Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g078450 Medicago truncatula HOM05D007848 ORTHO05D000174 4.5e-83 311.2 158 100.0
Medtr8g088810 Medicago truncatula HOM05D007848 ORTHO05D000174 5.5e-65 251.1 234 61.5
Medtr5g055160 Medicago truncatula HOM05D007848 ORTHO05D000174 4.7e-56 221.5 155 77.4
Medtr1g094230 Medicago truncatula HOM05D007848 ORTHO05D000174 1.4e-55 219.9 231 60.2
Medtr8g463820 Medicago truncatula HOM05D007848 ORTHO05D000174 2.0e-54 216.1 214 62.6
Medtr5g007120 Medicago truncatula HOM05D007848 ORTHO05D000174 3.1e-52 208.8 167 68.9
Medtr5g056060 Medicago truncatula HOM05D007848 ORTHO05D000174 4.1e-52 208.4 164 69.5
Medtr3g067530 Medicago truncatula HOM05D007848 ORTHO05D000174 2.0e-51 206.1 123 88.6
Medtr7g104000 Medicago truncatula HOM05D007848 ORTHO05D000174 1.3e-50 203.4 171 68.4
Medtr6g039240 Medicago truncatula HOM05D007848 ORTHO05D000174 1.7e-50 203.0 212 59.0
Medtr1g036740 Medicago truncatula HOM05D007848 ORTHO05D000174 5.2e-47 191.4 99 96.0
Medtr8g096680 Medicago truncatula HOM05D007848 ORTHO05D000174 5.2e-47 191.4 99 96.0
Medtr3g078440 Medicago truncatula HOM05D007848 ORTHO05D000174 2.0e-46 189.5 99 94.9
Medtr4g471610 Medicago truncatula HOM05D007848 ORTHO05D000174 2.0e-46 189.5 99 94.9
Medtr6g013455 Medicago truncatula HOM05D007848 ORTHO05D000174 2.0e-46 189.5 186 60.8
Medtr8g036090 Medicago truncatula HOM05D007848 ORTHO05D000174 2.0e-46 189.5 99 94.9
Medtr4g022520 Medicago truncatula HOM05D007848 ORTHO05D000174 2.6e-46 189.1 125 78.4
Medtr2g099880 Medicago truncatula HOM05D007848 ORTHO05D000174 5.7e-46 188.0 99 93.9
Medtr3g095950 Medicago truncatula HOM05D007848 ORTHO05D000174 1.3e-45 186.8 99 93.9
Medtr3g116750 Medicago truncatula HOM05D007848 ORTHO05D000174 1.3e-45 186.8 99 93.9
Medtr4g016120 Medicago truncatula HOM05D007848 ORTHO05D000174 1.3e-45 186.8 99 93.9
Medtr7g093810 Medicago truncatula HOM05D007848 ORTHO05D000174 1.3e-45 186.8 99 93.9
Medtr4g028320 Medicago truncatula HOM05D007848 ORTHO05D000174 3.7e-45 185.3 99 93.9
Medtr3g084550 Medicago truncatula HOM05D007848 ORTHO05D000174 1.1e-44 183.7 99 92.9
Medtr1g072220 Medicago truncatula HOM05D007848 ORTHO05D000174 1.8e-44 183.0 99 91.9
Medtr5g085220 Medicago truncatula HOM05D007848 ORTHO05D000174 1.2e-43 180.3 98 92.9
Medtr2g032570 Medicago truncatula HOM05D007848 ORTHO05D000174 2.7e-43 179.1 101 91.1
Medtr1g085690 Medicago truncatula HOM05D007848 ORTHO05D000174 1.9e-41 172.9 182 58.2
Medtr7g089660 Medicago truncatula HOM05D007848 ORTHO05D000174 4.9e-37 158.3 133 64.7
Medtr5g068430 Medicago truncatula HOM05D007848 ORTHO05D000174 1.2e-32 143.7 81 87.7
Medtr3g007370 Medicago truncatula HOM05D007848 ORTHO05D000174 2.4e-28 129.4 66 95.5
Medtr3g031560 Medicago truncatula HOM05D007848 ORTHO05D000174 3.2e-28 129.0 66 95.5
Medtr2g091000 Medicago truncatula HOM05D007848 ORTHO05D000174 9.2e-28 127.5 66 93.9
