Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g068560 Medicago truncatula HOM05D007889 ORTHO05D009987 1.6e-40 169.1 91 100.0
Psat4g119800 Pisum sativum HOM05D007889 ORTHO05D009987 2.6e-27 125.2 87 79.3
Ca_22615_v3 Cicer arietinum L. HOM05D007889 ORTHO05D009987 5.8e-27 124.0 92 78.3
Lj4g0025467 Lotus japonicus HOM05D007889 ORTHO05D009987 2.9e-18 95.1 87 63.2
CANSAT01G1217 Cannabis sativa HOM05D007889 ORTHO05D009987 1.0e-15 86.7 97 61.9
Ah.02g123520 Amaranthus hybridus HOM05D007889 ORTHO05D009987 1.4e-15 86.3 85 62.4
QL06p035849 Quercus lobata HOM05D007889 ORTHO05D009987 1.4e-15 86.3 99 56.6
CiPaw.07G047100 Carya illinoinensis HOM05D007889 ORTHO05D009987 5.1e-15 84.3 95 56.8
PGR102G1376 Punica granatum HOM05D007889 ORTHO05D009987 5.1e-15 84.3 71 66.2
CSS0006316 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 8.8e-15 83.6 95 56.8
CSS0045661 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 8.8e-15 83.6 95 56.8
Cc07_g14040 Coffea canephora HOM05D007889 ORTHO05D009987 1.5e-14 82.8 68 69.1
Haze_03881 Corylus avellana HOM05D007889 ORTHO05D009987 1.5e-14 82.8 94 56.4
unitig_32.g11801 Utricularia gibba HOM05D007889 ORTHO05D009987 1.5e-14 82.8 94 54.3
Manes.13G100900 Manihot esculenta HOM05D007889 ORTHO05D009987 1.9e-14 82.4 94 55.3
Lsat_1_v5_gn_4_143420 Lactuca sativa HOM05D007889 ORTHO05D009987 3.3e-14 81.6 97 53.6
Gohir.A02G144900 Gossypium hirsutum HOM05D007889 ORTHO05D009987 4.3e-14 81.3 92 55.4
Gohir.D03G035700 Gossypium hirsutum HOM05D007889 ORTHO05D009987 4.3e-14 81.3 92 55.4
Duzib147G1657 Durio zibethinus HOM05D007889 ORTHO05D009987 7.4e-14 80.5 92 54.3
FvH4_1g19600 Fragaria vesca HOM05D007889 ORTHO05D009987 7.4e-14 80.5 89 57.3
FAN19G1328 Fragaria x ananassa HOM05D007889 ORTHO05D009987 7.4e-14 80.5 89 57.3
Gorai.003G037300 Gossypium raimondii HOM05D007889 ORTHO05D009987 7.4e-14 80.5 92 55.4
AL8G43080 Arabidopsis lyrata HOM05D007889 ORTHO05D009987 1.3e-13 79.7 90 53.3
Dinv36939 Davidia involucrata HOM05D007889 ORTHO05D009987 1.3e-13 79.7 75 62.7
FAN28G0932 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.3e-13 79.7 89 56.2
TWI74G1088 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 1.3e-13 79.7 91 56.0
MELO3C032898.2 Cucumis melo HOM05D007889 ORTHO05D009987 2.2e-13 79.0 91 58.2
Thecc.01G089900 Theobroma cacao HOM05D007889 ORTHO05D009987 2.2e-13 79.0 91 53.8
Carub.0008s2635 Capsella rubella HOM05D007889 ORTHO05D009987 2.8e-13 78.6 86 54.7
Cpa.g.sc55.18 Carica papaya HOM05D007889 ORTHO05D009987 2.8e-13 78.6 98 52.0
ECA232G4810 Erigeron canadensis HOM05D007889 ORTHO05D009987 4.8e-13 77.8 89 52.8
RcHm_v2.0_Chr2g0111151 Rosa chinensis HOM05D007889 ORTHO05D009987 4.8e-13 77.8 92 54.3
Thhalv10005325m.g Eutrema salsugineum HOM05D007889 ORTHO05D009987 8.2e-13 77.0 89 51.7
EL10Ac6g15200 Beta vulgaris HOM05D007889 ORTHO05D009987 1.1e-12 76.6 66 66.7
FAN23G2864 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.1e-12 76.6 89 53.9
FAN26G2710 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.1e-12 76.6 89 53.9
COL.COLO4_27358 Corchorus olitorius HOM05D007889 ORTHO05D009987 1.4e-12 76.3 86 55.8
Oeu012264.1 Olea europaea HOM05D007889 ORTHO05D009987 1.4e-12 76.3 78 59.0
