Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g098640 Medicago truncatula HOM05D000007 ORTHO05D000017 4.7e-42 174.1 87 100.0
Medtr0128s0110 Medicago truncatula HOM05D000007 ORTHO05D000017 1.4e-30 136.0 86 76.7
Medtr4g037465 Medicago truncatula HOM05D000007 ORTHO05D000017 7.8e-29 130.2 86 75.6
TPR.G9299 Trifolium pratense HOM05D000007 ORTHO05D000017 1.9e-19 99.0 86 62.8
Medtr0267s0050 Medicago truncatula HOM05D000007 ORTHO05D000017 5.6e-19 97.4 86 60.5
TPR.G24554 Trifolium pratense HOM05D000007 ORTHO05D000017 5.6e-19 97.4 86 61.6
Medtr3g013950 Medicago truncatula HOM05D000007 ORTHO05D000017 1.6e-18 95.9 86 60.5
Medtr7g056820 Medicago truncatula HOM05D000007 ORTHO05D000017 4.7e-18 94.4 83 59.0
TPR.G9294 Trifolium pratense HOM05D000007 ORTHO05D000017 1.8e-17 92.4 84 54.8
Psat3g146120 Pisum sativum HOM05D000007 ORTHO05D000017 1.1e-14 83.2 86 53.5
Glyma.05G071700 Glycine max HOM05D000007 ORTHO05D000017 1.5e-11 72.8 81 49.4
Glyma.08G350400 Glycine max HOM05D000007 ORTHO05D000017 7.3e-11 70.5 82 46.3
Glyma.08G353000 Glycine max HOM05D000007 ORTHO05D000017 1.3e-10 69.7 81 49.4
Glyma.05G071600 Glycine max HOM05D000007 ORTHO05D000017 1.6e-10 69.3 83 43.4
Glyma.08G352900 Glycine max HOM05D000007 ORTHO05D000017 1.6e-10 69.3 76 46.1
Glyma.05G071400 Glycine max HOM05D000007 ORTHO05D000017 4.8e-10 67.8 81 48.1
Lalb_Chr11g0073821 Lupinus albus HOM05D000007 ORTHO05D000017 6.2e-10 67.4 76 40.8
Medtr7g061060 Medicago truncatula HOM05D000007 ORTHO05D000017 6.2e-10 67.4 85 43.5
TPR.G23915 Trifolium pratense HOM05D000007 ORTHO05D000017 6.2e-10 67.4 94 43.6
Lalb_Chr05g0230151 Lupinus albus HOM05D000007 ORTHO05D000017 1.1e-09 66.6 83 45.8
Glyma.08G260800 Glycine max HOM05D000007 ORTHO05D000017 2.4e-09 65.5 79 45.6
Medtr3g080370 Medicago truncatula HOM05D000007 ORTHO05D000017 3.1e-09 65.1 94 40.4
Medtr5g056020 Medicago truncatula HOM05D000007 ORTHO05D000017 5.3e-09 64.3 84 45.2
Medtr7g062060 Medicago truncatula HOM05D000007 ORTHO05D000017 6.9e-09 63.9 85 44.7
Glyma.17G116300 Glycine max HOM05D000007 ORTHO05D000017 9.0e-09 63.5 58 50.0
Glyma.19G048000 Glycine max HOM05D000007 ORTHO05D000017 9.0e-09 63.5 85 44.7
Glyma.19G048600 Glycine max HOM05D000007 ORTHO05D000017 9.0e-09 63.5 85 44.7
Medtr1g058870 Medicago truncatula HOM05D000007 ORTHO05D000017 9.0e-09 63.5 81 45.7
Medtr5g058620 Medicago truncatula HOM05D000007 ORTHO05D000017 9.0e-09 63.5 81 45.7
Psat3g149120 Pisum sativum HOM05D000007 ORTHO05D000017 9.0e-09 63.5 86 43.0
Ca_25968_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 2.0e-08 62.4 86 43.0
Medtr6g042600 Medicago truncatula HOM05D000007 ORTHO05D000017 2.0e-08 62.4 87 42.5
Medtr7g061090 Medicago truncatula HOM05D000007 ORTHO05D000017 2.0e-08 62.4 85 41.2
