Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g069545 Medicago truncatula HOM05D006847 ORTHO05D008685 4.2e-86 321.2 154 100.0
Ca_22680_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 2.8e-74 282.0 154 87.0
Psat4g123400 Pisum sativum HOM05D006847 ORTHO05D008685 1.1e-73 280.0 154 86.4
LjContig00408g0014580 Lotus japonicus HOM05D006847 ORTHO05D008685 2.0e-72 275.8 154 82.5
Medtr8g065720 Medicago truncatula HOM05D006847 ORTHO05D008685 2.5e-70 268.9 154 86.4
arahy.Tifrunner.gnm1.ann1.9XA9EY Arachis hypogaea HOM05D006847 ORTHO05D008685 1.8e-68 262.7 145 83.4
arahy.Tifrunner.gnm1.ann1.B51XMH Arachis hypogaea HOM05D006847 ORTHO05D008685 6.8e-68 260.8 145 82.8
Dinv33999 Davidia involucrata HOM05D006847 ORTHO05D008685 9.8e-67 256.9 152 77.0
Cc11_g11380 Coffea canephora HOM05D006847 ORTHO05D008685 2.2e-66 255.8 146 77.4
Lj6C772T8 Lonicera japonica HOM05D006847 ORTHO05D008685 2.8e-66 255.4 145 78.6
SalBow2G2641 Salvia bowleyana HOM05D006847 ORTHO05D008685 3.7e-66 255.0 144 78.5
Ciclev10031661m.g Citrus clementina HOM05D006847 ORTHO05D008685 3.1e-65 251.9 148 76.4
FAN17G2474 Fragaria x ananassa HOM05D006847 ORTHO05D008685 4.1e-65 251.5 145 76.6
DCAR_023729 Daucus carota HOM05D006847 ORTHO05D008685 5.4e-65 251.1 141 80.1
PGR119G0337 Punica granatum HOM05D006847 ORTHO05D008685 5.4e-65 251.1 145 78.6
MD13G1054900 Malus domestica HOM05D006847 ORTHO05D008685 9.1e-65 250.4 145 78.6
Cpa.g.c44692 Carica papaya HOM05D006847 ORTHO05D008685 2.0e-64 249.2 142 79.6
FAN12G2539 Fragaria x ananassa HOM05D006847 ORTHO05D008685 2.0e-64 249.2 145 75.9
Glyma.02G124600 Glycine max HOM05D006847 ORTHO05D008685 2.0e-64 249.2 144 79.9
GSVIVG01010124001 Vitis vinifera HOM05D006847 ORTHO05D008685 2.0e-64 249.2 145 75.2
ClCG05G023430 Citrullus lanatus HOM05D006847 ORTHO05D008685 2.7e-64 248.8 145 76.6
Actinidia31921 Actinidia chinensis HOM05D006847 ORTHO05D008685 3.5e-64 248.4 145 74.5
CiPaw.06G095800 Carya illinoinensis HOM05D006847 ORTHO05D008685 4.5e-64 248.1 144 76.4
Thecc.02G320200 Theobroma cacao HOM05D006847 ORTHO05D008685 4.5e-64 248.1 144 77.1
Cfa008830 Carpinus fangiana HOM05D006847 ORTHO05D008685 5.9e-64 247.7 146 74.0
Eucgr.G02408 Eucalyptus grandis HOM05D006847 ORTHO05D008685 5.9e-64 247.7 141 79.4
Actinidia24040 Actinidia chinensis HOM05D006847 ORTHO05D008685 7.7e-64 247.3 145 74.5
COL.COLO4_27774 Corchorus olitorius HOM05D006847 ORTHO05D008685 7.7e-64 247.3 141 78.0
Psat2g097440 Pisum sativum HOM05D006847 ORTHO05D008685 7.7e-64 247.3 142 78.2
Haze_11844 Corylus avellana HOM05D006847 ORTHO05D008685 1.0e-63 246.9 144 76.4
FAN22G0943 Fragaria x ananassa HOM05D006847 ORTHO05D008685 1.0e-63 246.9 145 74.5
Oeu001640.1 Olea europaea HOM05D006847 ORTHO05D008685 1.3e-63 246.5 145 75.9
Sed0008138 Sechium edule HOM05D006847 ORTHO05D008685 1.3e-63 246.5 145 75.2
Duzib268G0361 Durio zibethinus HOM05D006847 ORTHO05D008685 2.3e-63 245.7 146 74.7
