Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g066600 Medicago truncatula HOM05D002388 ORTHO05D008833 4.2e-37 157.5 81 100.0
Glyma.10G041600 Glycine max HOM05D002388 ORTHO05D008833 7.2e-37 156.8 81 98.8
Glyma.13G128600 Glycine max HOM05D002388 ORTHO05D008833 3.6e-36 154.5 81 96.3
Medtr2g014320 Medicago truncatula HOM05D002388 ORTHO05D008833 6.1e-36 153.7 78 100.0
TPR.G3364 Trifolium pratense HOM05D002388 ORTHO05D008833 5.2e-35 150.6 81 95.1
Psat4g122960 Pisum sativum HOM05D002388 ORTHO05D008833 1.2e-34 149.4 81 95.1
arahy.Tifrunner.gnm1.ann1.Y11EX9 Arachis hypogaea HOM05D002388 ORTHO05D008833 4.4e-34 147.5 81 91.4
TAR375G0363 Trochodendron aralioides HOM05D002388 ORTHO05D008833 9.8e-34 146.4 81 87.7
QL12p001301 Quercus lobata HOM05D002388 ORTHO05D008833 2.8e-33 144.8 80 88.8
Thecc.03G308600 Theobroma cacao HOM05D002388 ORTHO05D008833 2.8e-33 144.8 81 88.9
Lj1g0006191 Lotus japonicus HOM05D002388 ORTHO05D008833 3.7e-33 144.4 81 91.4
Dinv28991 Davidia involucrata HOM05D002388 ORTHO05D008833 8.3e-33 143.3 81 88.9
CiPaw.11G097500 Carya illinoinensis HOM05D002388 ORTHO05D008833 1.1e-32 142.9 81 86.4
Sabra01G0106900 Salix brachista HOM05D002388 ORTHO05D008833 1.1e-32 142.9 81 86.4
Duzib068G0043 Durio zibethinus HOM05D002388 ORTHO05D008833 1.4e-32 142.5 81 88.9
MD06G1025500 Malus domestica HOM05D002388 ORTHO05D008833 1.4e-32 142.5 81 86.4
SalBow6G3465 Salvia bowleyana HOM05D002388 ORTHO05D008833 1.4e-32 142.5 81 91.4
TAR119G0002 Trochodendron aralioides HOM05D002388 ORTHO05D008833 1.8e-32 142.1 81 85.2
Haze_08171 Corylus avellana HOM05D002388 ORTHO05D008833 3.1e-32 141.4 81 87.7
DCAR_004281 Daucus carota HOM05D002388 ORTHO05D008833 4.1e-32 141.0 81 90.1
Hma1.2p1_0870F.1_g230830 Hydrangea macrophylla HOM05D002388 ORTHO05D008833 4.1e-32 141.0 80 90.0
Prupe.5G029600 Prunus persica HOM05D002388 ORTHO05D008833 4.1e-32 141.0 81 85.2
TWI60G0513 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 4.1e-32 141.0 81 85.2
TWI81G0136 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 4.1e-32 141.0 81 84.0
Gohir.D08G175050 Gossypium hirsutum HOM05D002388 ORTHO05D008833 5.4e-32 140.6 81 87.7
Gorai.004G182800 Gossypium raimondii HOM05D002388 ORTHO05D008833 5.4e-32 140.6 81 87.7
MD16G1280900 Malus domestica HOM05D002388 ORTHO05D008833 5.4e-32 140.6 81 84.0
CSS0033524 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 7.0e-32 140.2 81 85.2
Ciclev10003014m.g Citrus clementina HOM05D002388 ORTHO05D008833 7.0e-32 140.2 81 86.4
Nn3g19407 Nelumbo nucifera HOM05D002388 ORTHO05D008833 7.0e-32 140.2 81 86.4
Phvul.003G283500 Phaseolus vulgaris HOM05D002388 ORTHO05D008833 7.0e-32 140.2 81 86.4
Potri.001G138100 Populus trichocarpa HOM05D002388 ORTHO05D008833 7.0e-32 140.2 81 84.0
THA.LOC104804589 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 7.0e-32 140.2 81 88.9
CSS0026703 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 9.2e-32 139.8 81 85.2
Eucgr.D02219 Eucalyptus grandis HOM05D002388 ORTHO05D008833 1.6e-31 139.0 81 85.2
vmacro14193 Vaccinium macrocarpon HOM05D002388 ORTHO05D008833 1.6e-31 139.0 81 85.2
Actinidia14785 Actinidia chinensis HOM05D002388 ORTHO05D008833 2.0e-31 138.7 81 86.4
CiPaw.12G067300 Carya illinoinensis HOM05D002388 ORTHO05D008833 2.0e-31 138.7 81 84.0
PGR031G2620 Punica granatum HOM05D002388 ORTHO05D008833 2.0e-31 138.7 79 87.3
