Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g078340 Medicago truncatula HOM05D000225 ORTHO05D022763 9.0e-26 119.4 57 100.0
Medtr8g078300 Medicago truncatula HOM05D000225 ORTHO05D003554 2.5e-20 101.3 53 84.9
Psat4g090800 Pisum sativum HOM05D000225 ORTHO05D003554 1.3e-19 99.0 53 83.0
TPR.G31554 Trifolium pratense HOM05D000225 ORTHO05D003554 4.8e-19 97.1 52 84.6
Ca_22247_v3 Cicer arietinum L. HOM05D000225 ORTHO05D003554 2.0e-17 91.7 52 82.7
Medtr8g078360 Medicago truncatula HOM05D000225 ORTHO05D022763 1.7e-16 88.6 53 79.2
Lj4g0023287 Lotus japonicus HOM05D000225 ORTHO05D003554 1.0e-13 79.3 52 69.2
Phvul.002G025500 Phaseolus vulgaris HOM05D000225 ORTHO05D003554 1.3e-08 62.4 52 53.8
MD02G1156500 Malus domestica HOM05D000225 ORTHO05D003554 2.2e-08 61.6 51 56.9
Prupe.7G147300 Prunus persica HOM05D000225 ORTHO05D003554 3.8e-08 60.8 51 54.9
VMungo1215G3439 Vigna mungo HOM05D000225 ORTHO05D003554 1.4e-07 58.9 51 52.9
arahy.Tifrunner.gnm1.ann1.A8RCAK Arachis hypogaea HOM05D000225 ORTHO05D003554 3.2e-07 57.8 50 52.0
Glyma.11G063100 Glycine max HOM05D000225 ORTHO05D003554 3.2e-07 57.8 52 50.0
TPR.G34476 Trifolium pratense HOM05D000225 ORTHO05D003554 3.2e-07 57.8 51 51.0
arahy.Tifrunner.gnm1.ann1.VID2UW Arachis hypogaea HOM05D000225 ORTHO05D003554 4.2e-07 57.4 50 52.0
Ciclev10027414m.g Citrus clementina HOM05D000225 ORTHO05D003554 4.2e-07 57.4 51 54.9
Psat2g162600 Pisum sativum HOM05D000225 ORTHO05D003554 4.2e-07 57.4 51 47.1
MBI16_g10978_MAGBIO Magnolia biondii HOM05D006999 ORTHO05D003554 5.5e-07 57.0 51 52.9
CANSAT01G0562 Cannabis sativa HOM05D000225 ORTHO05D003554 7.2e-07 56.6 51 51.0
Sabra07G0028100 Salix brachista HOM05D000225 ORTHO05D003554 7.2e-07 56.6 50 52.0
Ca_24823_v3 Cicer arietinum L. HOM05D000225 ORTHO05D003554 9.4e-07 56.2 50 54.0
Medtr5g019040 Medicago truncatula HOM05D000225 ORTHO05D003554 9.4e-07 56.2 50 52.0
Aqoxy5G01727 Aquilegia oxysepala HOM05D000225 ORTHO05D003554 1.2e-06 55.8 50 54.0
Lalb_Chr09g0322721 Lupinus albus HOM05D000225 ORTHO05D003554 1.2e-06 55.8 50 54.0
FvH4_1g14270 Fragaria vesca HOM05D000225 ORTHO05D003554 2.1e-06 55.1 56 48.2
Lj2g0020318 Lotus japonicus HOM05D000225 ORTHO05D003554 2.1e-06 55.1 50 54.0
Cpa.g.sc15.133 Carica papaya HOM05D000225 ORTHO05D003554 2.7e-06 54.7 51 51.0
TAR628G1589 Trochodendron aralioides HOM05D000225 ORTHO05D003554 2.7e-06 54.7 51 49.0
Gohir.A11G044800 Gossypium hirsutum HOM05D000225 ORTHO05D003554 3.6e-06 54.3 52 51.9
Gohir.D11G048300 Gossypium hirsutum HOM05D000225 ORTHO05D003554 3.6e-06 54.3 52 51.9
Gorai.007G051800 Gossypium raimondii HOM05D000225 ORTHO05D003554 3.6e-06 54.3 52 51.9
COL.COLO4_22153 Corchorus olitorius HOM05D000225 ORTHO05D003554 4.7e-06 53.9 52 51.9
FAN23G2134 Fragaria x ananassa HOM05D000225 ORTHO05D003554 4.7e-06 53.9 54 51.9
FAN28G2213 Fragaria x ananassa HOM05D000225 ORTHO05D003554 6.1e-06 53.5 54 50.0
Eucgr.H01926 Eucalyptus grandis HOM05D000225 ORTHO05D003554 7.9e-06 53.1 52 46.2


User provided reference genes

Program Settings