THA.LOC109116914 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 1.4e-12 76.3 89 53.9
Atru.chr3.1237 Acer truncatum HOM05D007889 ORTHO05D009987 1.8e-12 75.9 91 54.9
Sp2g28580 Schrenkiella parvula HOM05D007889 ORTHO05D009987 1.8e-12 75.9 89 51.7
AT5G65495 Arabidopsis thaliana HOM05D007889 ORTHO05D009987 2.4e-12 75.5 89 51.7
MSTRG.15685 Avicennia marina HOM05D007889 ORTHO05D009987 2.4e-12 75.5 90 54.4
Lalb_Chr05g0228531 Lupinus albus HOM05D007889 ORTHO05D009987 3.1e-12 75.1 75 60.0
Aa31LG1G16500 Aethionema arabicum HOM05D007889 ORTHO05D009987 4.1e-12 74.7 87 52.9
Solyc11g010680.4 Solanum lycopersicum HOM05D007889 ORTHO05D009987 4.1e-12 74.7 68 64.7
BraA06t26160Z Brassica rapa HOM05D007889 ORTHO05D009987 5.3e-12 74.3 90 50.0
AUR62003668 Chenopodium quinoa HOM05D007889 ORTHO05D009987 5.3e-12 74.3 85 55.3
Manes.12G125800 Manihot esculenta HOM05D007889 ORTHO05D009987 5.3e-12 74.3 90 52.2
TWI77G0910 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 9.1e-12 73.6 91 50.5
Sopen11g005480 Solanum pennellii HOM05D007889 ORTHO05D009987 1.2e-11 73.2 62 69.4
BcaC01g02781 Brassica carinata HOM05D007889 ORTHO05D009987 1.5e-11 72.8 90 48.9
C03p60490 Brassica napus HOM05D007889 ORTHO05D009987 1.5e-11 72.8 90 48.9
BolC3t18310H Brassica oleracea HOM05D007889 ORTHO05D009987 1.5e-11 72.8 90 48.9
Peaxi162Scf00474g00715 Petunia axillaris HOM05D007889 ORTHO05D009987 2.0e-11 72.4 90 56.7
PGSC0003DMG402016199 Solanum tuberosum HOM05D007889 ORTHO05D009987 2.0e-11 72.4 63 66.7
CsaV3_6G044960 Cucumis sativus L. HOM05D007889 ORTHO05D009987 2.6e-11 72.0 86 57.0
Nitab4.5_0006217g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 2.6e-11 72.0 80 53.8
SGA_v2.0_scaffold195G40857 Striga asiatica HOM05D007889 ORTHO05D009987 2.6e-11 72.0 73 60.3
Rhsim10G0173200 Rhododendron simsii HOM05D007889 ORTHO05D009987 3.4e-11 71.6 61 68.9
Actinidia25305 Actinidia chinensis HOM05D007889 ORTHO05D009987 4.5e-11 71.2 66 65.2
Cfa006876 Carpinus fangiana HOM05D007889 ORTHO05D009987 4.5e-11 71.2 95 51.6
THA.LOC109116122 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 7.7e-11 70.5 64 64.1
Nitab4.5_0006221g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.0e-10 70.1 73 56.2
Prupe.6G202300 Prunus persica HOM05D007889 ORTHO05D009987 1.3e-10 69.7 96 49.0
Migut.K00803 Erythranthe guttata HOM05D007889 ORTHO05D009987 2.2e-10 68.9 76 55.3
SalBow3G4637 Salvia bowleyana HOM05D007889 ORTHO05D009987 5.0e-10 67.8 63 65.1
Ciclev10026840m.g Citrus clementina HOM05D007889 ORTHO05D009987 2.5e-09 65.5 66 59.1
Eucgr.L00470 Eucalyptus grandis HOM05D007889 ORTHO05D009987 3.2e-09 65.1 66 57.6
Nitab4.5_0000902g0320 Nicotiana tabacum HOM05D007889 ORTHO05D009987 4.2e-09 64.7 91 47.3
PSO541G6452 Papaver somniferum HOM05D007889 ORTHO05D009987 4.2e-09 64.7 67 58.2
Nitab4.5_0007872g0020 Nicotiana tabacum HOM05D007889 ORTHO05D009987 7.2e-09 63.9 89 47.2
Aqoxy5G01377 Aquilegia oxysepala HOM05D007889 ORTHO05D009987 6.1e-08 60.8 68 54.4
vmacro08762 Vaccinium macrocarpon HOM05D007889 ORTHO05D009987 4.4e-06 54.7 50 64.0
Eucgr.H04722 Eucalyptus grandis HOM05D007889 ORTHO05D009987 9.7e-06 53.5 100 41.0


User provided reference genes

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