Atru.chr11.1527 Acer truncatum HOM05D006847 ORTHO05D008685 2.9e-63 245.4 155 72.9
Ca_05192_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 2.9e-63 245.4 148 76.4
Gorai.005G148200 Gossypium raimondii HOM05D006847 ORTHO05D008685 2.9e-63 245.4 146 74.0
Lsat_1_v5_gn_8_36700 Lactuca sativa HOM05D006847 ORTHO05D008685 2.9e-63 245.4 144 77.1
MBI14_g08222_MAGBIO Magnolia biondii HOM05D006847 ORTHO05D008685 2.9e-63 245.4 146 75.3
Migut.L01151 Erythranthe guttata HOM05D006847 ORTHO05D008685 3.8e-63 245.0 144 74.3
Gohir.A03G107200 Gossypium hirsutum HOM05D006847 ORTHO05D008685 3.8e-63 245.0 146 74.7
Gohir.D02G132300 Gossypium hirsutum HOM05D006847 ORTHO05D008685 3.8e-63 245.0 146 74.0
TPR.G20006 Trifolium pratense HOM05D006847 ORTHO05D008685 3.8e-63 245.0 142 76.1
Actinidia19898 Actinidia chinensis HOM05D006847 ORTHO05D008685 5.0e-63 244.6 145 74.5
MELO3C012175.2 Cucumis melo HOM05D006847 ORTHO05D008685 5.0e-63 244.6 153 71.9
Sed0007808 Sechium edule HOM05D006847 ORTHO05D008685 5.0e-63 244.6 145 73.8
CsaV3_5G033580 Cucumis sativus L. HOM05D006847 ORTHO05D008685 6.6e-63 244.2 153 71.9
Medtr0328s0040 Medicago truncatula HOM05D006847 ORTHO05D008685 6.6e-63 244.2 142 76.8
TAR374G0132 Trochodendron aralioides HOM05D006847 ORTHO05D008685 6.6e-63 244.2 145 75.2
Aqoxy3G03766 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 8.6e-63 243.8 155 72.3
HanXRQChr08g0215061 Helianthus annuus HOM05D006847 ORTHO05D008685 8.6e-63 243.8 144 74.3
TAR622G1172 Trochodendron aralioides HOM05D006847 ORTHO05D008685 8.6e-63 243.8 143 76.2
TWI75G1304 Tripterygium wilfordii HOM05D006847 ORTHO05D008685 1.1e-62 243.4 140 77.1
MD16G1053800 Malus domestica HOM05D006847 ORTHO05D008685 1.5e-62 243.0 141 78.0
Lj3C1026T6 Lonicera japonica HOM05D006847 ORTHO05D008685 3.3e-62 241.9 145 73.1
Lj2g0006896 Lotus japonicus HOM05D006847 ORTHO05D008685 3.3e-62 241.9 145 76.6
Potri.008G113000 Populus trichocarpa HOM05D006847 ORTHO05D008685 5.5e-62 241.1 145 73.8
Sopen05g006440 Solanum pennellii HOM05D006847 ORTHO05D008685 5.5e-62 241.1 145 75.2
CSS0010285 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 7.2e-62 240.7 140 75.7
CANSAT64G2316 Cannabis sativa HOM05D006847 ORTHO05D008685 7.2e-62 240.7 145 73.8
MSTRG.7721 Avicennia marina HOM05D006847 ORTHO05D008685 9.5e-62 240.4 153 72.5
Migut.N00803 Erythranthe guttata HOM05D006847 ORTHO05D008685 9.5e-62 240.4 146 74.0
ECA233G1196 Erigeron canadensis HOM05D006847 ORTHO05D008685 1.2e-61 240.0 144 75.0
Manes.14G092000 Manihot esculenta HOM05D006847 ORTHO05D008685 1.6e-61 239.6 141 74.5
Nitab4.5_0002309g0040 Nicotiana tabacum HOM05D006847 ORTHO05D008685 2.1e-61 239.2 148 72.3
Aqoxy3G00572 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 2.8e-61 238.8 145 71.7
PGSC0003DMG400019650 Solanum tuberosum HOM05D006847 ORTHO05D008685 2.8e-61 238.8 145 75.2