Psat1g046680 Pisum sativum HOM05D000007 ORTHO05D000017 2.0e-08 62.4 88 39.8
Medtr7g056173 Medicago truncatula HOM05D000007 ORTHO05D000017 2.6e-08 62.0 89 39.3
Medtr7g056503 Medicago truncatula HOM05D000007 ORTHO05D000017 2.6e-08 62.0 83 36.1
Glyma.19G048100 Glycine max HOM05D000007 ORTHO05D000017 3.4e-08 61.6 85 44.7
Glyma.19G048200 Glycine max HOM05D000007 ORTHO05D000017 3.4e-08 61.6 85 44.7
Glyma.19G048300 Glycine max HOM05D000007 ORTHO05D000017 3.4e-08 61.6 85 44.7
Medtr7g009265 Medicago truncatula HOM05D000007 ORTHO05D000017 4.4e-08 61.2 91 38.5
Medtr6g092560 Medicago truncatula HOM05D000007 ORTHO05D000017 5.8e-08 60.8 88 38.6
Ca_25967_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 7.6e-08 60.5 84 42.9
Medtr4g024890 Medicago truncatula HOM05D000007 ORTHO05D000017 7.6e-08 60.5 77 44.2
Medtr5g068040 Medicago truncatula HOM05D000007 ORTHO05D000017 7.6e-08 60.5 90 37.8
Psat1g020840 Pisum sativum HOM05D000007 ORTHO05D000017 7.6e-08 60.5 88 40.9
Psat3g160640 Pisum sativum HOM05D000007 ORTHO05D000017 9.9e-08 60.1 83 42.2
Glyma.19G048700 Glycine max HOM05D000007 ORTHO05D000017 1.3e-07 59.7 85 43.5
Glyma.19G049000 Glycine max HOM05D000007 ORTHO05D000017 1.3e-07 59.7 85 43.5
Ca_07595_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 1.7e-07 59.3 85 32.9
Medtr2g043410 Medicago truncatula HOM05D000007 ORTHO05D000017 1.7e-07 59.3 94 36.2
Medtr7g056717 Medicago truncatula HOM05D000007 ORTHO05D000017 2.2e-07 58.9 78 43.6
Medtr5g043160 Medicago truncatula HOM05D000007 ORTHO05D000017 2.9e-07 58.5 85 37.6
Glyma.19G048800 Glycine max HOM05D000007 ORTHO05D000017 3.8e-07 58.2 85 43.5
Medtr1g029650 Medicago truncatula HOM05D000007 ORTHO05D000017 3.8e-07 58.2 85 37.6
Medtr6g016285 Medicago truncatula HOM05D000007 ORTHO05D000017 3.8e-07 58.2 94 42.6
Medtr7g061050 Medicago truncatula HOM05D000007 ORTHO05D000017 3.8e-07 58.2 83 39.8
Medtr8g066440 Medicago truncatula HOM05D000007 ORTHO05D000017 3.8e-07 58.2 76 43.4
Medtr7g056290 Medicago truncatula HOM05D000007 ORTHO05D000017 4.9e-07 57.8 94 38.3
Medtr6g088385 Medicago truncatula HOM05D000007 ORTHO05D000017 6.4e-07 57.4 81 40.7
Psat1g045640 Pisum sativum HOM05D000007 ORTHO05D000017 6.4e-07 57.4 95 38.9
Glyma.08G134900 Glycine max HOM05D000007 ORTHO05D000017 8.4e-07 57.0 81 37.0
Medtr1g112010 Medicago truncatula HOM05D000007 ORTHO05D000017 8.4e-07 57.0 81 39.5
Medtr2g437110 Medicago truncatula HOM05D000007 ORTHO05D000017 8.4e-07 57.0 82 37.8
Medtr4g019990 Medicago truncatula HOM05D000007 ORTHO05D000017 8.4e-07 57.0 81 38.3
Medtr7g056390 Medicago truncatula HOM05D000007 ORTHO05D000017 8.4e-07 57.0 94 38.3
arahy.Tifrunner.gnm1.ann1.DVHS31 Arachis hypogaea HOM05D000007 ORTHO05D000017 1.1e-06 56.6 87 42.5
