Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g068220 Medicago truncatula HOM05D007191 ORTHO05D009370 5.5e-192 674.1 331 100.0
TPR.G29816 Trifolium pratense HOM05D007191 ORTHO05D009370 4.3e-160 568.2 338 83.7
Ca_22623_v3 Cicer arietinum L. HOM05D007191 ORTHO05D009370 1.5e-157 559.7 339 84.1
Psat4g117600 Pisum sativum HOM05D007191 ORTHO05D009370 3.0e-153 545.4 334 82.0
Lj4g0026970 Lotus japonicus HOM05D007191 ORTHO05D009370 5.4e-147 524.6 340 80.0
Glyma.08G276900 Glycine max HOM05D007191 ORTHO05D009370 5.6e-144 514.6 324 79.3
Phvul.003G287700 Phaseolus vulgaris HOM05D007191 ORTHO05D009370 8.4e-140 500.7 325 77.8
VMungo0251G2065 Vigna mungo HOM05D007191 ORTHO05D009370 1.9e-139 499.6 308 81.5
Lalb_Chr16g0392111 Lupinus albus HOM05D007191 ORTHO05D009370 1.3e-137 493.4 341 74.5
arahy.Tifrunner.gnm1.ann1.DV4H7C Arachis hypogaea HOM05D007191 ORTHO05D009370 2.3e-137 492.7 351 73.5
arahy.Tifrunner.gnm1.ann1.6T17AW Arachis hypogaea HOM05D007191 ORTHO05D009370 7.1e-123 444.5 348 69.3
QL06p036361 Quercus lobata HOM05D007191 ORTHO05D009370 5.1e-121 438.3 299 73.9
Dinv13563 Davidia involucrata HOM05D007191 ORTHO05D009370 3.4e-117 425.6 284 73.9
GSVIVG01003951001 Vitis vinifera HOM05D007191 ORTHO05D003232 7.6e-117 424.5 285 73.0
Dinv36956 Davidia involucrata HOM05D007191 ORTHO05D009370 1.7e-116 423.3 284 72.9
Prupe.6G204900 Prunus persica HOM05D007191 ORTHO05D009370 6.4e-116 421.4 315 68.3
Thecc.01G088100 Theobroma cacao HOM05D007191 ORTHO05D009370 1.4e-115 420.2 284 71.5
Atru.chr3.1215 Acer truncatum HOM05D007191 ORTHO05D009370 1.6e-114 416.8 320 66.6
Duzib147G1243 Durio zibethinus HOM05D007191 ORTHO05D009370 2.1e-114 416.4 284 71.5
CSS0046556 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 4.6e-114 415.2 284 70.4
COL.COLO4_27378 Corchorus olitorius HOM05D007191 ORTHO05D009370 4.6e-114 415.2 282 73.0
Gohir.A11G207400 Gossypium hirsutum HOM05D007191 ORTHO05D009370 6.0e-114 414.8 284 71.1
MD01G1041100 Malus domestica HOM05D007191 ORTHO05D009370 7.9e-114 414.5 282 72.3
CiPaw.07G045700 Carya illinoinensis HOM05D007191 ORTHO05D009370 6.7e-113 411.4 280 71.4
FvH4_1g19321 Fragaria vesca HOM05D007191 ORTHO05D009370 1.5e-112 410.2 306 66.7
Gorai.007G232000 Gossypium raimondii HOM05D007191 ORTHO05D009370 2.5e-112 409.5 284 70.8
Gohir.D11G215700 Gossypium hirsutum HOM05D007191 ORTHO05D009370 5.6e-112 408.3 284 70.8
Actinidia25299 Actinidia chinensis HOM05D007191 ORTHO05D009370 2.1e-111 406.4 283 70.7
Ciclev10025907m.g Citrus clementina HOM05D007191 ORTHO05D009370 2.1e-111 406.4 285 70.5
RcHm_v2.0_Chr2g0110691 Rosa chinensis HOM05D007191 ORTHO05D003232 2.4e-110 402.9 310 65.8
