Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g069910 Medicago truncatula HOM05D007408 ORTHO05D009325 3.8e-81 304.7 142 100.0
TPR.G24816 Trifolium pratense HOM05D007408 ORTHO05D009325 2.7e-63 245.4 145 82.1
Psat4g113200 Pisum sativum HOM05D007408 ORTHO05D009325 1.5e-53 213.0 136 75.7
Lj4g0027659 Lotus japonicus HOM05D007408 ORTHO05D009325 6.1e-47 191.0 140 65.7
Glyma.16G099500 Glycine max HOM05D007408 ORTHO05D009325 9.1e-43 177.2 147 63.3
Phvul.003G281600 Phaseolus vulgaris HOM05D007408 ORTHO05D009325 7.2e-40 167.5 145 60.0
VMungo0251G2162 Vigna mungo HOM05D007408 ORTHO05D009325 3.7e-36 155.2 148 54.1
Lalb_Chr20g0122411 Lupinus albus HOM05D007408 ORTHO05D009325 3.8e-33 145.2 147 57.8
arahy.Tifrunner.gnm1.ann1.24G1QJ Arachis hypogaea HOM05D007408 ORTHO05D009325 1.1e-27 127.1 153 48.4
Cfa008792 Carpinus fangiana HOM05D007408 ORTHO05D009325 1.1e-27 127.1 150 50.7
CiPaw.06G098200 Carya illinoinensis HOM05D007408 ORTHO05D009325 2.0e-26 122.9 151 47.7
Haze_11804 Corylus avellana HOM05D007408 ORTHO05D009325 4.5e-26 121.7 129 57.4
Prupe.1G301300 Prunus persica HOM05D007408 ORTHO05D009325 4.5e-26 121.7 147 43.5
RcHm_v2.0_Chr4g0436431 Rosa chinensis HOM05D007408 ORTHO05D009325 6.5e-25 117.9 144 45.1
TAR629G0610 Trochodendron aralioides HOM05D007408 ORTHO05D009325 3.6e-23 112.1 141 42.6
MD13G1050800 Malus domestica HOM05D007408 ORTHO05D009325 4.7e-23 111.7 147 44.9
TWI79G0837 Tripterygium wilfordii HOM05D007408 ORTHO05D009325 6.1e-23 111.3 147 38.8
FAN17G1226 Fragaria x ananassa HOM05D000085 ORTHO05D000274 1.0e-22 110.5 147 43.5
Cpa.g.sc1.248 Carica papaya HOM05D007408 ORTHO05D009325 5.2e-22 108.2 145 42.1
Potri.008G111500 Populus trichocarpa HOM05D007408 ORTHO05D009325 1.2e-21 107.1 145 42.8
CANSAT64G2960 Cannabis sativa HOM05D007408 ORTHO05D009325 1.5e-21 106.7 163 44.2
Eucgr.B03072 Eucalyptus grandis HOM05D007408 ORTHO05D009325 4.4e-21 105.1 149 39.6
FAN12G0389 Fragaria x ananassa HOM05D000085 ORTHO05D000274 5.7e-21 104.8 133 43.6
PGR119G0146 Punica granatum HOM05D007408 ORTHO05D009325 9.8e-21 104.0 121 49.6
FAN07G2148 Fragaria x ananassa HOM05D000085 ORTHO05D000274 1.7e-20 103.2 133 43.6
Manes.06G075900 Manihot esculenta HOM05D007408 ORTHO05D009325 2.2e-20 102.8 144 38.9
Atru.chr11.1432 Acer truncatum HOM05D007408 ORTHO05D009325 3.7e-20 102.1 153 37.9
FAN22G2286 Fragaria x ananassa HOM05D000227 ORTHO05D001491 4.8e-20 101.7 133 42.9
Thecc.02G364900 Theobroma cacao HOM05D007408 ORTHO05D009325 1.4e-19 100.1 124 46.8
Cc11_g10990 Coffea canephora HOM05D007408 ORTHO05D009325 4.1e-19 98.6 145 40.0
SGA_v2.0_scaffold36G14509 Striga asiatica HOM05D007408 ORTHO05D009325 5.4e-19 98.2 146 43.2
Sabra08G0084200 Salix brachista HOM05D007408 ORTHO05D009325 9.1e-19 97.4 119 47.9
Oeu024124.1 Olea europaea HOM05D007408 ORTHO05D009325 1.2e-18 97.1 114 46.5
Sc11g0002930 Simmondsia chinensis HOM05D007408 ORTHO05D009325 2.7e-18 95.9 151 43.0
THA.LOC104805235 Tarenaya hassleriana HOM05D007408 ORTHO05D009325 1.0e-17 94.0 139 41.0
