtr1g026690 Medicago truncatula HOM05D000003 ORTHO05D000004 2.2e-07 60.1 172 26.7
TPR.G9826 Trifolium pratense HOM05D002545 ORTHO05D002335 2.2e-07 60.1 63 44.4
CSS0028483 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.9e-07 59.7 96 29.2
FvH4_2g04886 Fragaria vesca HOM05D000003 ORTHO05D000004 2.9e-07 59.7 138 30.4
Medtr0376s0020 Medicago truncatula HOM05D000181 ORTHO05D003134 2.9e-07 59.7 67 41.8
TPR.G27496 Trifolium pratense HOM05D000003 ORTHO05D000004 2.9e-07 59.7 130 29.2
Aqoxy2G01708 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.9e-07 58.9 166 30.7
CSS0005407 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.9e-07 58.9 153 30.7
HanXRQChr08g0217951 Helianthus annuus HOM05D000003 ORTHO05D000004 4.9e-07 58.9 193 23.3
Medtr4g122170 Medicago truncatula HOM05D002545 ORTHO05D002335 4.9e-07 58.9 41 56.1
Medtr5g095580 Medicago truncatula HOM05D002545 ORTHO05D002335 4.9e-07 58.9 57 49.1
Medtr6g461940 Medicago truncatula HOM05D000003 ORTHO05D000004 4.9e-07 58.9 36 86.1
TPR.G17841 Trifolium pratense HOM05D001331 ORTHO05D001157 4.9e-07 58.9 115 34.8
TAR476G0004 Trochodendron aralioides HOM05D000003 ORTHO05D000004 4.9e-07 58.9 98 35.7
Medtr1350s0010 Medicago truncatula HOM05D000003 ORTHO05D000004 6.5e-07 58.5 36 86.1
QL03p020243 Quercus lobata HOM05D000003 ORTHO05D000004 6.5e-07 58.5 188 29.8
Aqoxy3G01491 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 8.4e-07 58.2 97 32.0
Medtr4g037595 Medicago truncatula HOM05D026244 ORTHO05D000004 8.4e-07 58.2 107 40.2
Medtr7g102890 Medicago truncatula HOM05D002545 ORTHO05D002335 8.4e-07 58.2 67 40.3
Oeu024647.1 Olea europaea HOM05D000003 ORTHO05D000004 8.4e-07 58.2 78 42.3
Aqoxy4G01023 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.1e-06 57.8 97 32.0
Cpa.g.sc43.118 Carica papaya HOM05D004758 ORTHO05D006063 1.1e-06 57.8 91 37.4
ECA236G5046 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.1e-06 57.8 108 28.7
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 1.1e-06 57.8 192 25.0
MBI18_g01966_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.1e-06 57.8 163 28.2
QL02p013964 Quercus lobata HOM05D005066 ORTHO05D006138 1.1e-06 57.8 149 26.8
QL05p086823 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-06 57.8 194 25.8
SHI45326 Sapria himalayana HOM05D000003 ORTHO05D000004 1.1e-06 57.8 187 26.2
SHI47243 Sapria himalayana HOM05D000003 ORTHO05D000004 1.1e-06 57.8 187 26.2
Atru.chr4.1942 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-06 57.4 151 28.5
Cpa.g.sc139.50 Carica papaya HOM05D000003 ORTHO05D000004 1.4e-06 57.4 144 25.7
ECA236G1770 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.4e-06 57.4 84 33.3
ECA247G1118 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.4e-06 57.4 185 25.9
Medtr2g090750 Medicago truncatula HOM05D000003 ORTHO05D000004 1.4e-06 57.4 188 22.3
Medtr4g060705 Medicago truncatula HOM05D002545 ORTHO05D002335 1.4e-06 57.4 63 41.3
CSS0001040 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.9e-06 57.0 92 33.7
Cpa.g.sc1.274 Carica papaya HOM05D000003 ORTHO05D000004 1.9e-06 57.0 95 33.7
ECA247G0882 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.9e-06 57.0 158 28.5
Medtr6g016175 Medicago truncatula HOM05D000003 ORTHO05D000006 1.9e-06 57.0 51 54.9
Oeu049517.3 Olea europaea HOM05D001787 ORTHO05D000004 1.9e-06 57.0 94 36.2
PSO384G3874 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-06 57.0 140 30.0
QL03p039930 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-06 57.0 98 29.6
QL12p026404 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-06 57.0 194 25.8
CSS0014297 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.5e-06 56.6 79 34.2
Medtr0061s0090 Medicago truncatula HOM05D000003 ORTHO05D000004 2.5e-06 56.6 36 80.6
QL01p030508 Quercus lobata HOM05D000003 ORTHO05D000004 2.5e-06 56.6 169 29.6
Cpa.g.sc162.12 Carica papaya HOM05D000003 ORTHO05D000004 3.2e-06 56.2 148 29.7
Medtr2g076890 Medicago truncatula HOM05D002545 ORTHO05D002335 3.2e-06 56.2 47 46.8
CSS0007080 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.2e-06 55.8 129 31.0
CSS0011287 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.2e-06 55.8 172 27.9
ECA247G3751 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.2e-06 55.8 204 26.0
QL02p033301 Quercus lobata HOM05D000003 ORTHO05D000004 4.2e-06 55.8 198 24.2
QL06p038224 Quercus lobata HOM05D000003 ORTHO05D000004 4.2e-06 55.8 192 28.1
CSS0030446 Camellia sinensis var. sinensis HOM05D003750 ORTHO05D004337 5.5e-06 55.5 98 28.6
Cpa.g.sc76.45 Carica papaya HOM05D000003 ORTHO05D000004 5.5e-06 55.5 100 29.0
ECA236G3617 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.5e-06 55.5 165 28.5
Medtr8g015330 Medicago truncatula HOM05D002545 ORTHO05D002335 5.5e-06 55.5 52 46.2
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 5.5e-06 55.5 92 30.4
SHI14108 Sapria himalayana HOM05D002164 ORTHO05D000004 5.5e-06 55.5 188 24.5
HanXRQChr04g0113211 Helianthus annuus HOM05D000003 ORTHO05D000004 7.1e-06 55.1 192 24.5
MBI04_g23905_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 7.1e-06 55.1 194 23.2
CSS0003615 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.3e-06 54.7 102 28.4
Cpa.g.sc3.188 Carica papaya HOM05D003018 ORTHO05D003402 9.3e-06 54.7 180 26.7
Cpa.g.sc7.229 Carica papaya HOM05D000003 ORTHO05D000004 9.3e-06 54.7 92 32.6
ECA232G4624 Erigeron canadensis HOM05D000003 ORTHO05D000004 9.3e-06 54.7 85 35.3
HanXRQChr06g0177091 Helianthus annuus HOM05D000003 ORTHO05D000004 9.3e-06 54.7 199 23.1


User provided reference genes

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