COL.COLO4_16958 Corchorus olitorius HOM05D002388 ORTHO05D008833 5.9e-31 137.1 81 86.4
Duzib205G0142 Durio zibethinus HOM05D002388 ORTHO05D008833 5.9e-31 137.1 81 85.2
Lalb_Chr05g0225791 Lupinus albus HOM05D002388 ORTHO05D008833 5.9e-31 137.1 81 88.9
Nitab4.5_0000556g0150 Nicotiana tabacum HOM05D002388 ORTHO05D008833 5.9e-31 137.1 81 86.4
GSVIVG01013070001 Vitis vinifera HOM05D002388 ORTHO05D008833 5.9e-31 137.1 78 84.6
Nitab4.5_0002778g0070 Nicotiana tabacum HOM05D002388 ORTHO05D008833 1.0e-30 136.3 80 87.5
Cc08_g03400 Coffea canephora HOM05D002388 ORTHO05D008833 1.3e-30 136.0 81 84.0
PSO384G4479 Papaver somniferum HOM05D002388 ORTHO05D008833 1.3e-30 136.0 81 85.2
Peaxi162Scf00045g00216 Petunia axillaris HOM05D002388 ORTHO05D008833 1.7e-30 135.6 81 85.2
FAN18G1485 Fragaria x ananassa HOM05D002388 ORTHO05D008833 2.9e-30 134.8 81 82.7
HanXRQChr17g0538091 Helianthus annuus HOM05D002388 ORTHO05D008833 2.9e-30 134.8 81 81.5
Manes.04G058600 Manihot esculenta HOM05D002388 ORTHO05D008833 2.9e-30 134.8 79 84.8
PSO339G0280 Papaver somniferum HOM05D002388 ORTHO05D008833 3.8e-30 134.4 81 84.0
Solyc08g005210.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 3.8e-30 134.4 81 85.2
Sopen08g001240 Solanum pennellii HOM05D002388 ORTHO05D008833 3.8e-30 134.4 81 85.2
FAN04G1000 Fragaria x ananassa HOM05D002388 ORTHO05D008833 5.0e-30 134.0 81 80.2
RcHm_v2.0_Chr7g0211611 Rosa chinensis HOM05D002388 ORTHO05D008833 5.0e-30 134.0 81 81.5
SGA_v2.0_scaffold20G09240 Striga asiatica HOM05D002388 ORTHO05D008833 5.0e-30 134.0 80 83.8
AL2G34200 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 8.6e-30 133.3 81 82.7
AT1G74340 Arabidopsis thaliana HOM05D002388 ORTHO05D008833 8.6e-30 133.3 81 82.7
EL10Ac5g12027 Beta vulgaris HOM05D002388 ORTHO05D008833 8.6e-30 133.3 81 81.5
MELO3C013830.2 Cucumis melo HOM05D002388 ORTHO05D008833 8.6e-30 133.3 81 84.0
FAN08G0310 Fragaria x ananassa HOM05D002388 ORTHO05D008833 8.6e-30 133.3 81 80.2
Sp5g29500 Schrenkiella parvula HOM05D002388 ORTHO05D008833 8.6e-30 133.3 81 84.0
Aa31LG4G4590 Aethionema arabicum HOM05D002388 ORTHO05D008833 1.1e-29 132.9 81 84.0
A02p19260 Brassica napus HOM05D002388 ORTHO05D008833 1.1e-29 132.9 81 84.0
BolC2t09212H Brassica oleracea HOM05D002388 ORTHO05D008833 1.1e-29 132.9 81 84.0
BraA07t31559Z Brassica rapa HOM05D002388 ORTHO05D008833 1.1e-29 132.9 81 84.0
CsaV3_3G001440 Cucumis sativus L. HOM05D002388 ORTHO05D008833 1.1e-29 132.9 81 82.7
Migut.A01083 Erythranthe guttata HOM05D002388 ORTHO05D008833 1.1e-29 132.9 81 82.7
Thhalv10019650m.g Eutrema salsugineum HOM05D002388 ORTHO05D008833 1.1e-29 132.9 81 84.0
Sed0013912 Sechium edule HOM05D002388 ORTHO05D008833 1.1e-29 132.9 81 82.7
BraA02t06971Z Brassica rapa HOM05D002388 ORTHO05D008833 1.5e-29 132.5 81 84.0
CSS0009097 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 1.5e-29 132.5 80 82.5
Carub.0002s2112 Capsella rubella HOM05D002388 ORTHO05D008833 1.5e-29 132.5 81 82.7
CAN.G474.16 Capsicum annuum HOM05D002388 ORTHO05D008833 1.5e-29 132.5 81 82.7
CAN.G137.4 Capsicum annuum HOM05D002388 ORTHO05D008833 1.9e-29 132.1 81 82.7
CARHR067600 Cardamine hirsuta HOM05D002388 ORTHO05D008833 1.9e-29 132.1 81 84.0
Peaxi162Scf00185g00821 Petunia axillaris HOM05D002388 ORTHO05D008833 1.9e-29 132.1 81 84.0
AUR62018655 Chenopodium quinoa HOM05D002388 ORTHO05D008833 2.5e-29 131.7 81 82.7
