Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 1.2e-89 333.2 171 100.0
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 6.5e-88 327.4 171 97.7
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 1.2e-86 323.2 169 97.6
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 1.2e-86 323.2 169 97.6
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 2.1e-86 322.4 169 97.0
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 2.1e-86 322.4 169 97.0
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 3.6e-86 321.6 169 97.0
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 3.6e-86 321.6 171 96.5
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 4.7e-86 321.2 169 97.0
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 6.1e-86 320.9 169 95.9
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 8.0e-86 320.5 169 96.4
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 1.0e-85 320.1 169 95.9
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 1.4e-85 319.7 169 97.0
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 2.3e-85 318.9 169 95.9
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 2.3e-85 318.9 169 95.9
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 2.3e-85 318.9 169 95.9
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 3.0e-85 318.5 169 95.3
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 3.0e-85 318.5 169 95.9
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 4.0e-85 318.2 169 95.3
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 5.2e-85 317.8 169 95.3
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 5.2e-85 317.8 169 95.9
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 5.2e-85 317.8 171 96.5
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 5.2e-85 317.8 169 94.7
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 6.8e-85 317.4 169 94.7
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 8.8e-85 317.0 166 97.0
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 8.8e-85 317.0 169 95.9
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 1.2e-84 316.6 167 95.8
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 1.2e-84 316.6 167 95.8
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 1.2e-84 316.6 167 95.8
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.2e-84 316.6 169 94.7
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.2e-84 316.6 169 94.7
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 1.2e-84 316.6 169 94.7
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 2.0e-84 315.8 169 95.9
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 2.0e-84 315.8 169 94.1
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 2.0e-84 315.8 169 95.3
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 2.0e-84 315.8 169 94.7
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 2.6e-84 315.5 169 94.7
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 2.6e-84 315.5 166 96.4
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 3.4e-84 315.1 169 94.1
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 3.4e-84 315.1 166 95.8
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 5.7e-84 314.3 166 95.8
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 5.7e-84 314.3 169 94.7
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 7.5e-84 313.9 169 94.1
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 9.8e-84 313.5 169 94.7
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 9.8e-84 313.5 169 93.5
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 1.3e-83 313.2 168 92.3
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.3e-83 313.2 175 93.7
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 2.2e-83 312.4 169 93.5
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 2.2e-83 312.4 169 93.5
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 2.2e-83 312.4 169 93.5
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 2.8e-83 312.0 166 95.2
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 3.7e-83 311.6 169 92.9
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 3.7e-83 311.6 169 93.5
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 4.8e-83 311.2 166 95.2
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 4.8e-83 311.2 169 92.9
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 1.1e-82 310.1 167 94.0
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 1.4e-82 309.7 169 92.3
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 1.4e-82 309.7 182 89.6
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 5.4e-82 307.8 182 89.0
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 7.0e-82 307.4 166 92.2
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 9.1e-82 307.0 166 93.4
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 9.1e-82 307.0 170 92.9
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 1.2e-81 306.6 166 95.2
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 1.6e-81 306.2 169 91.1
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 2.0e-81 305.8 167 91.6
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 5.9e-81 304.3 169 94.1
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 1.0e-80 303.5 166 94.0
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.0e-80 303.5 189 86.8
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 6.6e-80 300.8 170 89.4
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 8.6e-80 300.4 188 83.0
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 1.1e-79 300.1 169 88.8
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 1.0e-77 293.5 156 94.2
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 6.8e-77 290.8 175 89.1
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 2.0e-76 289.3 156 92.9
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 3.4e-76 288.5 167 86.2
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 3.4e-76 288.5 167 86.2
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 4.4e-76 288.1 152 95.4
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 7.5e-76 287.3 161 91.3
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 1.3e-75 286.6 151 96.0
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 4.9e-75 284.6 147 98.6
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 4.9e-75 284.6 151 94.7
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 2.7e-73 278.9 163 86.5
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 4.5e-73 278.1 147 95.9
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 2.3e-72 275.8 147 95.9
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 6.1e-70 267.7 169 76.3
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 1.0e-69 266.9 139 95.7
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 1.8e-69 266.2 139 96.4
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 2.3e-69 265.8 136 97.8
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 2.0e-68 262.7 136 96.3
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 4.4e-68 261.5 139 93.5
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 1.4e-66 256.5 165 81.8
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 4.1e-66 255.0 164 81.7
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 4.1e-66 255.0 263 58.6
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 2.5e-63 245.7 128 97.7
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 4.7e-62 241.5 130 95.4
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 6.2e-62 241.1 169 76.9
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 6.2e-62 241.1 169 78.1
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 2.3e-61 239.2 168 75.6
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 2.9e-59 232.3 229 62.9
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 9.2e-58 227.3 125 94.4
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.3e-56 223.4 120 95.8
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.3e-56 223.4 120 95.8
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 1.7e-56 223.0 234 58.5
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 6.6e-56 221.1 129 86.8
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 5.8e-52 208.0 109 97.2
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 1.9e-50 203.0 109 93.6
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 2.4e-50 202.6 168 60.1
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 7.6e-44 181.0 115 82.6
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 1.9e-42 176.4 173 52.6
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 1.9e-39 166.4 166 57.8
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 1.1e-34 150.6 117 70.1
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 1.7e-32 143.3 75 94.7
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 3.0e-32 142.5 75 94.7
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 1.1e-31 140.6 75 92.0
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 1.6e-25 120.2 73 80.8
Cpa.g.c27575.2 Carica papaya HOM05D006777 ORTHO05D008360 1.8e-24 116.7 60 95.0
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 8.7e-24 114.4 69 87.0
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 1.1e-18 97.4 52 88.5
CSS0011736 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 2.0e-12 76.6 37 91.9
CSS0009674 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 5.5e-10 68.6 38 84.2
Lj3A409T19 Lonicera japonica HOM05D006777 ORTHO05D008360 7.4e-07 58.2 59 57.6


User provided reference genes

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