Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g074940 Medicago truncatula HOM05D002545 ORTHO05D002335 4.7e-108 394.4 185 100.0
Medtr2g095160 Medicago truncatula HOM05D002545 ORTHO05D002335 1.0e-33 147.5 100 65.0
Medtr4g079520 Medicago truncatula HOM05D002545 ORTHO05D002335 6.3e-28 128.3 99 58.6
Medtr8g006020 Medicago truncatula HOM05D002545 ORTHO05D002335 1.6e-26 123.6 100 56.0
Medtr7g033295 Medicago truncatula HOM05D002545 ORTHO05D002335 1.9e-24 116.7 101 56.4
Medtr6g016340 Medicago truncatula HOM05D002545 ORTHO05D002335 7.5e-21 104.8 130 39.2
Medtr3g052690 Medicago truncatula HOM05D002545 ORTHO05D002335 3.1e-19 99.4 96 44.8
TPR.G36671 Trifolium pratense HOM05D002545 ORTHO05D002335 3.5e-18 95.9 99 42.4
Medtr2g089160 Medicago truncatula HOM05D002545 ORTHO05D002335 1.3e-17 94.0 126 34.1
Medtr7g052100 Medicago truncatula HOM05D002545 ORTHO05D002335 1.7e-17 93.6 124 37.9
Medtr4g097730 Medicago truncatula HOM05D002545 ORTHO05D002335 5.0e-17 92.0 106 40.6
Medtr1g046260 Medicago truncatula HOM05D002545 ORTHO05D002335 6.5e-17 91.7 94 40.4
Medtr5g054985 Medicago truncatula HOM05D002545 ORTHO05D002335 8.5e-17 91.3 108 37.0
Medtr1g072480 Medicago truncatula HOM05D002545 ORTHO05D002335 1.1e-16 90.9 69 59.4
Medtr5g025040 Medicago truncatula HOM05D002545 ORTHO05D002335 7.2e-16 88.2 99 36.4
Medtr8g024270 Medicago truncatula HOM05D002545 ORTHO05D002335 3.6e-15 85.9 102 36.3
TPR.G37514 Trifolium pratense HOM05D002545 ORTHO05D002335 1.0e-14 84.3 87 41.4
Medtr7g102890 Medicago truncatula HOM05D002545 ORTHO05D002335 1.4e-14 84.0 101 35.6
Medtr2g089320 Medicago truncatula HOM05D002545 ORTHO05D002335 1.8e-14 83.6 87 52.9
Medtr3g031290 Medicago truncatula HOM05D002545 ORTHO05D002335 3.0e-14 82.8 101 39.6
Medtr8g037820 Medicago truncatula HOM05D002545 ORTHO05D002335 3.0e-14 82.8 102 38.2
Medtr2g040320 Medicago truncatula HOM05D002545 ORTHO05D002335 6.8e-14 81.6 107 34.6
Medtr4g061240 Medicago truncatula HOM05D002545 ORTHO05D002335 1.2e-13 80.9 102 35.3
Medtr5g012450 Medicago truncatula HOM05D002545 ORTHO05D002335 1.3e-12 77.4 85 40.0
Medtr8g078210 Medicago truncatula HOM05D002545 ORTHO05D002335 1.7e-12 77.0 109 33.9
Medtr5g014380 Medicago truncatula HOM05D002545 ORTHO05D002335 2.2e-12 76.6 104 32.7
Medtr2g031500 Medicago truncatula HOM05D002545 ORTHO05D002335 4.8e-12 75.5 88 37.5
Medtr5g036930 Medicago truncatula HOM05D002545 ORTHO05D002335 4.8e-12 75.5 84 36.9
Medtr4g022870 Medicago truncatula HOM05D002545 ORTHO05D002335 1.4e-11 73.9 97 34.0
Medtr3g069400 Medicago truncatula HOM05D002545 ORTHO05D002335 1.8e-11 73.6 62 54.8
Medtr6g044010 Medicago truncatula HOM05D002545 ORTHO05D002335 2.4e-11 73.2 90 38.9
Medtr1g055370 Medicago truncatula HOM05D002545 ORTHO05D002335 3.1e-11 72.8 92 38.0
Medtr5g056220 Medicago truncatula HOM05D002545 ORTHO05D002335 4.1e-11 72.4 56 48.2