Gohir.D12G176300 Gossypium hirsutum HOM05D007408 ORTHO05D009325 6.5e-17 91.3 123 42.3
Gorai.008G188700 Gossypium raimondii HOM05D007408 ORTHO05D009325 6.5e-17 91.3 123 42.3
DCAR_026703 Daucus carota HOM05D002818 ORTHO05D003244 8.6e-17 90.9 137 40.1
CsaV3_2G010890 Cucumis sativus L. HOM05D007408 ORTHO05D009325 3.3e-16 89.0 143 38.5
AT3G25597 Arabidopsis thaliana HOM05D007408 ORTHO05D009325 1.6e-15 86.7 143 37.8
BcaC06g31130 Brassica carinata HOM05D007408 ORTHO05D009325 4.7e-15 85.1 140 37.1
Gohir.A12G173800 Gossypium hirsutum HOM05D007408 ORTHO05D009325 4.7e-15 85.1 131 38.9
SalBow8G1270 Salvia bowleyana HOM05D007408 ORTHO05D009325 4.7e-15 85.1 143 38.5
SalBow8G3082 Salvia bowleyana HOM05D007408 ORTHO05D009325 4.7e-15 85.1 143 38.5
THA.LOC104822179 Tarenaya hassleriana HOM05D007408 ORTHO05D009325 8.0e-15 84.3 116 39.7
AL5G14110 Arabidopsis lyrata HOM05D007408 ORTHO05D009325 1.4e-14 83.6 143 37.8
A06p42710 Brassica napus HOM05D007408 ORTHO05D009325 1.8e-14 83.2 140 36.4
Sp2g14870 Schrenkiella parvula HOM05D007408 ORTHO05D009325 1.8e-14 83.2 141 35.5
CARHR146570 Cardamine hirsuta HOM05D007408 ORTHO05D009325 3.0e-14 82.4 143 37.8
HanXRQChr15g0475971 Helianthus annuus HOM05D007408 ORTHO05D009325 5.2e-14 81.6 122 41.8
Sed0018728 Sechium edule HOM05D007408 ORTHO05D009325 5.2e-14 81.6 117 43.6
BcaC03g17274 Brassica carinata HOM05D007408 ORTHO05D009325 6.8e-14 81.3 146 35.6
C02p52180 Brassica napus HOM05D007408 ORTHO05D009325 6.8e-14 81.3 146 35.6
C07p34420 Brassica napus HOM05D007408 ORTHO05D009325 6.8e-14 81.3 140 35.7
BolC2t11303H Brassica oleracea HOM05D007408 ORTHO05D009325 6.8e-14 81.3 146 35.6
BraA06t27184Z Brassica rapa HOM05D007408 ORTHO05D009325 6.8e-14 81.3 140 35.7
HanXRQChr17g0551421 Helianthus annuus HOM05D007408 ORTHO05D009325 6.8e-14 81.3 126 39.7
Lsat_1_v5_gn_3_60200 Lactuca sativa HOM05D007408 ORTHO05D009325 6.8e-14 81.3 119 41.2
A02p33920 Brassica napus HOM05D007408 ORTHO05D009325 1.5e-13 80.1 144 36.1
Solyc05g010130.1 Solanum lycopersicum HOM05D007408 ORTHO05D009325 1.5e-13 80.1 122 41.0
BraA02t08410Z Brassica rapa HOM05D007408 ORTHO05D009325 2.0e-13 79.7 146 35.6
Thhalv10005058m.g Eutrema salsugineum HOM05D007408 ORTHO05D009325 2.6e-13 79.3 141 34.8
Ah.02g127260 Amaranthus hybridus HOM05D007408 ORTHO05D009325 4.4e-13 78.6 139 33.8
BcaC05g26429 Brassica carinata HOM05D007408 ORTHO05D009325 1.3e-12 77.0 114 39.5
BcaC06g33976 Brassica carinata HOM05D007408 ORTHO05D009325 1.3e-12 77.0 140 34.3
HanXRQChr12g0365241 Helianthus annuus HOM05D007408 ORTHO05D009325 1.3e-12 77.0 112 39.3
C05p24760 Brassica napus HOM05D007408 ORTHO05D009325 2.2e-12 76.3 114 39.5
Carub.0005s0338 Capsella rubella HOM05D007408 ORTHO05D009325 2.2e-12 76.3 145 37.2
Ciclev10033573m.g Citrus clementina HOM05D007408 ORTHO05D009325 2.2e-12 76.3 109 39.4
BcaB07g30265 Brassica carinata HOM05D007408 ORTHO05D009325 8.3e-12 74.3 146 34.9
CARHR061510 Cardamine hirsuta HOM05D007408 ORTHO05D009325 1.4e-11 73.6 111 37.8