CANSAT01G2982 Cannabis sativa HOM05D007191 ORTHO05D009370 4.0e-110 402.1 284 69.7
Manes.13G101800 Manihot esculenta HOM05D007191 ORTHO05D009370 5.3e-110 401.7 285 68.1
FAN19G0835 Fragaria x ananassa HOM05D007191 ORTHO05D000122 9.0e-110 401.0 307 65.1
FAN19G2137 Fragaria x ananassa HOM05D007191 ORTHO05D000122 2.0e-109 399.8 307 65.1
Manes.13G092280 Manihot esculenta HOM05D007191 ORTHO05D009370 3.4e-109 399.1 285 67.0
Cpa.g.sc55.6 Carica papaya HOM05D007191 ORTHO05D009370 4.5e-109 398.7 281 70.1
TWI74G0882 Tripterygium wilfordii HOM05D007191 ORTHO05D009370 8.4e-108 394.4 299 66.2
BcaNung05371 Brassica carinata HOM05D007191 ORTHO05D009370 4.2e-107 392.1 315 61.3
Lsat_1_v5_gn_4_142441 Lactuca sativa HOM05D007191 ORTHO05D009370 4.2e-107 392.1 284 67.3
Sopen11g005640 Solanum pennellii HOM05D007191 ORTHO05D009370 4.2e-107 392.1 282 67.0
Nitab4.5_0000402g0060 Nicotiana tabacum HOM05D007191 ORTHO05D009370 5.5e-107 391.7 283 66.4
CsaV3_3G006990 Cucumis sativus L. HOM05D007191 ORTHO05D009370 7.1e-107 391.3 281 69.4
vmacro13023 Vaccinium macrocarpon HOM05D007191 ORTHO05D009370 9.3e-107 391.0 292 67.1
Solyc11g010900.2 Solanum lycopersicum HOM05D007191 ORTHO05D009370 2.1e-106 389.8 322 60.2
C01p01190 Brassica napus HOM05D007191 ORTHO05D009370 3.5e-106 389.0 314 61.1
Thhalv10025567m.g Eutrema salsugineum HOM05D007191 ORTHO05D009370 6.0e-106 388.3 283 67.1
BolC1t00117H Brassica oleracea HOM05D007191 ORTHO05D009370 1.3e-105 387.1 314 61.1
HanXRQChr09g0259541 Helianthus annuus HOM05D007191 ORTHO05D009370 1.3e-105 387.1 284 68.0
MBI16_g30311_MAGBIO Magnolia biondii HOM05D007191 ORTHO05D009370 1.3e-105 387.1 312 63.1
A01p01070 Brassica napus HOM05D007191 ORTHO05D009370 1.8e-105 386.7 318 61.0
BraA01t00105Z Brassica rapa HOM05D007191 ORTHO05D009370 1.8e-105 386.7 318 61.0
BcaNung00953 Brassica carinata HOM05D007191 ORTHO05D009370 2.3e-105 386.3 314 61.1
Haze_03901 Corylus avellana HOM05D007191 ORTHO05D009370 3.0e-105 386.0 354 59.0
AT4G38020 Arabidopsis thaliana HOM05D007191 ORTHO05D009370 5.1e-105 385.2 281 66.2
Eucgr.H02435 Eucalyptus grandis HOM05D007191 ORTHO05D009370 8.7e-105 384.4 282 67.7
THA.LOC104804178 Tarenaya hassleriana HOM05D007191 ORTHO05D009370 1.5e-104 383.6 283 66.1
Carub.0007s0220 Capsella rubella HOM05D007191 ORTHO05D009370 1.9e-104 383.3 281 67.3
ClCG10G008240 Citrullus lanatus HOM05D007191 ORTHO05D009370 3.3e-104 382.5 282 68.8
MELO3C014951.2 Cucumis melo HOM05D007191 ORTHO05D009370 3.3e-104 382.5 281 68.7
Potri.005G147600 Populus trichocarpa HOM05D007191 ORTHO05D009370 3.3e-104 382.5 284 66.5
Sp7g35660 Schrenkiella parvula HOM05D007191 ORTHO05D009370 5.7e-104 381.7 282 66.7
