Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g099475 Medicago truncatula HOM05D007727 ORTHO05D009078 1.0e-61 240.0 127 100.0
Medtr8g099485 Medicago truncatula HOM05D007727 ORTHO05D009078 3.4e-41 171.8 126 74.6
TPR.G3425 Trifolium pratense HOM05D007727 ORTHO05D009078 9.0e-34 147.1 117 75.2
TPR.G3415 Trifolium pratense HOM05D007727 ORTHO05D009078 4.5e-33 144.8 117 74.4
TPR.G11121 Trifolium pratense HOM05D007727 ORTHO05D009078 1.4e-31 139.8 121 75.2
TPR.G3394 Trifolium pratense HOM05D007727 ORTHO05D009078 3.2e-31 138.7 120 74.2
Glyma.08G022800 Glycine max HOM05D007727 ORTHO05D009078 1.1e-20 103.6 120 57.5
Lj4g0015473 Lotus japonicus HOM05D007727 ORTHO05D009078 2.8e-19 99.0 118 50.8
Glyma.05G216900 Glycine max HOM05D007727 ORTHO05D009078 4.8e-19 98.2 121 55.4
Glyma.08G023200 Glycine max HOM05D007727 ORTHO05D009078 1.1e-18 97.1 121 55.4
Phvul.002G298600 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 6.9e-18 94.4 129 50.4
Phvul.002G298200 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 1.5e-17 93.2 121 52.9
Glyma.05G217200 Glycine max HOM05D007727 ORTHO05D009078 3.4e-17 92.0 114 56.1
Lj4g0008549 Lotus japonicus HOM05D007727 ORTHO05D009078 1.0e-16 90.5 118 52.5
VMungo0251G2989 Vigna mungo HOM05D007727 ORTHO05D009078 2.2e-16 89.4 117 52.1
Lalb_Chr05g0224131 Lupinus albus HOM05D007727 ORTHO05D009078 5.0e-16 88.2 121 52.1
Glyma.11G017500 Glycine max HOM05D007727 ORTHO05D009078 1.9e-15 86.3 115 46.1
Glyma.01G225500 Glycine max HOM05D007727 ORTHO05D009078 9.4e-15 84.0 114 43.9
Phvul.002G164400 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 3.9e-13 78.6 113 43.4
VMungo1215G2373 Vigna mungo HOM05D007727 ORTHO05D009078 1.7e-11 73.2 117 41.0
LjContig00312_ERROPOS870357g0016151 Lotus japonicus HOM05D007727 ORTHO05D009078 3.1e-10 68.9 130 41.5
Hma1.2p1_1746F.1_g300420 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 5.3e-10 68.2 107 41.1
Dinv38830 Davidia involucrata HOM05D007727 ORTHO05D009078 5.9e-09 64.7 120 43.3
CsaV3_4G006600 Cucumis sativus L. HOM05D007727 ORTHO05D009078 3.8e-08 62.0 88 44.3
MELO3C016295.2 Cucumis melo HOM05D007727 ORTHO05D009078 1.4e-07 60.1 82 45.1
ClCG07G011610 Citrullus lanatus HOM05D007727 ORTHO05D009078 1.9e-07 59.7 82 41.5
Hma1.2p1_1461F.1_g285070 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 7.2e-07 57.8 84 41.7
Oeu031673.1 Olea europaea HOM05D007727 ORTHO05D009078 4.7e-06 55.1 94 40.4
Manes.02G009800 Manihot esculenta HOM05D007727 ORTHO05D009078 6.1e-06 54.7 91 33.0


User provided reference genes

Program Settings