Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 1.2e-234 816.2 458 100.0
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 3.8e-183 645.2 450 75.6
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 2.0e-152 543.1 481 62.0
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 5.0e-143 511.9 458 61.8
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 1.6e-141 506.9 487 58.9
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 3.6e-141 505.8 460 61.5
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 4.7e-141 505.4 460 62.0
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 8.0e-133 478.0 460 58.0
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 2.3e-127 459.9 458 57.6
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 2.9e-122 443.0 425 58.8
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 1.0e-119 434.5 440 56.6
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 1.7e-119 433.7 376 63.0
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 7.8e-104 381.7 389 56.3
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 3.8e-90 336.3 461 44.3
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 1.5e-86 324.3 466 42.3
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 7.4e-86 322.0 461 42.7
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 1.3e-82 311.2 466 42.7
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 8.7e-79 298.5 466 42.1
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 2.4e-76 290.4 450 41.1
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 2.9e-74 283.5 461 39.3
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 1.9e-73 280.8 462 39.8
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 3.2e-73 280.0 444 40.1
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 3.2e-73 280.0 463 40.4
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 2.3e-71 273.9 469 39.7
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 6.7e-71 272.3 468 38.2
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 9.7e-70 268.5 528 35.6
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 6.3e-69 265.8 476 38.4
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 8.2e-69 265.4 461 37.3
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 2.4e-68 263.8 444 39.2
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 2.0e-67 260.8 460 37.8
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 2.9e-66 256.9 452 38.1
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 6.5e-66 255.8 453 38.0
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 1.1e-65 255.0 463 38.0
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 4.6e-64 249.6 471 36.5
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 2.3e-63 247.3 468 36.3
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 6.7e-63 245.7 498 35.3
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 6.7e-63 245.7 459 36.2
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 3.3e-62 243.4 436 37.4
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 2.8e-61 240.4 463 36.5
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.8e-61 240.4 463 36.5
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 2.8e-61 240.4 463 34.3
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 4.1e-60 236.5 463 36.3
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.2e-59 235.0 463 36.1
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 2.0e-59 234.2 387 39.0
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 1.7e-58 231.1 463 35.9
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 7.2e-57 225.7 463 36.1
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 3.0e-55 220.3 454 35.0
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 4.1e-52 209.9 462 32.9
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 1.4e-49 201.4 466 33.7
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 3.2e-49 200.3 451 34.6
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 9.4e-49 198.7 478 32.4
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 4.7e-48 196.4 384 35.7
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 6.1e-48 196.1 466 32.2
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 3.9e-47 193.4 473 32.6
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 5.2e-47 193.0 461 32.5
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 8.8e-47 192.2 415 35.2
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 1.2e-43 181.8 418 34.2
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 1.6e-43 181.4 378 34.7
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 1.0e-42 178.7 489 29.7
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 2.5e-41 174.1 473 30.7
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 1.6e-40 171.4 410 33.4
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 1.6e-40 171.4 166 57.2
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 3.0e-39 167.2 462 29.0
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 4.0e-39 166.8 162 54.3
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 8.8e-39 165.6 473 29.6
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 1.5e-38 164.9 464 29.5
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 2.6e-38 164.1 339 34.2
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 1.3e-37 161.8 477 29.1
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 6.3e-37 159.5 164 50.6
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 2.7e-35 154.1 435 30.8
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 5.9e-35 152.9 370 31.6
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 6.5e-34 149.4 154 51.9
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 6.8e-31 139.4 384 30.5
Atru.chr4.2750 Acer truncatum HOM05D007369 ORTHO05D009369 3.4e-30 137.1 181 45.9
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 5.4e-28 129.8 124 53.2
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 7.7e-27 125.9 373 26.5
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 2.9e-26 124.0 455 25.1
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 3.8e-26 123.6 364 28.6
MD16G1175500 Malus domestica HOM05D007369 ORTHO05D009369 6.6e-26 122.9 257 34.6
Lalb_Chr20g0118161 Lupinus albus HOM05D007369 ORTHO05D009369 1.9e-25 121.3 251 35.9
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 9.5e-25 119.0 93 60.2
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 1.6e-24 118.2 385 28.1
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 2.1e-24 117.9 98 62.2
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 1.4e-23 115.2 419 27.7
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 3.0e-23 114.0 158 44.3
TAR365G0645 Trochodendron aralioides HOM05D007369 ORTHO05D009369 4.5e-19 100.1 246 31.3
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 5.0e-18 96.7 146 38.4
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 7.3e-17 92.8 460 27.4
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 1.5e-14 85.1 70 54.3
Lsat_1_v5_gn_5_50560 Lactuca sativa HOM05D007369 ORTHO05D009369 5.4e-12 76.6 137 37.2
SEGI_26846 Sequoiadendron giganteum HOM05D007369 ORTHO05D009369 1.2e-11 75.5 207 30.4
Lalb_Chr20g0118171 Lupinus albus HOM05D007369 ORTHO05D009369 2.3e-10 71.2 56 66.1
VMungo0647G1723 Vigna mungo HOM05D007369 ORTHO05D009369 6.6e-10 69.7 80 52.5
Mapoly0008s0171 Marchantia polymorpha HOM05D007369 ORTHO05D009369 2.1e-08 64.7 152 30.3
MD16G1175600 Malus domestica HOM05D007369 ORTHO05D009369 3.6e-08 63.9 76 48.7


User provided reference genes

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