Peaxi162Scf00085g00523 Petunia axillaris HOM05D007191 ORTHO05D009370 2.1e-103 379.8 284 65.5
Sabra05G0118000 Salix brachista HOM05D007191 ORTHO05D009370 3.7e-103 379.0 289 66.1
Aqoxy6G01485 Aquilegia oxysepala HOM05D007191 ORTHO05D009370 1.8e-102 376.7 284 63.4
AL7G12620 Arabidopsis lyrata HOM05D007191 ORTHO05D009370 5.3e-102 375.2 283 66.1
CARHR246430 Cardamine hirsuta HOM05D007191 ORTHO05D009370 1.5e-101 373.6 283 65.4
Cfa006863 Carpinus fangiana HOM05D007191 ORTHO05D000122 4.5e-101 372.1 365 57.3
PSO675G0552 Papaver somniferum HOM05D007191 ORTHO05D009370 4.5e-101 372.1 283 64.0
AUR62003688 Chenopodium quinoa HOM05D007191 ORTHO05D009370 1.3e-100 370.5 284 64.1
Oeu017115.1 Olea europaea HOM05D007191 ORTHO05D009370 2.5e-99 366.3 356 53.7
AUR62018000 Chenopodium quinoa HOM05D007191 ORTHO05D009370 2.1e-98 363.2 284 62.7
PSO541G2681 Papaver somniferum HOM05D007191 ORTHO05D009370 1.8e-97 360.1 283 61.8
Aa31LG6G14960 Aethionema arabicum HOM05D007191 ORTHO05D009370 3.3e-96 355.9 306 58.5
CDE04G1458 Ceratophyllum demersum HOM05D007191 ORTHO05D009370 6.3e-95 351.7 311 57.6
Ah.03g143260 Amaranthus hybridus HOM05D007191 ORTHO05D009370 1.4e-94 350.5 295 59.7
MSTRG.23388 Avicennia marina HOM05D007191 ORTHO05D009370 2.6e-93 346.3 285 58.9
Sed0016887 Sechium edule HOM05D007191 ORTHO05D009370 5.9e-93 345.1 284 63.0
Nitab4.5_0005446g0010 Nicotiana tabacum HOM05D007191 ORTHO05D009370 2.9e-92 342.8 283 60.8
Nn5g29827 Nelumbo nucifera HOM05D007191 ORTHO05D009370 1.1e-91 340.9 313 57.5
Migut.H02278 Erythranthe guttata HOM05D007191 ORTHO05D009370 1.0e-89 334.3 341 51.9
SalBow3G4077 Salvia bowleyana HOM05D007191 ORTHO05D009370 3.9e-89 332.4 302 57.6
DCAR_003441 Daucus carota HOM05D007191 ORTHO05D003232 1.1e-88 330.9 258 64.7
CAN.G1771.10 Capsicum annuum HOM05D007191 ORTHO05D009370 5.7e-88 328.6 248 63.7
Sc03g0000490 Simmondsia chinensis HOM05D007191 ORTHO05D009370 6.9e-86 321.6 274 59.1
Os03g0685100 Oryza sativa ssp. japonica HOM05D007191 ORTHO05D009370 1.9e-83 313.5 312 52.9
SGA_v2.0_scaffold108G30936 Striga asiatica HOM05D007191 ORTHO05D009370 2.1e-82 310.1 267 55.8
ECA232G3284 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.6e-80 303.1 259 59.8
unitig_27.g25347 Utricularia gibba HOM05D007191 ORTHO05D009370 3.3e-80 302.8 281 55.9
Lj2A526T20 Lonicera japonica HOM05D007191 ORTHO05D009370 7.4e-80 301.6 347 49.6
HPP92_014152 Vanilla planifolia HOM05D007191 ORTHO05D009370 3.1e-78 296.2 271 57.2
HPP92_014172 Vanilla planifolia HOM05D007191 ORTHO05D009370 1.0e-76 291.2 282 55.3
PGSC0003DMG400016118 Solanum tuberosum HOM05D007191 ORTHO05D009370 1.6e-74 283.9 200 66.5
