Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 0.0e+00 1146.7 602 100.0
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 2.0e-285 985.3 600 86.0
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 8.9e-273 943.3 605 83.1
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 1.3e-260 902.9 600 82.2
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 1.9e-251 872.5 546 81.5
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 4.0e-249 864.8 587 76.5
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 8.3e-247 857.1 593 75.0
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 2.4e-246 855.5 580 77.2
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 1.4e-241 839.7 547 79.0
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 1.3e-199 700.3 547 66.9
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 4.3e-195 685.3 555 65.6
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 1.2e-189 667.2 551 64.6
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 6.3e-186 654.8 626 58.1
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 3.1e-185 652.5 548 65.1
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 9.1e-185 651.0 557 64.5
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 7.7e-184 647.9 548 63.7
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 7.7e-184 647.9 542 63.7
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 3.8e-183 645.6 540 65.2
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 1.5e-182 643.7 557 63.7
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 1.5e-182 643.7 557 63.7
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 5.5e-182 641.7 547 63.1
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 7.2e-182 641.3 542 64.6
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 6.1e-181 638.3 564 61.9
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 8.8e-180 634.4 548 61.9
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 4.4e-179 632.1 540 63.9
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 6.3e-178 628.2 548 61.5
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 1.4e-177 627.1 538 63.6
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 7.0e-177 624.8 552 62.0
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 5.9e-176 621.7 538 61.7
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 1.1e-174 617.5 529 61.4
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 2.1e-173 613.2 551 61.0
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 4.7e-173 612.1 546 60.1
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 6.1e-173 611.7 545 59.8
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 8.0e-173 611.3 545 59.6
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 1.0e-172 610.9 545 59.8
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 1.4e-172 610.5 549 59.9
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 1.4e-172 610.5 579 59.1
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 1.8e-172 610.1 544 60.1
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 6.8e-172 608.2 548 59.1
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 1.2e-171 607.4 552 59.1
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 2.0e-171 606.7 540 61.1
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 3.4e-171 605.9 551 59.0
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 5.7e-171 605.1 577 58.2
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 5.7e-171 605.1 548 59.1
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 5.7e-171 605.1 540 61.7
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 1.7e-170 603.6 532 59.4
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 1.7e-170 603.6 538 61.9
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 1.8e-169 600.1 552 59.1
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 2.4e-169 599.7 552 59.1
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 9.1e-169 597.8 544 58.8
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 1.6e-168 597.0 621 55.1
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 3.5e-168 595.9 547 60.0
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 4.5e-168 595.5 546 59.3
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 4.5e-168 595.5 540 60.7
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 1.0e-167 594.3 541 61.0
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 1.7e-167 593.6 555 59.5
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 1.7e-167 593.6 542 59.8
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 6.5e-167 591.7 549 59.9
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 6.5e-167 591.7 549 60.1
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 8.5e-167 591.3 596 54.7
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 1.1e-166 590.9 550 58.2
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 1.5e-166 590.5 538 60.8
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 2.5e-166 589.7 540 60.6
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 2.5e-166 589.7 552 59.6
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 3.2e-166 589.3 547 60.9
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 3.6e-165 585.9 539 58.8
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 1.4e-164 583.9 559 59.0
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 1.4e-164 583.9 547 58.7
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 3.4e-163 579.3 549 58.1
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 5.4e-161 572.0 563 57.5
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 2.9e-159 566.2 548 57.5
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 1.9e-158 563.5 544 58.5
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 7.3e-158 561.6 543 58.9
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 2.6e-155 553.1 617 53.0
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 1.3e-154 550.8 537 57.2
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 1.4e-153 547.4 378 74.9
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 7.0e-153 545.0 552 57.2
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 1.0e-151 541.2 377 74.3
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 1.0e-151 541.2 549 55.9
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 7.5e-147 525.0 549 54.8
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 1.4e-140 504.2 551 52.8
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 3.1e-140 503.1 473 58.4
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 5.8e-139 498.8 480 59.2
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 1.7e-135 487.3 472 60.8
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 1.3e-130 471.1 537 51.8
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 1.1e-126 458.0 470 54.0
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 7.1e-113 412.1 544 44.1
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 1.0e-111 408.3 568 45.1
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 6.9e-108 395.6 388 59.5
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 1.9e-105 387.5 374 58.6
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 1.1e-102 378.3 320 60.6
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 2.1e-101 374.0 346 60.7
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.2e-99 368.2 386 57.3
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 4.6e-96 356.3 381 54.6
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 4.8e-85 319.7 446 43.7
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 2.5e-81 307.4 569 37.4
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 7.4e-78 295.8 388 47.9
Glyma.08G131850 Glycine max HOM05D006816 ORTHO05D008666 7.4e-70 269.2 178 77.0
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 2.5e-57 227.6 227 56.8
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 3.1e-52 210.7 146 76.0
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 7.2e-49 199.5 136 77.9
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 1.5e-46 191.8 515 32.6
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 1.0e-39 169.1 117 76.1
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 1.3e-37 162.2 98 86.7
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 7.3e-33 146.4 332 33.4
CDE09G0157 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 3.9e-26 124.0 164 42.7
HPP92_023363 Vanilla planifolia HOM05D006816 ORTHO05D008666 1.5e-25 122.1 131 50.4
Glyma.08G131775 Glycine max HOM05D006816 ORTHO05D008666 1.8e-23 115.2 85 70.6
COL.COLO4_35805 Corchorus olitorius HOM05D006816 ORTHO05D008666 4.4e-22 110.5 101 58.4
Actinidia08129 Actinidia chinensis HOM05D006816 ORTHO05D008666 1.5e-17 95.5 80 61.2
Actinidia01355 Actinidia chinensis HOM05D006816 ORTHO05D008666 1.9e-17 95.1 54 77.8
CBR_g52391 Chara braunii HOM05D006816 ORTHO05D008666 4.0e-15 87.4 195 32.3
FvH4_4g35670 Fragaria vesca HOM05D006816 ORTHO05D008666 3.2e-12 77.8 58 65.5
FAN22G1065 Fragaria x ananassa HOM05D000247 ORTHO05D000288 2.1e-11 75.1 62 59.7


User provided reference genes

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