Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g085370 Medicago truncatula HOM05D001200 ORTHO05D002731 3.4e-33 144.4 73 100.0
Medtr7g108460 Medicago truncatula HOM05D001200 ORTHO05D002731 5.9e-22 107.1 82 74.4
Medtr5g094180 Medicago truncatula HOM05D001200 ORTHO05D002731 1.5e-20 102.4 95 65.3
Medtr2g042860 Medicago truncatula HOM05D001200 ORTHO05D002731 5.5e-20 100.5 69 79.7
Medtr8g056200 Medicago truncatula HOM05D001200 ORTHO05D002731 7.2e-20 100.1 69 78.3
Medtr3g114440 Medicago truncatula HOM05D001200 ORTHO05D002731 2.8e-19 98.2 69 75.4
Medtr7g112630 Medicago truncatula HOM05D001200 ORTHO05D002731 8.0e-19 96.7 96 61.5
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 1.0e-18 96.3 90 63.3
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 1.0e-18 96.3 90 63.3
Medtr2g103350 Medicago truncatula HOM05D001200 ORTHO05D002731 3.0e-18 94.7 88 64.8
Medtr5g021300 Medicago truncatula HOM05D001200 ORTHO05D002731 5.2e-18 94.0 95 61.1
Medtr4g080900 Medicago truncatula HOM05D001200 ORTHO05D002731 2.0e-17 92.0 90 61.1
Medtr7g044990 Medicago truncatula HOM05D001200 ORTHO05D002731 2.6e-17 91.7 69 72.5
Phvul.002G050301 Phaseolus vulgaris HOM05D001200 ORTHO05D002731 3.4e-17 91.3 88 61.4
Medtr8g086440 Medicago truncatula HOM05D001200 ORTHO05D002731 4.4e-17 90.9 95 56.8
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 7.5e-17 90.1 90 58.9
arahy.Tifrunner.gnm1.ann1.2QK9Z7 Arachis hypogaea HOM05D001200 ORTHO05D002731 1.3e-16 89.4 90 56.7
BolC7t43854H Brassica oleracea HOM05D001200 ORTHO05D002731 2.2e-16 88.6 89 59.6
Ciclev10013974m.g Citrus clementina HOM05D001200 ORTHO05D002731 3.7e-16 87.8 90 55.6
Ciclev10027650m.g Citrus clementina HOM05D001200 ORTHO05D002731 3.7e-16 87.8 90 55.6
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 4.9e-16 87.4 90 57.8
C06p42250 Brassica napus HOM05D001200 ORTHO05D002731 4.9e-16 87.4 90 57.8
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 4.9e-16 87.4 90 57.8
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 4.9e-16 87.4 90 57.8
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 4.9e-16 87.4 90 57.8
BolSC35t60702H Brassica oleracea HOM05D001200 ORTHO05D002731 4.9e-16 87.4 90 57.8
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 4.9e-16 87.4 90 57.8
BolSC46t60960H Brassica oleracea HOM05D001200 ORTHO05D002731 4.9e-16 87.4 90 57.8
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 4.9e-16 87.4 90 57.8
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 4.9e-16 87.4 90 57.8
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 4.9e-16 87.4 90 57.8
Medtr3g073110 Medicago truncatula HOM05D001200 ORTHO05D002731 6.3e-16 87.0 93 58.1
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 6.3e-16 87.0 90 56.7
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 1.1e-15 86.3 90 55.6
Gohir.A02G134201 Gossypium hirsutum HOM05D001200 ORTHO05D010401 1.1e-15 86.3 90 55.6
Gohir.A13G109925 Gossypium hirsutum HOM05D001200 ORTHO05D002731 1.1e-15 86.3 90 55.6
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 1.8e-15 85.5 90 54.4
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 2.4e-15 85.1 90 56.7
Ciclev10013969m.g Citrus clementina HOM05D001200 ORTHO05D002731 3.2e-15 84.7 89 55.1
Medtr5g089040 Medicago truncatula HOM05D001200 ORTHO05D002731 3.2e-15 84.7 86 59.3
BolC2t10611H Brassica oleracea HOM05D001200 ORTHO05D002731 4.1e-15 84.3 90 56.7
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 7.0e-15 83.6 90 53.3
Medtr4g128700 Medicago truncatula HOM05D001200 ORTHO05D002731 7.0e-15 83.6 50 86.0
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 1.2e-14 82.8 90 52.2
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 1.2e-14 82.8 90 52.2
Medtr3g098750 Medicago truncatula HOM05D003236 ORTHO05D003620 1.6e-14 82.4 77 64.9
Medtr4g086110 Medicago truncatula HOM05D001200 ORTHO05D002731 1.6e-14 82.4 89 56.2
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 2.7e-14 81.6 90 53.3
TPR.G24765 Trifolium pratense HOM05D001200 ORTHO05D002731 3.5e-14 81.3 51 78.4
Medtr5g464700 Medicago truncatula HOM05D001200 ORTHO05D002731 4.6e-14 80.9 50 82.0
Medtr7g086590 Medicago truncatula HOM05D001200 ORTHO05D002731 4.6e-14 80.9 82 61.0
HanXRQChr00c0196g0572481 Helianthus annuus HOM05D001200 ORTHO05D002731 5.9e-14 80.5 89 51.7
HanXRQChr00c0328g0573601 Helianthus annuus HOM05D001200 ORTHO05D002731 5.9e-14 80.5 89 51.7
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 5.9e-14 80.5 89 51.7
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 5.9e-14 80.5 89 51.7
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 5.9e-14 80.5 89 51.7
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 5.9e-14 80.5 89 51.7
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 5.9e-14 80.5 89 51.7
PGSC0003DMG400020539 Solanum tuberosum HOM05D001200 ORTHO05D002731 5.9e-14 80.5 90 51.1
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 5.9e-14 80.5 90 51.1
Lalb_Chr23g0274791 Lupinus albus HOM05D001200 ORTHO05D002731 7.8e-14 80.1 94 51.1
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 7.8e-14 80.1 90 52.2
Medtr4g106580 Medicago truncatula HOM05D001200 ORTHO05D002731 1.3e-13 79.3 64 68.8
Medtr5g032430 Medicago truncatula HOM05D001200 ORTHO05D002731 1.3e-13 79.3 84 58.3
Lalb_Chr07g0191751 Lupinus albus HOM05D001200 ORTHO05D002731 2.3e-13 78.6 90 51.1
Ciclev10027631m.g Citrus clementina HOM05D001200 ORTHO05D002731 2.9e-13 78.2 84 53.6
Medtr0148s0110 Medicago truncatula HOM05D001200 ORTHO05D002731 2.9e-13 78.2 50 82.0
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 5.0e-13 77.4 90 48.9
SEGI_13011 Sequoiadendron giganteum HOM05D001200 ORTHO05D002731 5.0e-13 77.4 89 49.4
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 1.1e-12 76.3 90 48.9
arahy.Tifrunner.gnm1.ann1.FIPJ9G Arachis hypogaea HOM05D001200 ORTHO05D002731 1.9e-12 75.5 80 56.2