Medtr4g071730 Medicago truncatula HOM05D007848 ORTHO05D000174 9.2e-28 127.5 154 53.2
Medtr1788s0010 Medicago truncatula HOM05D007848 ORTHO05D000174 8.6e-26 120.9 66 90.9
Medtr8g461360 Medicago truncatula HOM05D007848 ORTHO05D000174 1.5e-22 110.2 99 54.5
Medtr2g062200 Medicago truncatula HOM05D007848 ORTHO05D000174 2.6e-22 109.4 99 53.5
Medtr8g042630 Medicago truncatula HOM05D007848 ORTHO05D000174 6.4e-21 104.8 69 78.3
Medtr2g048560 Medicago truncatula HOM05D000353 ORTHO05D000174 1.6e-19 100.1 219 28.8
Medtr8g479260 Medicago truncatula HOM05D000353 ORTHO05D000174 4.6e-19 98.6 98 46.9
Medtr3g056240 Medicago truncatula HOM05D000353 ORTHO05D000174 6.0e-19 98.2 99 47.5
Medtr3g056270 Medicago truncatula HOM05D000353 ORTHO05D000174 6.0e-19 98.2 99 47.5
TPR.G23271 Trifolium pratense HOM05D007848 ORTHO05D000174 6.0e-19 98.2 119 45.4
Medtr2g008650 Medicago truncatula HOM05D000353 ORTHO05D000174 7.8e-19 97.8 98 46.9
TPR.G23298 Trifolium pratense HOM05D007848 ORTHO05D000174 7.8e-19 97.8 125 42.4
Medtr4g036240 Medicago truncatula HOM05D000353 ORTHO05D000174 1.3e-18 97.1 99 47.5
Medtr2g054710 Medicago truncatula HOM05D000353 ORTHO05D000174 1.1e-17 94.0 98 44.9
Phvul.006G016100 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 1.9e-17 93.2 230 28.3
Medtr5g037655 Medicago truncatula HOM05D007848 ORTHO05D000174 2.5e-17 92.8 82 64.6
Phvul.005G095200 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 4.3e-17 92.0 186 34.9
Lj3g0013474 Lotus japonicus HOM05D000353 ORTHO05D000174 7.3e-17 91.3 98 42.9
TPR.G1533 Trifolium pratense HOM05D007848 ORTHO05D000174 8.1e-16 87.8 101 46.5
Medtr2g015610 Medicago truncatula HOM05D007848 ORTHO05D000174 1.4e-15 87.0 50 82.0
Medtr1g087080 Medicago truncatula HOM05D007848 ORTHO05D000174 1.8e-15 86.7 50 82.0
Medtr1g108420 Medicago truncatula HOM05D007848 ORTHO05D000174 1.8e-15 86.7 50 82.0
Medtr3g056250 Medicago truncatula HOM05D007848 ORTHO05D000174 1.8e-15 86.7 50 82.0
Medtr1g100617 Medicago truncatula HOM05D007848 ORTHO05D000174 2.3e-15 86.3 50 82.0
Medtr3g102720 Medicago truncatula HOM05D007848 ORTHO05D000174 3.1e-15 85.9 50 84.0
Medtr1g011440 Medicago truncatula HOM05D007848 ORTHO05D000174 6.8e-15 84.7 50 82.0
TPR.G30594 Trifolium pratense HOM05D007848 ORTHO05D000174 1.2e-14 84.0 84 44.0
Medtr6g052340 Medicago truncatula HOM05D002465 ORTHO05D005308 1.5e-14 83.6 97 45.4
Medtr1g091180 Medicago truncatula HOM05D007848 ORTHO05D000174 5.8e-14 81.6 50 76.0
Medtr5g054640 Medicago truncatula HOM05D007848 ORTHO05D000174 7.5e-14 81.3 50 76.0
Medtr1g073290 Medicago truncatula HOM05D007848 ORTHO05D000174 1.3e-13 80.5 50 76.0
Medtr8g062030 Medicago truncatula HOM05D000353 ORTHO05D000174 2.2e-13 79.7 94 44.7
Phvul.005G096800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 2.2e-13 79.7 211 26.5
Medtr5g078250 Medicago truncatula HOM05D000353 ORTHO05D000174 2.9e-13 79.3 99 43.4
