Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g066350 Medicago truncatula HOM05D015175 ORTHO05D007522 2.2e-88 328.9 171 100.0
Medtr2g101460 Medicago truncatula HOM05D008512 ORTHO05D007522 4.5e-20 102.1 129 38.0
TPR.G36052 Trifolium pratense HOM05D000045 ORTHO05D007522 1.0e-16 90.9 134 35.1
TPR.G9165 Trifolium pratense HOM05D000045 ORTHO05D007522 3.0e-16 89.4 97 46.4
TPR.G40266 Trifolium pratense HOM05D000045 ORTHO05D007522 4.3e-15 85.5 145 37.9
TPR.G29715 Trifolium pratense HOM05D000045 ORTHO05D007522 7.4e-15 84.7 129 34.1
TPR.G37658 Trifolium pratense HOM05D000045 ORTHO05D000067 9.6e-15 84.3 127 30.7
Lj4g0016999 Lotus japonicus HOM05D000045 ORTHO05D007522 1.3e-14 84.0 126 33.3
Lj1g0023623 Lotus japonicus HOM05D000045 ORTHO05D007522 6.2e-14 81.6 128 32.8
Medtr6g022080 Medicago truncatula HOM05D015175 ORTHO05D007522 2.4e-13 79.7 148 28.4
arahy.Tifrunner.gnm1.ann1.8SNE72 Arachis hypogaea HOM05D000045 ORTHO05D007522 2.0e-12 76.6 129 32.6
Glyma.18G179400 Glycine max HOM05D000045 ORTHO05D000067 2.0e-12 76.6 125 31.2
Lj6g0007124 Lotus japonicus HOM05D000045 ORTHO05D000067 3.4e-12 75.9 126 29.4
Lj1g0021005 Lotus japonicus HOM05D000045 ORTHO05D007522 1.0e-11 74.3 129 28.7
arahy.Tifrunner.gnm1.ann1.Z72PVB Arachis hypogaea HOM05D008512 ORTHO05D007522 1.3e-11 73.9 142 31.7
Lj2g0009580 Lotus japonicus HOM05D000045 ORTHO05D007522 1.3e-11 73.9 129 28.7
LjContig00413g0001833 Lotus japonicus HOM05D014238 ORTHO05D015703 1.3e-11 73.9 168 29.2
TPR.G21949 Trifolium pratense HOM05D008512 ORTHO05D007522 1.3e-11 73.9 129 27.9
Medtr1g070355 Medicago truncatula HOM05D000045 ORTHO05D007522 1.7e-11 73.6 186 29.0
arahy.Tifrunner.gnm1.ann1.QD7BCG Arachis hypogaea HOM05D008512 ORTHO05D007522 2.2e-11 73.2 160 28.8
Lj1g0017039 Lotus japonicus HOM05D000045 ORTHO05D007522 6.5e-11 71.6 125 30.4
Lj6g0023979 Lotus japonicus HOM05D058933 ORTHO05D007522 2.5e-10 69.7 123 33.3
Lj1g0004807 Lotus japonicus HOM05D000045 ORTHO05D000067 7.1e-10 68.2 159 30.2
Medtr3g448650 Medicago truncatula HOM05D008512 ORTHO05D007522 7.1e-10 68.2 95 36.8
TPR.G39767 Trifolium pratense HOM05D000045 ORTHO05D007522 9.3e-10 67.8 145 29.0
Lj2g0009070 Lotus japonicus HOM05D000045 ORTHO05D000067 1.2e-09 67.4 140 27.9
TPR.G600 Trifolium pratense HOM05D000045 ORTHO05D007522 1.2e-09 67.4 141 27.0
arahy.Tifrunner.gnm1.ann1.UCM082 Arachis hypogaea HOM05D008512 ORTHO05D007522 1.6e-09 67.0 138 28.3
TPR.G2699 Trifolium pratense HOM05D000045 ORTHO05D000067 6.1e-09 65.1 176 28.4
Lj4g0021877 Lotus japonicus HOM05D000045 ORTHO05D000067 7.9e-09 64.7 126 31.7
TPR.G9983 Trifolium pratense HOM05D000045 ORTHO05D007522 7.9e-09 64.7 199 29.6
arahy.Tifrunner.gnm1.ann1.N9AV22 Arachis hypogaea HOM05D010283 ORTHO05D013006 1.0e-08 64.3 135 27.4
Glyma.10G121700 Glycine max HOM05D000045 ORTHO05D000067 1.0e-08 64.3 127 31.5
arahy.Tifrunner.gnm1.ann1.8433TV Arachis hypogaea HOM05D010283 ORTHO05D013006 1.8e-08 63.5 172 26.2
Medtr5g076070 Medicago truncatula HOM05D000045 ORTHO05D007522 1.8e-08 63.5 98 32.7
arahy.Tifrunner.gnm1.ann1.E92V9Y Arachis hypogaea HOM05D000045 ORTHO05D013006 3.9e-08 62.4 171 24.6
Medtr1g052260 Medicago truncatula HOM05D008512 ORTHO05D007522 8.7e-08 61.2 59 47.5
Glyma.01G202900 Glycine max HOM05D000045 ORTHO05D000067 1.1e-07 60.8 107 33.6
Medtr4g050510 Medicago truncatula HOM05D000045 ORTHO05D007522 1.9e-07 60.1 110 30.0
arahy.Tifrunner.gnm1.ann1.MU2UU0 Arachis hypogaea HOM05D010283 ORTHO05D013006 3.3e-07 59.3 172 26.2
Medtr2g069720 Medicago truncatula HOM05D015175 ORTHO05D007522 3.3e-07 59.3 74 40.5
TPR.G17630 Trifolium pratense HOM05D000045 ORTHO05D000067 3.3e-07 59.3 107 33.6
Glyma.06G229800 Glycine max HOM05D000045 ORTHO05D007522 4.3e-07 58.9 118 30.5
Lj3g0025415 Lotus japonicus HOM05D000045 ORTHO05D007522 1.3e-06 57.4 195 24.6
Lj6g0017880 Lotus japonicus HOM05D000045 ORTHO05D007522 1.3e-06 57.4 93 34.4
LjContig00302g0011664 Lotus japonicus HOM05D000045 ORTHO05D007522 1.3e-06 57.4 195 24.6
arahy.Tifrunner.gnm1.ann1.9K8J5U Arachis hypogaea HOM05D008512 ORTHO05D007522 6.3e-06 55.1 168 26.8
Lj1g0014168 Lotus japonicus HOM05D004644 ORTHO05D007522 6.3e-06 55.1 101 30.7


User provided reference genes

Program Settings