Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 2.0e-79 299.3 176 100.0
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 5.2e-72 274.6 176 93.2
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 6.8e-64 247.7 173 87.3
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 8.8e-64 247.3 176 86.4
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 1.5e-55 219.9 176 75.0
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 3.7e-46 188.7 176 64.8
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 2.9e-38 162.5 175 60.0
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 2.4e-37 159.5 174 59.8
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 3.2e-37 159.1 171 60.8
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 4.1e-37 158.7 171 60.8
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 5.4e-37 158.3 173 58.4
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 7.8e-36 154.5 176 59.1
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 6.6e-35 151.4 173 56.1
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 6.6e-35 151.4 172 57.0
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 5.6e-34 148.3 175 54.9
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 8.1e-33 144.4 173 54.9
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 1.8e-32 143.3 173 56.1
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 2.0e-31 139.8 173 56.1
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 2.6e-31 139.4 173 52.6
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 1.3e-30 137.1 173 54.9
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 1.7e-30 136.7 155 59.4
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 2.9e-30 136.0 173 50.9
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 5.4e-29 131.7 173 57.2
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 1.6e-28 130.2 176 50.6
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 2.1e-28 129.8 173 52.0
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 4.6e-28 128.6 173 53.2
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 1.3e-27 127.1 176 53.4
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 2.3e-27 126.3 173 52.6
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 3.0e-27 125.9 175 49.1
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 8.7e-27 124.4 173 52.6
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 1.5e-26 123.6 174 51.7
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 2.5e-26 122.9 173 46.8
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 1.2e-25 120.6 173 52.6
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 1.6e-25 120.2 173 51.4
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 1.6e-25 120.2 133 60.9
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 2.8e-25 119.4 173 50.3
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 3.6e-25 119.0 151 57.0
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 4.7e-25 118.6 173 54.3
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 4.7e-25 118.6 175 52.6
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 6.2e-25 118.2 159 56.6
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 6.2e-25 118.2 159 56.6
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 8.1e-25 117.9 159 56.6
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 1.1e-24 117.5 159 56.6
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 1.1e-24 117.5 175 51.4
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 1.4e-24 117.1 172 50.0
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.8e-24 116.7 168 48.2
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 3.1e-24 115.9 151 57.6
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 3.1e-24 115.9 172 48.8
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 4.0e-24 115.5 158 57.0
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 5.2e-24 115.2 175 50.9
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 6.9e-24 114.8 173 48.0
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 6.9e-24 114.8 174 52.3
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 1.5e-23 113.6 177 50.3
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 1.5e-23 113.6 173 50.9
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 2.0e-23 113.2 177 46.3
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 3.4e-23 112.5 175 46.9
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 3.4e-23 112.5 175 46.9
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 3.4e-23 112.5 175 46.9
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 7.6e-23 111.3 147 51.7
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 7.6e-23 111.3 134 59.0
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 1.7e-22 110.2 168 49.4
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 2.9e-22 109.4 174 50.0
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 6.4e-22 108.2 173 49.1
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 6.4e-22 108.2 158 53.2
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 8.4e-22 107.8 173 43.9
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 8.4e-22 107.8 123 62.6
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 1.1e-21 107.5 177 47.5
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 1.4e-21 107.1 173 50.3
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 1.4e-21 107.1 173 50.3
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 2.4e-21 106.3 145 53.8
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 4.2e-21 105.5 179 49.7
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 5.4e-21 105.1 110 69.1
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 9.3e-21 104.4 107 67.3
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 1.6e-20 103.6 173 49.1
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 3.5e-20 102.4 174 46.0
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 6.0e-20 101.7 126 54.0
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 7.8e-20 101.3 175 47.4
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 1.3e-19 100.5 137 56.9
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 1.7e-19 100.1 151 52.3
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 6.6e-19 98.2 149 51.0
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 1.5e-18 97.1 152 52.0
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 3.3e-18 95.9 152 50.0
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 9.6e-18 94.4 173 45.7
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 1.6e-17 93.6 145 50.3
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 2.1e-17 93.2 88 73.9
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 8.1e-17 91.3 172 44.2
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 8.1e-17 91.3 133 52.6
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 2.4e-16 89.7 165 47.9
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 2.4e-16 89.7 174 45.4
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 3.1e-16 89.4 136 51.5
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 3.1e-16 89.4 78 78.2
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 1.3e-14 84.0 95 63.2
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 1.9e-13 80.1 92 63.0
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 1.9e-13 80.1 177 42.4
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 1.9e-13 80.1 122 55.7
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 9.3e-13 77.8 96 61.5
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 4.6e-12 75.5 132 40.9
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 7.9e-12 74.7 95 52.6
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 3.0e-11 72.8 164 43.3
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 8.7e-11 71.2 105 50.5
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 4.8e-09 65.5 80 63.8
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 2.4e-08 63.2 96 54.2
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 3.1e-08 62.8 78 62.8
CDE02G3979 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 8.4e-06 54.7 135 33.3


User provided reference genes

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