arahy.Tifrunner.gnm1.ann1.YU78V4 Arachis hypogaea HOM05D000007 ORTHO05D000017 1.1e-06 56.6 87 42.5
Medtr7g055977 Medicago truncatula HOM05D000007 ORTHO05D000017 1.1e-06 56.6 80 40.0
Medtr0707s0020 Medicago truncatula HOM05D000007 ORTHO05D000017 1.4e-06 56.2 82 39.0
Medtr6g055210 Medicago truncatula HOM05D000007 ORTHO05D000017 1.4e-06 56.2 93 36.6
Medtr8g030630 Medicago truncatula HOM05D000007 ORTHO05D000017 1.4e-06 56.2 85 38.8
Medtr0464s0020 Medicago truncatula HOM05D000007 ORTHO05D000017 1.9e-06 55.8 94 36.2
Medtr2g043400 Medicago truncatula HOM05D000007 ORTHO05D000017 1.9e-06 55.8 87 36.8
Medtr4g030760 Medicago truncatula HOM05D000007 ORTHO05D000017 1.9e-06 55.8 89 37.1
Medtr7g056710 Medicago truncatula HOM05D000007 ORTHO05D000017 1.9e-06 55.8 59 45.8
Psat0s1287g0040 Pisum sativum HOM05D000007 ORTHO05D000017 1.9e-06 55.8 85 37.6
Ca_06541_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 2.4e-06 55.5 89 38.2
Medtr7g035295 Medicago truncatula HOM05D000007 ORTHO05D000017 2.4e-06 55.5 91 31.9
TPR.G9094 Trifolium pratense HOM05D000169 ORTHO05D000542 2.4e-06 55.5 82 36.6
Medtr4g030980 Medicago truncatula HOM05D000007 ORTHO05D000017 3.2e-06 55.1 84 35.7
Medtr7g056737 Medicago truncatula HOM05D000007 ORTHO05D000017 3.2e-06 55.1 83 39.8
Medtr3g464470 Medicago truncatula HOM05D000007 ORTHO05D000017 4.2e-06 54.7 62 40.3
Psat5g163400 Pisum sativum HOM05D000007 ORTHO05D000017 4.2e-06 54.7 85 36.5
Medtr7g056003 Medicago truncatula HOM05D000007 ORTHO05D000017 5.4e-06 54.3 95 36.8
Medtr7g066000 Medicago truncatula HOM05D000007 ORTHO05D000017 5.4e-06 54.3 82 34.1
Psat3g106280 Pisum sativum HOM05D000007 ORTHO05D000017 5.4e-06 54.3 74 37.8
TPR.G13639 Trifolium pratense HOM05D000007 ORTHO05D000017 5.4e-06 54.3 83 33.7
Glyma.02G041600 Glycine max HOM05D000007 ORTHO05D000017 7.1e-06 53.9 54 50.0
Glyma.08G229700 Glycine max HOM05D000007 ORTHO05D000017 7.1e-06 53.9 57 49.1
Medtr3g437520 Medicago truncatula HOM05D000007 ORTHO05D000017 7.1e-06 53.9 89 36.0
Medtr7g052670 Medicago truncatula HOM05D000007 ORTHO05D000017 7.1e-06 53.9 82 34.1
TPR.G5556 Trifolium pratense HOM05D000007 ORTHO05D000017 7.1e-06 53.9 86 38.4
Ca_06544_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 9.3e-06 53.5 84 38.1
Medtr2g010950 Medicago truncatula HOM05D000007 ORTHO05D000017 9.3e-06 53.5 63 39.7
Medtr4g013185 Medicago truncatula HOM05D000007 ORTHO05D000017 9.3e-06 53.5 83 41.0
Medtr4g031020 Medicago truncatula HOM05D000007 ORTHO05D000017 9.3e-06 53.5 84 35.7
Medtr7g057270 Medicago truncatula HOM05D000007 ORTHO05D000017 9.3e-06 53.5 63 44.4
Medtr7g066080 Medicago truncatula HOM05D000007 ORTHO05D000017 9.3e-06 53.5 59 44.1
Psat3g106240 Pisum sativum HOM05D000007 ORTHO05D000017 9.3e-06 53.5 74 35.1


User provided reference genes

Program Settings