Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g087680 Medicago truncatula HOM05D000646 ORTHO05D000607 6.6e-32 140.2 76 100.0
Medtr6g025065 Medicago truncatula HOM05D002318 ORTHO05D004713 3.5e-09 64.7 57 66.7
Medtr4g061140 Medicago truncatula HOM05D000646 ORTHO05D000607 7.3e-07 57.0 41 68.3
Aqoxy2G01884 Aquilegia oxysepala HOM05D000646 ORTHO05D000607 1.2e-06 56.2 38 65.8
CAN.G350.38 Capsicum annuum HOM05D000646 ORTHO05D000607 1.2e-06 56.2 38 65.8
Lj3g0012950 Lotus japonicus HOM05D000646 ORTHO05D000607 1.2e-06 56.2 41 65.9
Peaxi162Scf00005g00505 Petunia axillaris HOM05D000646 ORTHO05D000607 1.2e-06 56.2 38 65.8
PGR102G0301 Punica granatum HOM05D000646 ORTHO05D000607 1.2e-06 56.2 38 65.8
Sabra09G0010100 Salix brachista HOM05D000646 ORTHO05D000607 1.2e-06 56.2 41 63.4
Solyc09g007270.3 Solanum lycopersicum HOM05D000646 ORTHO05D000607 1.2e-06 56.2 38 65.8
Sopen09g002140 Solanum pennellii HOM05D000646 ORTHO05D000607 1.2e-06 56.2 38 65.8
Sopen09g002160 Solanum pennellii HOM05D000646 ORTHO05D000607 1.2e-06 56.2 38 65.8
PGSC0003DMG401001731 Solanum tuberosum HOM05D000646 ORTHO05D000607 1.2e-06 56.2 38 65.8
GSVIVG01025104001 Vitis vinifera HOM05D000646 ORTHO05D000607 1.2e-06 56.2 41 65.9
HanXRQChr02g0044461 Helianthus annuus HOM05D000646 ORTHO05D000607 1.6e-06 55.8 38 65.8
HanXRQChr05g0133141 Helianthus annuus HOM05D000646 ORTHO05D000607 1.6e-06 55.8 38 65.8
Psat7g223000 Pisum sativum HOM05D000646 ORTHO05D000607 1.6e-06 55.8 41 63.4
CsaV3_1G033510 Cucumis sativus L. HOM05D000646 ORTHO05D000607 2.1e-06 55.5 41 63.4
DCAR_005477 Daucus carota HOM05D000646 ORTHO05D000607 2.1e-06 55.5 41 63.4
Duzib150G0027 Durio zibethinus HOM05D000646 ORTHO05D000607 2.1e-06 55.5 41 63.4
FvH4_3g33910 Fragaria vesca HOM05D000646 ORTHO05D000607 2.1e-06 55.5 41 63.4
FAN11G2822 Fragaria x ananassa HOM05D000646 ORTHO05D000607 2.1e-06 55.5 41 63.4
FAN16G2927 Fragaria x ananassa HOM05D000646 ORTHO05D000607 2.1e-06 55.5 41 63.4
FAN21G1116 Fragaria x ananassa HOM05D000646 ORTHO05D000607 2.1e-06 55.5 41 63.4
FAN25G1991 Fragaria x ananassa HOM05D000646 ORTHO05D000607 2.1e-06 55.5 41 63.4
Potri.009G015400 Populus trichocarpa HOM05D000646 ORTHO05D000607 2.1e-06 55.5 41 63.4
RcHm_v2.0_Chr5g0061461 Rosa chinensis HOM05D000646 ORTHO05D000607 2.1e-06 55.5 41 63.4
DCAR_006029 Daucus carota HOM05D000646 ORTHO05D000607 2.8e-06 55.1 41 63.4
Eucgr.B02456 Eucalyptus grandis HOM05D000646 ORTHO05D000607 2.8e-06 55.1 41 61.0
Lj2A1040T27 Lonicera japonica HOM05D000646 ORTHO05D000607 2.8e-06 55.1 38 65.8
MD11G1121400 Malus domestica HOM05D000646 ORTHO05D000607 2.8e-06 55.1 38 63.2