Migut.L01119 Erythranthe guttata HOM05D007408 ORTHO05D009325 1.4e-11 73.6 126 37.3
AT1G68700 Arabidopsis thaliana HOM05D007408 ORTHO05D009325 2.4e-11 72.8 110 36.4
Sp5g23800 Schrenkiella parvula HOM05D007408 ORTHO05D009325 2.4e-11 72.8 127 31.5
Aqoxy3G03838 Aquilegia oxysepala HOM05D007408 ORTHO05D009325 4.1e-11 72.0 152 33.6
BcaC08g46321 Brassica carinata HOM05D000085 ORTHO05D000274 4.1e-11 72.0 127 35.4
BolC6t39308H Brassica oleracea HOM05D000085 ORTHO05D000274 4.1e-11 72.0 127 35.4
A07p35100 Brassica napus HOM05D000085 ORTHO05D000274 5.4e-11 71.6 127 35.4
C06p41170 Brassica napus HOM05D000085 ORTHO05D000274 5.4e-11 71.6 127 34.6
BraA07t31103Z Brassica rapa HOM05D000085 ORTHO05D000274 5.4e-11 71.6 127 35.4
A09p39710 Brassica napus HOM05D007408 ORTHO05D009325 1.6e-10 70.1 124 37.1
BraA09t39470Z Brassica rapa HOM05D007408 ORTHO05D009325 1.6e-10 70.1 124 37.1
PSO782G1144 Papaver somniferum HOM05D007408 ORTHO05D009325 1.6e-10 70.1 120 35.0
BcaB03g15446 Brassica carinata HOM05D007408 ORTHO05D009325 2.7e-10 69.3 127 33.9
C06p37420 Brassica napus HOM05D007408 ORTHO05D009325 2.7e-10 69.3 128 33.6
AL1G39610 Arabidopsis lyrata HOM05D007408 ORTHO05D009325 3.5e-10 68.9 114 39.5
BcaB03g15828 Brassica carinata HOM05D007408 ORTHO05D009325 3.5e-10 68.9 110 36.4
A07p31850 Brassica napus HOM05D007408 ORTHO05D009325 3.5e-10 68.9 110 37.3
BraA07t30814Z Brassica rapa HOM05D007408 ORTHO05D009325 5.9e-10 68.2 110 37.3
MELO3C020393.2 Cucumis melo HOM05D007408 ORTHO05D009325 5.9e-10 68.2 144 33.3
C03p72700 Brassica napus HOM05D007408 ORTHO05D009325 2.3e-09 66.2 126 34.9
BolC3t19568H Brassica oleracea HOM05D007408 ORTHO05D009325 2.3e-09 66.2 126 34.9
A08p27160 Brassica napus HOM05D007408 ORTHO05D009325 3.8e-09 65.5 126 34.9
Thhalv10009687m.g Eutrema salsugineum HOM05D007408 ORTHO05D009325 3.8e-09 65.5 118 35.6
AT1G26140 Arabidopsis thaliana HOM05D007408 ORTHO05D009325 1.1e-08 63.9 114 35.1
BraA08t34661Z Brassica rapa HOM05D007408 ORTHO05D009325 1.1e-08 63.9 126 34.9
Sp1g22520 Schrenkiella parvula HOM05D007408 ORTHO05D009325 1.1e-08 63.9 118 37.3
CARHR025780 Cardamine hirsuta HOM05D007408 ORTHO05D009325 3.3e-08 62.4 114 37.7
Manes.14G095101 Manihot esculenta HOM05D007408 ORTHO05D009325 4.3e-08 62.0 46 65.2
BcaC08g43155 Brassica carinata HOM05D007408 ORTHO05D009325 7.3e-08 61.2 116 36.2
BolC6t38845H Brassica oleracea HOM05D000085 ORTHO05D000274 4.7e-07 58.5 122 32.0
Carub.0001s2482 Capsella rubella HOM05D007408 ORTHO05D009325 6.1e-07 58.2 114 36.8
HPP92_003114 Vanilla planifolia HOM05D007408 ORTHO05D009325 1.0e-06 57.4 108 38.0
Carub.0002s1524 Capsella rubella HOM05D007408 ORTHO05D009325 4.0e-06 55.5 100 32.0
EL10Ac6g14549 Beta vulgaris HOM05D007408 ORTHO05D009325 5.2e-06 55.1 54 46.3
Lsat_1_v5_gn_8_37901 Lactuca sativa HOM05D007408 ORTHO05D009325 5.2e-06 55.1 126 30.2
Peaxi162Scf00198g00024 Petunia axillaris HOM05D007408 ORTHO05D009325 6.8e-06 54.7 87 41.4


User provided reference genes

Program Settings