Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g098885 Medicago truncatula HOM05D006517 ORTHO05D007886 2.7e-71 271.9 142 100.0
Medtr5g081760 Medicago truncatula HOM05D006517 ORTHO05D007886 1.0e-22 110.5 58 93.1
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 4.0e-22 108.6 57 93.0
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 3.7e-20 102.1 57 86.0
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 7.0e-19 97.8 57 82.5
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 1.2e-18 97.1 57 80.7
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 5.0e-17 91.7 54 77.8
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 3.3e-16 89.0 49 85.7
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 5.5e-16 88.2 52 78.8
VMungo1215G1783 Vigna mungo HOM05D006517 ORTHO05D007886 5.5e-16 88.2 53 77.4
Medtr0259s0030 Medicago truncatula HOM05D014110 ORTHO05D012240 9.5e-16 87.4 47 95.7
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 1.2e-15 87.0 50 78.0
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 2.1e-15 86.3 144 42.4
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 6.1e-15 84.7 55 74.5
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 8.0e-15 84.3 49 77.6
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 8.0e-15 84.3 50 76.0
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 1.0e-14 84.0 50 76.0
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 1.4e-14 83.6 49 77.6
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 1.4e-14 83.6 56 66.1
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 1.8e-14 83.2 48 79.2
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 4.0e-14 82.0 54 72.2
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 4.0e-14 82.0 57 66.7
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 4.0e-14 82.0 49 75.5
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 4.0e-14 82.0 52 73.1
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 5.2e-14 81.6 49 75.5
MD02G1105800 Malus domestica HOM05D006517 ORTHO05D007886 6.8e-14 81.3 48 77.1
FvH4_1g09680 Fragaria vesca HOM05D006517 ORTHO05D007886 8.9e-14 80.9 52 71.2
FAN26G1998 Fragaria x ananassa HOM05D006517 ORTHO05D007886 8.9e-14 80.9 52 71.2
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 8.9e-14 80.9 50 72.0
Cc09_g04380 Coffea canephora HOM05D006517 ORTHO05D007886 1.2e-13 80.5 49 75.5
FAN23G1398 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.2e-13 80.5 52 71.2
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 1.2e-13 80.5 49 73.5
Nn8g38504 Nelumbo nucifera HOM05D006517 ORTHO05D007886 1.5e-13 80.1 51 72.5
EL10Ac8g18944 Beta vulgaris HOM05D006517 ORTHO05D007886 2.0e-13 79.7 48 79.2
Hund08920 Selenicereus undatus HOM05D006517 ORTHO05D007886 2.6e-13 79.3 49 73.5
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 3.4e-13 79.0 49 73.5
PSO541G2149 Papaver somniferum HOM05D006517 ORTHO05D007886 4.4e-13 78.6 51 74.5
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 7.5e-13 77.8 51 66.7
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 7.5e-13 77.8 51 66.7
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 7.5e-13 77.8 50 70.0
Cpa.g.sc82.30 Carica papaya HOM05D006517 ORTHO05D007886 1.3e-12 77.0 49 69.4
PSO675G5415 Papaver somniferum HOM05D006517 ORTHO05D007886 1.3e-12 77.0 51 72.5
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 2.2e-12 76.3 53 67.9
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 2.8e-12 75.9 51 64.7
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 2.8e-12 75.9 49 71.4
AL4G18760 Arabidopsis lyrata HOM05D006517 ORTHO05D007886 3.7e-12 75.5 49 69.4
AT2G26210 Arabidopsis thaliana HOM05D006517 ORTHO05D007886 3.7e-12 75.5 49 69.4
AUR62025324 Chenopodium quinoa HOM05D006517 ORTHO05D007886 3.7e-12 75.5 50 72.0
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 3.7e-12 75.5 50 70.0
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 4.9e-12 75.1 51 68.6
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 4.9e-12 75.1 54 63.0
Medtr4g036440 Medicago truncatula HOM05D006517 ORTHO05D007886 4.9e-12 75.1 39 89.7
