Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g096640 Medicago truncatula HOM05D007269 ORTHO05D008531 6.2e-96 354.4 211 100.0
TPR.G28777 Trifolium pratense HOM05D007269 ORTHO05D008531 3.9e-66 255.4 214 72.4
Psat7g036960 Pisum sativum HOM05D007269 ORTHO05D008531 1.9e-60 236.5 214 65.0
Lj4g0016206 Lotus japonicus HOM05D007269 ORTHO05D008531 1.4e-44 183.7 218 54.6
Lalb_Chr07g0183561 Lupinus albus HOM05D007269 ORTHO05D008531 3.9e-42 175.6 213 51.6
Phvul.002G285300 Phaseolus vulgaris HOM05D007269 ORTHO05D008531 4.3e-41 172.2 210 52.9
Lalb_Chr13g0297191 Lupinus albus HOM05D007269 ORTHO05D008531 1.5e-38 163.7 216 51.4
VMungo0251G2992 Vigna mungo HOM05D031312 ORTHO05D008531 2.0e-22 110.2 171 46.8
Glyma.05G203500 Glycine max HOM05D031312 ORTHO05D008531 3.5e-14 82.8 160 51.2
Aqoxy5G03286 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 7.7e-14 81.6 211 33.6
Ciclev10032833m.g Citrus clementina HOM05D007269 ORTHO05D008531 1.3e-13 80.9 207 34.8
QL10p002347 Quercus lobata HOM05D007269 ORTHO05D008531 6.5e-13 78.6 204 36.3
arahy.Tifrunner.gnm1.ann1.0J46GK Arachis hypogaea HOM05D031312 ORTHO05D008531 2.5e-12 76.6 166 42.8
arahy.Tifrunner.gnm1.ann1.MRR6R9 Arachis hypogaea HOM05D031312 ORTHO05D008531 5.5e-12 75.5 157 43.3
Potri.015G099800 Populus trichocarpa HOM05D007269 ORTHO05D008531 2.7e-11 73.2 218 33.5
CiPaw.11G004900 Carya illinoinensis HOM05D007269 ORTHO05D008531 1.0e-10 71.2 210 31.9
Potri.012G101800 Populus trichocarpa HOM05D007269 ORTHO05D008531 2.3e-10 70.1 206 29.6
Sabra12G0074700 Salix brachista HOM05D001095 ORTHO05D000976 2.3e-10 70.1 220 30.9
Aqoxy3G01626 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 8.8e-10 68.2 224 29.9
Atru.chr6.1845 Acer truncatum HOM05D007269 ORTHO05D008531 1.2e-09 67.8 202 35.1
Sabra15G0120500 Salix brachista HOM05D007269 ORTHO05D008531 1.2e-09 67.8 206 32.5
CSS0016059 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 2.6e-09 66.6 208 33.7
COL.COLO4_36213 Corchorus olitorius HOM05D007269 ORTHO05D008531 3.7e-08 62.8 210 30.5
Nn4g22252 Nelumbo nucifera HOM05D007269 ORTHO05D008531 1.1e-07 61.2 208 33.2
MD06G1137900 Malus domestica HOM05D007269 ORTHO05D008531 1.4e-07 60.8 215 32.6
FAN08G0669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.4e-07 60.1 229 31.4
Thecc.03G133000 Theobroma cacao HOM05D007269 ORTHO05D008531 3.1e-07 59.7 215 27.9
Duzib084G1105 Durio zibethinus HOM05D007269 ORTHO05D008531 4.1e-07 59.3 217 29.5
ATR0582G094 Amborella trichopoda HOM05D007269 ORTHO05D008531 1.6e-06 57.4 214 30.8
Manes.14G048800 Manihot esculenta HOM05D007269 ORTHO05D008531 1.6e-06 57.4 207 29.0
TAR374G0918 Trochodendron aralioides HOM05D007269 ORTHO05D008531 2.7e-06 56.6 137 36.5
PGR119G1209 Punica granatum HOM05D007269 ORTHO05D008531 3.5e-06 56.2 211 28.4
Duzib068G0517 Durio zibethinus HOM05D007269 ORTHO05D008531 5.9e-06 55.5 218 28.0
FAN13G1779 Fragaria x ananassa HOM05D007269 ORTHO05D008531 5.9e-06 55.5 229 30.6
Manes.13G008500 Manihot esculenta HOM05D007269 ORTHO05D008531 7.7e-06 55.1 235 28.1
Nitab4.5_0000021g1020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 7.7e-06 55.1 230 31.3
Potri.001G059800 Populus trichocarpa HOM05D007269 ORTHO05D008531 7.7e-06 55.1 208 30.8
RcHm_v2.0_Chr7g0189701 Rosa chinensis HOM05D007269 ORTHO05D008531 7.7e-06 55.1 220 32.3


User provided reference genes

Program Settings