Medtr3g088390 Medicago truncatula HOM05D002545 ORTHO05D002335 5.4e-11 72.0 88 38.6
Medtr5g054960 Medicago truncatula HOM05D002545 ORTHO05D002335 9.1e-11 71.2 87 36.8
TPR.G33155 Trifolium pratense HOM05D002545 ORTHO05D002335 9.1e-11 71.2 104 32.7
Medtr2g062550 Medicago truncatula HOM05D002545 ORTHO05D002335 1.6e-10 70.5 88 33.0
Medtr4g036525 Medicago truncatula HOM05D002545 ORTHO05D002335 1.6e-10 70.5 80 37.5
TPR.G11793 Trifolium pratense HOM05D002545 ORTHO05D002335 1.6e-10 70.5 96 34.4
Medtr2g087750 Medicago truncatula HOM05D002545 ORTHO05D002335 4.5e-10 68.9 74 41.9
TPR.G29823 Trifolium pratense HOM05D000003 ORTHO05D002335 7.7e-10 68.2 135 29.6
Medtr7g013900 Medicago truncatula HOM05D002545 ORTHO05D002335 3.8e-09 65.9 95 28.4
Medtr4g028790 Medicago truncatula HOM05D002545 ORTHO05D002335 1.1e-08 64.3 45 68.9
Medtr4g033220 Medicago truncatula HOM05D002545 ORTHO05D002335 1.5e-08 63.9 68 41.2
Medtr7g103360 Medicago truncatula HOM05D002545 ORTHO05D002335 1.5e-08 63.9 73 42.5
Medtr5g053460 Medicago truncatula HOM05D002545 ORTHO05D002335 3.2e-08 62.8 74 33.8
Medtr3g068165 Medicago truncatula HOM05D002545 ORTHO05D002335 4.2e-08 62.4 74 33.8
TPR.G14763 Trifolium pratense HOM05D015915 ORTHO05D017839 4.2e-08 62.4 123 24.4
TPR.G35652 Trifolium pratense HOM05D002545 ORTHO05D002335 4.2e-08 62.4 80 32.5
Medtr2g088140 Medicago truncatula HOM05D000147 ORTHO05D002335 9.5e-08 61.2 47 55.3
TPR.G36309 Trifolium pratense HOM05D002545 ORTHO05D002335 1.2e-07 60.8 53 49.1
TPR.G14179 Trifolium pratense HOM05D002545 ORTHO05D002335 2.1e-07 60.1 98 28.6
Medtr5g007390 Medicago truncatula HOM05D000003 ORTHO05D002335 2.8e-07 59.7 97 26.8
Glyma.05G143850 Glycine max HOM05D013446 ORTHO05D017041 4.7e-07 58.9 95 30.5
Medtr3g464640 Medicago truncatula HOM05D002545 ORTHO05D002335 4.7e-07 58.9 63 39.7
Medtr3g070320 Medicago truncatula HOM05D000003 ORTHO05D002335 8.0e-07 58.2 79 35.4
Medtr7g089465 Medicago truncatula HOM05D000003 ORTHO05D002335 8.0e-07 58.2 61 37.7
TPR.G16000 Trifolium pratense HOM05D002545 ORTHO05D002335 8.0e-07 58.2 98 25.5
HanXRQChr15g0497301 Helianthus annuus HOM05D000003 ORTHO05D000004 1.4e-06 57.4 89 31.5
Medtr5g020880 Medicago truncatula HOM05D002545 ORTHO05D002335 2.3e-06 56.6 79 31.6
TPR.G8857 Trifolium pratense HOM05D002545 ORTHO05D002335 2.3e-06 56.6 71 35.2
Glyma.07G126550 Glycine max HOM05D013446 ORTHO05D010885 3.0e-06 56.2 100 32.0
HanXRQChr07g0194271 Helianthus annuus HOM05D000003 ORTHO05D000004 4.0e-06 55.8 91 30.8
HanXRQChr09g0272141 Helianthus annuus HOM05D000003 ORTHO05D000004 5.2e-06 55.5 91 30.8
ECA246G1196 Erigeron canadensis HOM05D000003 ORTHO05D000004 8.8e-06 54.7 90 24.4
HanXRQChr09g0254861 Helianthus annuus HOM05D000003 ORTHO05D000004 8.8e-06 54.7 74 36.5
TPR.G35310 Trifolium pratense HOM05D002545 ORTHO05D002335 8.8e-06 54.7 130 28.5


User provided reference genes

Program Settings