Lsat_1_v5_gn_1_14200 Lactuca sativa HOM05D001200 ORTHO05D002731 3.3e-12 74.7 85 50.6
Solyc11g021213.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 3.3e-12 74.7 90 47.8
Gohir.A01G143400 Gossypium hirsutum HOM05D001200 ORTHO05D002731 4.3e-12 74.3 85 50.6
Medtr3g109440 Medicago truncatula HOM05D001200 ORTHO05D002731 4.3e-12 74.3 45 84.4
Medtr5g099080 Medicago truncatula HOM05D001200 ORTHO05D002731 5.6e-12 73.9 50 80.0
Medtr1g040655 Medicago truncatula HOM05D001200 ORTHO05D002731 7.3e-12 73.6 47 80.9
Nitab4.5_0001342g0130 Nicotiana tabacum HOM05D001200 ORTHO05D002731 7.3e-12 73.6 88 48.9
Medtr1g103000 Medicago truncatula HOM05D001200 ORTHO05D002731 2.1e-11 72.0 45 82.2
Migut.D01384 Erythranthe guttata HOM05D001200 ORTHO05D002731 3.6e-11 71.2 51 68.6
Gorai.006G071400 Gossypium raimondii HOM05D001200 ORTHO05D002731 3.6e-11 71.2 51 68.6
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 3.6e-11 71.2 90 51.1
HanXRQChr03g0073091 Helianthus annuus HOM05D001200 ORTHO05D002731 4.7e-11 70.9 50 68.0
HanXRQChr06g0183001 Helianthus annuus HOM05D001200 ORTHO05D002731 4.7e-11 70.9 50 68.0
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 4.7e-11 70.9 50 68.0
Peaxi162Scf01164g00035 Petunia axillaris HOM05D001200 ORTHO05D002731 1.4e-10 69.3 51 66.7
Hund03917 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.3e-10 68.6 78 51.3
Solyc01g065610.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 6.8e-10 67.0 90 45.6
Hund29438 Selenicereus undatus HOM05D001200 ORTHO05D002731 5.8e-09 63.9 60 56.7
SabraPtG0005600 Salix brachista HOM05D000533 ORTHO05D006151 7.5e-09 63.5 50 64.0
Hund08793 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund12716 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund12843 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund23968 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund27631 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund27678 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund27755 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund27831 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund28330 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund28438 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund28448 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund28536 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund28587 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund28596 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund28613 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund28850 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund28880 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund28937 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund28946 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund28951 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund28954 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund28961 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund28974 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund28979 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29026 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29089 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29109 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29179 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29186 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29244 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29247 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29251 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29254 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29261 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29273 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29277 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29281 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29285 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29288 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29316 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29434 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29453 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29499 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29654 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29713 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29755 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29814 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund29818 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund30036 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund30039 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund30120 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund30177 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund30365 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
Hund30388 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.8e-09 63.2 46 65.2
MD04G1189100 Malus domestica HOM05D001200 ORTHO05D002731 1.7e-08 62.4 84 47.6
Solyc01g065585.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 2.2e-08 62.0 90 42.2
Lalb_Chr18g0049441 Lupinus albus HOM05D001200 ORTHO05D002731 3.7e-08 61.2 88 46.6
HanXRQChr07g0204721 Helianthus annuus HOM05D001200 ORTHO05D002731 6.4e-08 60.5 49 57.1
arahy.Tifrunner.gnm1.ann1.D1ZPVC Arachis hypogaea HOM05D001200 ORTHO05D002731 4.1e-07 57.8 54 55.6
Medtr3g082380 Medicago truncatula HOM05D001200 ORTHO05D002731 4.1e-07 57.8 68 57.4
Medtr7g012690 Medicago truncatula HOM05D001200 ORTHO05D002731 1.2e-06 56.2 54 63.0
CAN.G95.10 Capsicum annuum HOM05D001200 ORTHO05D002731 2.7e-06 55.1 44 61.4
CSS0038532 Camellia sinensis var. sinensis HOM05D001200 ORTHO05D002731 7.8e-06 53.5 47 53.2
Medtr1g081540 Medicago truncatula HOM05D001200 ORTHO05D002731 7.8e-06 53.5 35 80.0


User provided reference genes

Program Settings