Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 1.2e-109 399.8 202 100.0
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 2.3e-92 342.4 207 86.5
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 1.5e-91 339.7 209 86.1
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 1.0e-76 290.4 213 73.2
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 2.0e-75 286.2 214 73.8
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 2.0e-75 286.2 213 73.7
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 9.8e-75 283.9 221 72.9
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 3.7e-74 282.0 214 73.4
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 1.1e-73 280.4 210 75.7
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 1.5e-70 270.0 210 71.4
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 1.3e-66 256.9 218 63.8
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 6.4e-66 254.6 214 65.4
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 6.4e-66 254.6 207 65.7
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.4e-65 252.7 171 74.3
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 4.1e-65 251.9 221 61.5
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 5.4e-65 251.5 219 62.6
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 5.4e-65 251.5 212 64.6
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 7.0e-65 251.1 212 62.7
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 7.0e-65 251.1 149 81.2
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 9.2e-65 250.8 225 62.2
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 9.2e-65 250.8 149 80.5
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 1.2e-64 250.4 150 79.3
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.2e-64 250.4 215 64.2
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 2.0e-64 249.6 216 62.0
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.7e-64 249.2 210 64.3
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 3.5e-64 248.8 215 63.7
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 4.6e-64 248.4 149 79.2
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 7.8e-64 247.7 211 66.8
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 1.0e-63 247.3 153 79.7
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 1.0e-63 247.3 153 79.7
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 1.0e-63 247.3 220 62.7
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.3e-63 246.9 190 67.4
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 1.3e-63 246.9 200 65.5
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 1.3e-63 246.9 217 63.1
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 5.0e-63 245.0 165 73.9
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 5.0e-63 245.0 150 78.7
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 8.6e-63 244.2 153 78.4
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 1.1e-62 243.8 215 62.8
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 1.5e-62 243.4 149 79.9
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 1.5e-62 243.4 202 66.8
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 1.9e-62 243.0 149 79.2
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 2.5e-62 242.7 216 62.0
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 7.3e-62 241.1 149 81.2
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 7.3e-62 241.1 207 62.3
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 7.3e-62 241.1 207 64.7
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 9.5e-62 240.7 197 65.0
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 1.6e-61 240.0 218 61.0
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 2.8e-61 239.2 207 61.4
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 3.6e-61 238.8 215 63.3
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 3.6e-61 238.8 217 63.1
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 4.7e-61 238.4 147 77.6
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 4.7e-61 238.4 196 62.8
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 6.2e-61 238.0 142 80.3
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 6.2e-61 238.0 150 77.3
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 8.0e-61 237.7 207 64.3
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 1.1e-60 237.3 210 59.0
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.4e-60 236.9 217 60.4
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 3.1e-60 235.7 212 61.8
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 4.0e-60 235.3 147 75.5
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 5.2e-60 235.0 175 65.7
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 6.8e-60 234.6 153 72.5
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.5e-59 233.4 213 62.9
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 1.5e-59 233.4 153 72.5
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 2.6e-59 232.6 156 70.5
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 3.4e-59 232.3 136 81.6
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 5.8e-59 231.5 185 62.7
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 1.3e-58 230.3 148 75.0
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 2.2e-58 229.6 191 62.3
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 2.9e-58 229.2 182 64.3
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 4.9e-58 228.4 200 64.5
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 6.4e-58 228.0 185 63.2
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 8.3e-58 227.6 193 60.6
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 1.1e-57 227.3 179 64.8
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 2.4e-57 226.1 151 72.2
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.7e-56 222.6 147 74.8
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 2.7e-56 222.6 150 70.7
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 3.5e-56 222.2 198 63.6
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 2.3e-55 219.5 150 72.0
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 1.1e-54 217.2 130 82.3
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 1.5e-54 216.9 152 69.1
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 5.6e-54 214.9 149 69.8
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 5.6e-54 214.9 177 63.8
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 9.5e-54 214.2 156 67.9
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 3.6e-53 212.2 188 59.0
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 3.6e-53 212.2 188 59.0
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.8e-52 209.9 190 58.9
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 2.6e-51 206.1 192 58.9
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 2.6e-51 206.1 128 75.8
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 7.6e-51 204.5 169 62.1
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 6.4e-50 201.4 128 74.2
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 8.3e-50 201.1 154 66.2
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 8.3e-50 201.1 149 65.1
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 1.9e-49 199.9 188 54.8
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 2.4e-49 199.5 152 65.8
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 1.3e-47 193.7 225 51.1
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 1.3e-47 193.7 191 52.4
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 3.9e-47 192.2 111 84.7
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 8.6e-47 191.0 150 59.3
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 8.1e-45 184.5 217 53.0
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 5.2e-44 181.8 109 79.8
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 8.9e-44 181.0 155 57.4
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 1.9e-41 173.3 110 78.2
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 2.1e-37 159.8 170 54.7
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 1.5e-30 137.1 83 80.7
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 1.5e-30 137.1 149 52.3
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 2.5e-30 136.3 142 57.7
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 3.3e-30 136.0 152 52.6
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 1.6e-29 133.7 119 61.3
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 6.2e-29 131.7 72 84.7
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 8.1e-29 131.3 146 54.8
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 1.4e-25 120.6 146 41.1
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 2.4e-20 103.2 68 72.1
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 2.4e-20 103.2 68 72.1
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 6.7e-15 85.1 58 63.8
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 4.1e-12 75.9 47 76.6
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 5.8e-11 72.0 107 45.8


User provided reference genes

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