Medtr8g018670 Medicago truncatula HOM05D007848 ORTHO05D000174 3.7e-13 79.0 50 74.0
Medtr1g075850 Medicago truncatula HOM05D000353 ORTHO05D000174 1.4e-12 77.0 99 42.4
Medtr7g088780 Medicago truncatula HOM05D007848 ORTHO05D000174 1.9e-12 76.6 50 74.0
Medtr7g027115 Medicago truncatula HOM05D007848 ORTHO05D000174 4.1e-12 75.5 47 74.5
Medtr7g060710 Medicago truncatula HOM05D007848 ORTHO05D000174 4.1e-12 75.5 47 78.7
arahy.Tifrunner.gnm1.ann1.AKH4BK Arachis hypogaea HOM05D000353 ORTHO05D000174 1.2e-11 73.9 90 41.1
arahy.Tifrunner.gnm1.ann1.CPRZ31 Arachis hypogaea HOM05D000353 ORTHO05D000174 1.2e-11 73.9 90 41.1
arahy.Tifrunner.gnm1.ann1.IYP2GG Arachis hypogaea HOM05D000353 ORTHO05D000174 1.2e-11 73.9 90 41.1
arahy.Tifrunner.gnm1.ann1.J9NJUF Arachis hypogaea HOM05D000353 ORTHO05D000174 1.2e-11 73.9 90 41.1
arahy.Tifrunner.gnm1.ann1.LSFF47 Arachis hypogaea HOM05D000353 ORTHO05D000174 1.2e-11 73.9 90 41.1
arahy.Tifrunner.gnm1.ann1.Y6YSHD Arachis hypogaea HOM05D000353 ORTHO05D000174 1.2e-11 73.9 90 41.1
LjContig00141g0027033 Lotus japonicus HOM05D007499 ORTHO05D000174 1.2e-11 73.9 94 41.5
Phvul.010G059600 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 6.0e-11 71.6 99 43.4
Lj3g0016345 Lotus japonicus HOM05D000353 ORTHO05D000174 1.0e-10 70.9 98 33.7
arahy.Tifrunner.gnm1.ann1.UD52B8 Arachis hypogaea HOM05D008664 ORTHO05D000174 1.3e-10 70.5 165 28.5
Lj3g0013581 Lotus japonicus HOM05D007499 ORTHO05D000174 1.7e-10 70.1 94 35.1
arahy.Tifrunner.gnm1.ann1.M6VUS2 Arachis hypogaea HOM05D008664 ORTHO05D000174 3.0e-10 69.3 110 34.5
Lj5g0012270 Lotus japonicus HOM05D007499 ORTHO05D000174 3.0e-10 69.3 94 36.2
LjContig00081g0005726 Lotus japonicus HOM05D007499 ORTHO05D000174 3.9e-10 68.9 94 34.0
arahy.Tifrunner.gnm1.ann1.LS6UG6 Arachis hypogaea HOM05D008664 ORTHO05D000174 6.6e-10 68.2 157 30.6
EL10Ac7g16273 Beta vulgaris HOM05D000353 ORTHO05D000174 8.6e-10 67.8 92 35.9
Lj2g0015458 Lotus japonicus HOM05D000353 ORTHO05D000174 8.6e-10 67.8 134 29.9
Medtr7g032985 Medicago truncatula HOM05D007848 ORTHO05D000174 2.5e-09 66.2 68 47.1
Glyma.05G083400 Glycine max HOM05D000353 ORTHO05D000174 3.3e-09 65.9 164 31.1
QL93p0160_0016 Quercus lobata HOM05D002907 ORTHO05D000065 4.3e-09 65.5 145 30.3
arahy.Tifrunner.gnm1.ann1.VCM3ME Arachis hypogaea HOM05D008664 ORTHO05D000174 5.6e-09 65.1 151 27.8
arahy.Tifrunner.gnm1.ann1.7R55CH Arachis hypogaea HOM05D008664 ORTHO05D000174 7.3e-09 64.7 95 34.7
Medtr1g056650 Medicago truncatula HOM05D007848 ORTHO05D000174 7.3e-09 64.7 38 78.9
Medtr1g096860 Medicago truncatula HOM05D007848 ORTHO05D000174 7.3e-09 64.7 38 78.9
arahy.Tifrunner.gnm1.ann1.7L6ESV Arachis hypogaea HOM05D008664 ORTHO05D000174 9.5e-09 64.3 95 34.7
EL10Ac1g00284 Beta vulgaris HOM05D000353 ORTHO05D000174 9.5e-09 64.3 92 34.8
arahy.Tifrunner.gnm1.ann1.AJVM0N Arachis hypogaea HOM05D008664 ORTHO05D000174 1.6e-08 63.5 95 34.7
