Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g088310 Medicago truncatula HOM05D000379 ORTHO05D259755 5.2e-69 264.2 132 100.0
Medtr1g070385 Medicago truncatula HOM05D000856 ORTHO05D002253 1.3e-11 73.6 46 78.3
Ca_09703_v3 Cicer arietinum L. HOM05D000856 ORTHO05D002253 8.5e-11 70.9 46 73.9
arahy.Tifrunner.gnm1.ann1.IG2SMP Arachis hypogaea HOM05D000379 ORTHO05D000254 3.2e-10 68.9 46 69.6
Psat6g056440 Pisum sativum HOM05D000856 ORTHO05D002253 1.2e-09 67.0 46 71.7
Lalb_Chr21g0306231 Lupinus albus HOM05D000379 ORTHO05D000254 2.7e-09 65.9 46 67.4
arahy.Tifrunner.gnm1.ann1.4EA0CW Arachis hypogaea HOM05D000379 ORTHO05D000254 3.6e-09 65.5 46 67.4
arahy.Tifrunner.gnm1.ann1.KTZ8QC Arachis hypogaea HOM05D000856 ORTHO05D002253 3.6e-09 65.5 46 67.4
Glyma.02G140500 Glycine max HOM05D000379 ORTHO05D000254 6.1e-09 64.7 46 69.6
Lj5g0021484 Lotus japonicus HOM05D000856 ORTHO05D002253 6.1e-09 64.7 46 69.6
TPR.G27283 Trifolium pratense HOM05D000379 ORTHO05D000254 2.3e-08 62.8 46 65.2
Phvul.007G178300 Phaseolus vulgaris HOM05D000379 ORTHO05D000254 4.0e-08 62.0 46 65.2
Lj3C715G10 Lonicera japonica HOM05D000379 ORTHO05D000254 1.2e-07 60.5 46 63.0
VMungo0720G3001 Vigna mungo HOM05D000379 ORTHO05D000254 3.3e-07 58.9 46 63.0
GSVIVG01017896001 Vitis vinifera HOM05D000379 ORTHO05D000254 4.4e-07 58.5 46 60.9
CiPaw.01G160900 Carya illinoinensis HOM05D000379 ORTHO05D000254 5.7e-07 58.2 45 55.6
SGA_v2.0_scaffold39G15327 Striga asiatica HOM05D000379 ORTHO05D000254 5.7e-07 58.2 43 62.8
Atru.chr4.2549 Acer truncatum HOM05D000379 ORTHO05D000254 7.5e-07 57.8 45 60.0
Oeu037688.1 Olea europaea HOM05D000379 ORTHO05D000254 9.7e-07 57.4 46 56.5
Cfa015592 Carpinus fangiana HOM05D000379 ORTHO05D000254 1.3e-06 57.0 45 55.6
Haze_00952 Corylus avellana HOM05D000379 ORTHO05D000254 1.3e-06 57.0 45 55.6
Hma1.2p1_0995F.1_g245830 Hydrangea macrophylla HOM05D000379 ORTHO05D000254 1.3e-06 57.0 46 56.5
Lj6A575G20 Lonicera japonica HOM05D000379 ORTHO05D000254 1.3e-06 57.0 45 60.0
QL06p003947 Quercus lobata HOM05D000379 ORTHO05D000254 1.3e-06 57.0 45 57.8
Migut.G00298 Erythranthe guttata HOM05D000379 ORTHO05D000254 4.8e-06 55.1 49 51.0
Duzib150G1186 Durio zibethinus HOM05D000379 ORTHO05D000254 8.2e-06 54.3 45 53.3
FAN07G1712 Fragaria x ananassa HOM05D000379 ORTHO05D000254 8.2e-06 54.3 46 54.3


User provided reference genes

Program Settings