Solyc06g031690.4 Solanum lycopersicum HOM05D006517 ORTHO05D007886 4.9e-12 75.1 50 68.0
MELO3C015558.2 Cucumis melo HOM05D006517 ORTHO05D007886 6.3e-12 74.7 47 70.2
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 8.3e-12 74.3 48 66.7
Nitab4.5_0005239g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 8.3e-12 74.3 50 68.0
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 1.4e-11 73.6 47 68.1
Zm00001eb327610 Zea mays HOM05D006517 ORTHO05D007886 1.4e-11 73.6 51 64.7
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 1.8e-11 73.2 46 71.7
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 1.8e-11 73.2 48 66.7
BcaNung07167 Brassica carinata HOM05D006517 ORTHO05D007886 2.4e-11 72.8 49 65.3
C04p55990 Brassica napus HOM05D006517 ORTHO05D007886 2.4e-11 72.8 49 65.3
BolC4t27132H Brassica oleracea HOM05D006517 ORTHO05D007886 2.4e-11 72.8 49 65.3
Carub.0004s0605 Capsella rubella HOM05D006517 ORTHO05D007886 2.4e-11 72.8 49 67.3
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 2.4e-11 72.8 156 39.7
Os07g0618600 Oryza sativa ssp. japonica HOM05D006517 ORTHO05D007886 2.4e-11 72.8 51 62.7
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 2.4e-11 72.8 47 68.1
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 2.4e-11 72.8 47 68.1
Sc18g0002960 Simmondsia chinensis HOM05D006517 ORTHO05D007886 2.4e-11 72.8 48 70.8
CDE05G1274 Ceratophyllum demersum HOM05D006517 ORTHO05D007886 3.1e-11 72.4 50 64.0
CARHR115040 Cardamine hirsuta HOM05D006517 ORTHO05D007886 4.1e-11 72.0 46 69.6
CAN.G55.2 Capsicum annuum HOM05D006517 ORTHO05D007886 5.4e-11 71.6 50 66.0
FAN19G3155 Fragaria x ananassa HOM05D006517 ORTHO05D007886 5.4e-11 71.6 84 51.2
FAN26G3113 Fragaria x ananassa HOM05D006517 ORTHO05D007886 5.4e-11 71.6 84 51.2
FAN28G2617 Fragaria x ananassa HOM05D006517 ORTHO05D007886 5.4e-11 71.6 84 51.2
SalBow6G1494 Salvia bowleyana HOM05D006517 ORTHO05D007886 5.4e-11 71.6 48 68.8
A04p20280 Brassica napus HOM05D006517 ORTHO05D007886 7.0e-11 71.2 49 63.3
BraA04t17607Z Brassica rapa HOM05D006517 ORTHO05D007886 7.0e-11 71.2 49 63.3
FAN23G2301 Fragaria x ananassa HOM05D006517 ORTHO05D007886 7.0e-11 71.2 84 51.2
ECA232G0292 Erigeron canadensis HOM05D001622 ORTHO05D002989 9.2e-11 70.9 48 62.5
Sp4g06310 Schrenkiella parvula HOM05D006517 ORTHO05D007886 9.2e-11 70.9 46 69.6
unitig_26.g9120 Utricularia gibba HOM05D006517 ORTHO05D007886 9.2e-11 70.9 48 66.7
MBI13_g05966_MAGBIO Magnolia biondii HOM05D006517 ORTHO05D007886 1.2e-10 70.5 49 65.3
ATR0006G021 Amborella trichopoda HOM05D006517 ORTHO05D007886 1.6e-10 70.1 51 60.8
Aqoxy7G00916 Aquilegia oxysepala HOM05D006517 ORTHO05D007886 1.6e-10 70.1 47 70.2
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 1.6e-10 70.1 48 64.6
HanXRQChr09g0258421 Helianthus annuus HOM05D006517 ORTHO05D007886 2.0e-10 69.7 48 64.6
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 2.7e-10 69.3 49 63.3
Rhsim05G0081000 Rhododendron simsii HOM05D006517 ORTHO05D007886 2.7e-10 69.3 52 59.6
Aa31LG5G9580 Aethionema arabicum HOM05D006517 ORTHO05D007886 3.5e-10 68.9 46 67.4
SGA_v2.0_scaffold31G12706 Striga asiatica HOM05D006517 ORTHO05D007886 3.5e-10 68.9 48 62.5
SGA_v2.0_scaffold318G48507 Striga asiatica HOM05D006517 ORTHO05D007886 4.5e-10 68.6 52 57.7
Thhalv10002200m.g Eutrema salsugineum HOM05D006517 ORTHO05D007886 7.8e-10 67.8 49 61.2
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 2.3e-09 66.2 46 63.0
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 6.6e-09 64.7 128 40.6
Lsat_1_v5_gn_8_118080 Lactuca sativa HOM05D006517 ORTHO05D007886 1.9e-08 63.2 117 41.0
Mapoly0086s0040 Marchantia polymorpha HOM05D006517 ORTHO05D007886 7.3e-08 61.2 49 55.1
Pp3c18_11010 Physcomitrium patens HOM05D006517 ORTHO05D007886 7.3e-08 61.2 47 55.3
Actinidia39602 Actinidia chinensis HOM05D006517 ORTHO05D007886 1.6e-07 60.1 110 40.0
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 6.1e-07 58.2 136 35.3
SMO117G0175 Selaginella moellendorffii HOM05D006517 ORTHO05D007886 2.3e-06 56.2 49 55.1


User provided reference genes

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