Zm00001eb053350 Zea mays HOM05D007191 ORTHO05D009370 2.2e-71 273.5 264 53.4
Pp3c5_6200 Physcomitrium patens HOM05D007191 ORTHO05D009370 1.8e-70 270.4 291 48.8
SMO364G0498 Selaginella moellendorffii HOM05D007191 ORTHO05D009370 8.5e-68 261.5 307 41.4
Mapoly0036s0111 Marchantia polymorpha HOM05D007191 ORTHO05D009370 1.6e-61 240.7 314 44.9
CBR_g31860 Chara braunii HOM05D000601 ORTHO05D000407 8.0e-58 228.4 284 41.5
Pp3c5_6210 Physcomitrium patens HOM05D007191 ORTHO05D009370 6.3e-55 218.8 210 51.0
AUR62043608 Chenopodium quinoa HOM05D007191 ORTHO05D009370 2.9e-52 209.9 144 66.7
PGR102G1719 Punica granatum HOM05D007191 ORTHO05D009370 3.6e-50 203.0 167 59.9
Cc00_g34880 Coffea canephora HOM05D007191 ORTHO05D009370 1.2e-48 198.0 153 60.1
AUR62014153 Chenopodium quinoa HOM05D007191 ORTHO05D002709 3.7e-47 193.0 136 64.7
MCO07G132 Micromonas commoda HOM05D007191 ORTHO05D009370 6.4e-47 192.2 320 37.2
Cre17.g744947 Chlamydomonas reinhardtii HOM05D007191 ORTHO05D009370 6.8e-41 172.2 359 32.6
PRCOL_00003319 Prasinoderma coloniale HOM05D007191 ORTHO05D009370 9.5e-35 151.8 295 35.3
SEGI_38116 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 2.4e-30 137.1 167 44.9
SEGI_29034 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 4.3e-27 126.3 136 48.5
Cc07_g13870 Coffea canephora HOM05D007191 ORTHO05D003232 1.3e-20 104.8 67 68.7
RcHm_v2.0_Chr6g0269301 Rosa chinensis HOM05D007191 ORTHO05D009370 4.3e-19 99.8 99 49.5
Cc07_g13860 Coffea canephora HOM05D007191 ORTHO05D009370 6.9e-17 92.4 74 55.4
Ca_28666_v3 Cicer arietinum L. HOM05D005801 ORTHO05D009370 1.9e-11 74.3 152 34.2
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 1.2e-08 65.1 148 31.8
CSS0007107 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 8.4e-07 58.9 61 45.9
CSS0022959 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 8.4e-07 58.9 61 45.9
Cpa.g.sc14.138 Carica papaya HOM05D006539 ORTHO05D008694 1.4e-06 58.2 152 32.2
AagrBONN_evm.TU.Sc2ySwM_117.170 Anthoceros agrestis HOM05D006539 ORTHO05D008694 1.9e-06 57.8 147 27.9
CANSAT64G0188 Cannabis sativa HOM05D006539 ORTHO05D008694 2.4e-06 57.4 152 30.9
Zm00001eb371210 Zea mays HOM05D005801 ORTHO05D008555 2.4e-06 57.4 182 31.3
HanXRQChr09g0264131 Helianthus annuus HOM05D006539 ORTHO05D008694 7.1e-06 55.8 148 29.1
Lju41A8T108 Lonicera japonica HOM05D006539 ORTHO05D008694 7.1e-06 55.8 153 31.4
Thhalv10013964m.g Eutrema salsugineum HOM05D006539 ORTHO05D008694 9.3e-06 55.5 151 31.8
Sabra04G0067100 Salix brachista HOM05D006539 ORTHO05D008694 9.3e-06 55.5 154 30.5


User provided reference genes

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