arahy.Tifrunner.gnm1.ann1.0VM956 Arachis hypogaea HOM05D008664 ORTHO05D000174 2.1e-08 63.2 95 34.7
Phvul.001G109800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 2.1e-08 63.2 199 26.6
arahy.Tifrunner.gnm1.ann1.64IA1E Arachis hypogaea HOM05D008664 ORTHO05D000174 2.8e-08 62.8 95 33.7
arahy.Tifrunner.gnm1.ann1.U14C6K Arachis hypogaea HOM05D008664 ORTHO05D000174 2.8e-08 62.8 95 33.7
Medtr4g046077 Medicago truncatula HOM05D007499 ORTHO05D000174 2.8e-08 62.8 128 34.4
TPR.G9150 Trifolium pratense HOM05D007499 ORTHO05D000174 4.7e-08 62.0 100 35.0
Ah.06g192340 Amaranthus hybridus HOM05D003062 ORTHO05D003468 6.2e-08 61.6 96 37.5
arahy.Tifrunner.gnm1.ann1.2DZP9N Arachis hypogaea HOM05D010000 ORTHO05D009491 8.1e-08 61.2 93 32.3
arahy.Tifrunner.gnm1.ann1.VX4W4R Arachis hypogaea HOM05D008664 ORTHO05D000174 8.1e-08 61.2 95 33.7
arahy.Tifrunner.gnm1.ann1.W2LWD3 Arachis hypogaea HOM05D008664 ORTHO05D000174 1.4e-07 60.5 95 33.7
TPR.G30682 Trifolium pratense HOM05D000096 ORTHO05D000045 1.4e-07 60.5 101 35.6
arahy.Tifrunner.gnm1.ann1.P65711 Arachis hypogaea HOM05D008664 ORTHO05D000174 2.3e-07 59.7 96 32.3
Phvul.007G155600 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 2.3e-07 59.7 88 33.0
TPR.G14684 Trifolium pratense HOM05D007499 ORTHO05D000174 3.1e-07 59.3 97 33.0
TPR.G7354 Trifolium pratense HOM05D000353 ORTHO05D000174 4.0e-07 58.9 54 53.7
arahy.Tifrunner.gnm1.ann1.HMM5RD Arachis hypogaea HOM05D000353 ORTHO05D000174 6.8e-07 58.2 115 30.4
TPR.G40139 Trifolium pratense HOM05D000096 ORTHO05D000045 6.8e-07 58.2 98 32.7
arahy.Tifrunner.gnm1.ann1.02KJQT Arachis hypogaea HOM05D008664 ORTHO05D000174 1.2e-06 57.4 95 32.6
Medtr2g015800 Medicago truncatula HOM05D007848 ORTHO05D000174 1.2e-06 57.4 33 81.8
arahy.Tifrunner.gnm1.ann1.A8IEE6 Arachis hypogaea HOM05D000353 ORTHO05D000174 2.6e-06 56.2 98 33.7
arahy.Tifrunner.gnm1.ann1.RS3EFR Arachis hypogaea HOM05D000353 ORTHO05D000174 2.6e-06 56.2 98 33.7
Lj5g0006790 Lotus japonicus HOM05D007848 ORTHO05D000174 2.6e-06 56.2 65 38.5
arahy.Tifrunner.gnm1.ann1.GIN4EI Arachis hypogaea HOM05D000353 ORTHO05D000174 3.4e-06 55.8 98 32.7
Medtr6g051890 Medicago truncatula HOM05D000353 ORTHO05D000174 3.4e-06 55.8 152 30.3
arahy.Tifrunner.gnm1.ann1.E8Q8VF Arachis hypogaea HOM05D008664 ORTHO05D000174 4.4e-06 55.5 158 25.3
Nitab4.5_0009770g0030 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.4e-06 55.5 92 37.0
arahy.Tifrunner.gnm1.ann1.5G8KYG Arachis hypogaea HOM05D000353 ORTHO05D000174 5.8e-06 55.1 98 33.7
arahy.Tifrunner.gnm1.ann1.HXT0UR Arachis hypogaea HOM05D000353 ORTHO05D000174 7.6e-06 54.7 98 32.7
arahy.Tifrunner.gnm1.ann1.T9WUAE Arachis hypogaea HOM05D029249 ORTHO05D009978 7.6e-06 54.7 99 29.3
Nitab4.5_0000011g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 7.6e-06 54.7 93 35.5


User provided reference genes

Program Settings