Potri.010G136300 Populus trichocarpa HOM05D006847 ORTHO05D008685 1.4e-60 236.5 141 73.0
PGSC0003DMG400001803 Solanum tuberosum HOM05D006847 ORTHO05D008685 1.8e-60 236.1 144 73.6
CAN.G869.31 Capsicum annuum HOM05D006847 ORTHO05D008685 5.2e-60 234.6 145 72.4
Nitab4.5_0000259g0050 Nicotiana tabacum HOM05D006847 ORTHO05D008685 8.9e-60 233.8 148 70.9
Oeu021813.1 Olea europaea HOM05D006847 ORTHO05D008685 8.9e-60 233.8 146 72.6
Sopen01g032850 Solanum pennellii HOM05D006847 ORTHO05D008685 1.5e-59 233.0 141 73.0
Hma1.2p1_1348F.1_g277280 Hydrangea macrophylla HOM05D006847 ORTHO05D008685 3.7e-58 228.4 152 71.1
HPP92_020537 Vanilla planifolia HOM05D006847 ORTHO05D008685 3.2e-57 225.3 141 70.9
ATR0691G250 Amborella trichopoda HOM05D006847 ORTHO05D008685 5.9e-56 221.1 146 66.4
ATR0691G163 Amborella trichopoda HOM05D006847 ORTHO05D008685 2.3e-55 219.2 146 66.4
Pp3c6_17060 Physcomitrium patens HOM05D006847 ORTHO05D008685 5.8e-51 204.5 143 63.6
HPP92_020469 Vanilla planifolia HOM05D006847 ORTHO05D008685 5.8e-51 204.5 148 61.5
Nn4g23575 Nelumbo nucifera HOM05D006847 ORTHO05D008685 7.5e-51 204.1 126 71.4
Mapoly0024s0128 Marchantia polymorpha HOM05D006847 ORTHO05D008685 3.7e-50 201.8 155 58.1
HPP92_026164 Vanilla planifolia HOM05D006847 ORTHO05D008685 3.7e-50 201.8 143 64.3
Pp3c27_4530 Physcomitrium patens HOM05D006847 ORTHO05D008685 7.0e-49 197.6 144 59.0
Pp3c5_12950 Physcomitrium patens HOM05D006847 ORTHO05D008685 9.2e-49 197.2 141 61.7
AagrBONN_evm.TU.Sc2ySwM_368.2780 Anthoceros agrestis HOM05D006847 ORTHO05D008685 2.0e-48 196.1 143 62.9
Pp3c4_7760 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.3e-47 193.4 143 60.8
SMO198G0052 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 1.3e-47 193.4 141 56.7
Pp3c3_23290 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.5e-46 189.9 145 57.9
Pp3c16_11950 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.2e-37 160.2 144 49.3
Solyc05g010630.4 Solanum lycopersicum HOM05D006847 ORTHO05D008685 1.1e-33 147.1 92 73.9
AagrBONN_evm.TU.Sc2ySwM_117.3731 Anthoceros agrestis HOM05D006847 ORTHO05D008685 3.5e-32 142.1 110 57.3
Sabra10G0104800 Salix brachista HOM05D006847 ORTHO05D008685 7.6e-27 124.4 110 55.5
RcHm_v2.0_Chr4g0437071 Rosa chinensis HOM05D006847 ORTHO05D008685 6.0e-24 114.8 65 72.3
arahy.Tifrunner.gnm1.ann1.JA47JZ Arachis hypogaea HOM05D006847 ORTHO05D008685 2.0e-19 99.8 48 87.5
MCO10G065 Micromonas commoda HOM05D006847 ORTHO05D008685 2.1e-13 79.7 144 35.4
Cre06.g263550 Chlamydomonas reinhardtii HOM05D006847 ORTHO05D008685 1.4e-12 77.0 127 34.6
TPR.G29773 Trifolium pratense HOM05D006847 ORTHO05D008685 4.5e-11 72.0 34 94.1
CSS0031083 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 4.2e-09 65.5 35 74.3
FvH4_4g28930 Fragaria vesca HOM05D006847 ORTHO05D008685 4.6e-08 62.0 35 68.6


User provided reference genes

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