Peaxi162Scf00038g00010 Petunia axillaris HOM05D002388 ORTHO05D008833 3.3e-29 131.3 79 83.5
Ah.12g055420 Amaranthus hybridus HOM05D002388 ORTHO05D008833 5.6e-29 130.6 81 80.2
CSS0006499 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 5.6e-29 130.6 80 82.5
AUR62007344 Chenopodium quinoa HOM05D002388 ORTHO05D008833 5.6e-29 130.6 81 82.7
ECA246G0855 Erigeron canadensis HOM05D002388 ORTHO05D008833 5.6e-29 130.6 81 80.2
unitig_32.g10897 Utricularia gibba HOM05D002388 ORTHO05D008833 5.6e-29 130.6 81 80.2
BcaC08g46864 Brassica carinata HOM05D002388 ORTHO05D008833 7.3e-29 130.2 81 82.7
BolC6t39879H Brassica oleracea HOM05D002388 ORTHO05D008833 7.3e-29 130.2 81 82.7
Nitab4.5_0001632g0030 Nicotiana tabacum HOM05D002388 ORTHO05D008833 7.3e-29 130.2 81 82.7
Cpa.g.sc13.304 Carica papaya HOM05D002388 ORTHO05D008833 9.5e-29 129.8 81 81.5
Sopen06g021590 Solanum pennellii HOM05D002388 ORTHO05D008833 1.2e-28 129.4 81 81.5
Nitab4.5_0000109g0080 Nicotiana tabacum HOM05D002388 ORTHO05D008833 2.1e-28 128.6 81 81.5
CANSAT21G0073 Cannabis sativa HOM05D002388 ORTHO05D008833 2.8e-28 128.3 81 81.5
CDE05G0657 Ceratophyllum demersum HOM05D002388 ORTHO05D008833 3.6e-28 127.9 80 77.5
PGSC0003DMG400016784 Solanum tuberosum HOM05D002388 ORTHO05D008833 3.6e-28 127.9 81 80.2
Lsat_1_v5_gn_3_19620 Lactuca sativa HOM05D002388 ORTHO05D008833 4.7e-28 127.5 83 77.1
Solyc06g066400.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 1.4e-27 125.9 81 79.0
PGSC0003DMG400003487 Solanum tuberosum HOM05D002388 ORTHO05D008833 3.0e-27 124.8 81 80.2
Os11g0311550 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 1.2e-26 122.9 79 75.9
ATR0564G363 Amborella trichopoda HOM05D002388 ORTHO05D008833 5.7e-26 120.6 81 72.8
THA.LOC104808763 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 4.9e-25 117.5 76 77.6
SEGI_36022 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 5.0e-22 107.5 81 63.0
Nn1g00187 Nelumbo nucifera HOM05D002388 ORTHO05D008833 1.5e-21 105.9 57 91.2
Mapoly0067s0029 Marchantia polymorpha HOM05D002388 ORTHO05D008833 2.8e-20 101.7 80 61.2
PGSC0003DMG400043827 Solanum tuberosum HOM05D002388 ORTHO05D008833 2.8e-20 101.7 81 69.1
Pp3c22_2990 Physcomitrium patens HOM05D002388 ORTHO05D008833 2.6e-18 95.1 80 58.8
AagrBONN_evm.TU.Sc2ySwM_228.4391 Anthoceros agrestis HOM05D003123 ORTHO05D003492 4.4e-18 94.4 76 56.6
arahy.Tifrunner.gnm1.ann1.G961TR Arachis hypogaea HOM05D002388 ORTHO05D008833 4.4e-18 94.4 82 64.6
CSS0023919 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 4.9e-17 90.9 78 67.9
Hund14364 Selenicereus undatus HOM05D002388 ORTHO05D008833 1.4e-16 89.4 51 86.3
PGSC0003DMG400016734 Solanum tuberosum HOM05D002388 ORTHO05D008833 7.8e-15 83.6 55 80.0
ClCG10G001370 Citrullus lanatus HOM05D002388 ORTHO05D008833 1.0e-14 83.2 53 77.4
SEGI_14802 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 1.0e-14 83.2 64 62.5
BcaB05g24849 Brassica carinata HOM05D002388 ORTHO05D008833 3.0e-14 81.6 50 78.0
Os02g0140101 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 3.9e-14 81.3 49 79.6
Peaxi162Scf00218g02111 Petunia axillaris HOM05D004298 ORTHO05D008833 1.9e-08 62.4 39 71.8
MCO11G506 Micromonas commoda HOM05D002388 ORTHO05D008833 1.2e-07 59.7 68 38.2


User provided reference genes

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