MD12G1125600 Malus domestica HOM05D000646 ORTHO05D000607 2.8e-06 55.1 37 67.6
Potri.006G132200 Populus trichocarpa HOM05D000646 ORTHO05D000607 2.8e-06 55.1 41 61.0
PGR119G0986 Punica granatum HOM05D000646 ORTHO05D000607 2.8e-06 55.1 41 63.4
QL07p045384 Quercus lobata HOM05D000646 ORTHO05D000607 2.8e-06 55.1 41 61.0
HPP92_001034 Vanilla planifolia HOM05D000646 ORTHO05D000607 2.8e-06 55.1 41 61.0
HPP92_017939 Vanilla planifolia HOM05D000646 ORTHO05D000607 2.8e-06 55.1 38 63.2
Ca_27917_v3 Cicer arietinum L. HOM05D000646 ORTHO05D000607 3.6e-06 54.7 41 65.9
Nitab4.5_0000022g0310 Nicotiana tabacum HOM05D000646 ORTHO05D000607 3.6e-06 54.7 38 60.5
Nitab4.5_0001142g0030 Nicotiana tabacum HOM05D000646 ORTHO05D000607 3.6e-06 54.7 35 65.7
Nitab4.5_0011292g0010 Nicotiana tabacum HOM05D000646 ORTHO05D000607 3.6e-06 54.7 38 60.5
Rhsim01G0221600 Rhododendron simsii HOM05D000646 ORTHO05D000607 3.6e-06 54.7 38 63.2
Ah.01g002330 Amaranthus hybridus HOM05D000646 ORTHO05D000607 4.7e-06 54.3 41 65.9
AUR62006493 Chenopodium quinoa HOM05D000646 ORTHO05D000607 4.7e-06 54.3 41 65.9
AUR62025041 Chenopodium quinoa HOM05D000646 ORTHO05D000607 4.7e-06 54.3 41 65.9
ClCG03G002010 Citrullus lanatus HOM05D000137 ORTHO05D000607 4.7e-06 54.3 41 61.0
Gorai.004G227300 Gossypium raimondii HOM05D000646 ORTHO05D000607 4.7e-06 54.3 41 63.4
Potri.006G089000 Populus trichocarpa HOM05D000646 ORTHO05D000607 4.7e-06 54.3 38 65.8
QL01p036103 Quercus lobata HOM05D000646 ORTHO05D000607 4.7e-06 54.3 38 63.2
Thecc.09G336400 Theobroma cacao HOM05D000646 ORTHO05D000607 4.7e-06 54.3 41 61.0
MELO3C020719.2 Cucumis melo HOM05D000646 ORTHO05D000607 6.2e-06 53.9 41 58.5
Duzib168G0539 Durio zibethinus HOM05D000646 ORTHO05D000607 6.2e-06 53.9 41 61.0
SalBow3G2841 Salvia bowleyana HOM05D000646 ORTHO05D000607 6.2e-06 53.9 41 61.0
EL10Ac7g17337 Beta vulgaris HOM05D000646 ORTHO05D000607 8.1e-06 53.5 37 64.9
MD03G1108200 Malus domestica HOM05D000646 ORTHO05D000607 8.1e-06 53.5 38 60.5
Manes.04G026800 Manihot esculenta HOM05D000646 ORTHO05D000607 8.1e-06 53.5 37 64.9
Nitab4.5_0006152g0030 Nicotiana tabacum HOM05D000646 ORTHO05D000607 8.1e-06 53.5 37 64.9
Oeu029548.1 Olea europaea HOM05D000646 ORTHO05D000607 8.1e-06 53.5 37 64.9
Potri.016G084800 Populus trichocarpa HOM05D000646 ORTHO05D000607 8.1e-06 53.5 41 63.4
PGR004G2804 Punica granatum HOM05D000646 ORTHO05D000607 8.1e-06 53.5 37 64.9
TWI74G0611 Tripterygium wilfordii HOM05D000646 ORTHO05D000607 8.1e-06 53.5 37 64.9
TAR633G1188 Trochodendron aralioides HOM05D000646 ORTHO05D000607 8.1e-06 53.5 41 61.0


User provided reference genes

Program Settings