Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g066150 Medicago truncatula HOM05D004085 ORTHO05D263454 2.1e-41 171.8 77 100.0
Ca_22870_v3 Cicer arietinum L. HOM05D004085 ORTHO05D005189 1.5e-12 75.9 83 47.0
Medtr8g066120 Medicago truncatula HOM05D004085 ORTHO05D005189 2.0e-12 75.5 81 46.9
Psat4g122760 Pisum sativum HOM05D004085 ORTHO05D005189 5.9e-12 73.9 81 46.9
Psat4g118760 Pisum sativum HOM05D004085 ORTHO05D005189 2.2e-11 72.0 81 45.7
CANSAT64G3016 Cannabis sativa HOM05D004085 ORTHO05D005189 4.2e-10 67.8 84 44.0
Lj4g0023791 Lotus japonicus HOM05D004085 ORTHO05D005189 2.1e-09 65.5 84 44.0
Phvul.003G280600 Phaseolus vulgaris HOM05D004085 ORTHO05D005189 2.1e-09 65.5 84 42.9
Glyma.05G183800 Glycine max HOM05D004085 ORTHO05D005189 2.7e-09 65.1 84 42.9
SGA_v2.0_scaffold36G14490 Striga asiatica HOM05D004085 ORTHO05D005189 2.7e-09 65.1 71 53.5
arahy.Tifrunner.gnm1.ann1.34XV9Z Arachis hypogaea HOM05D004085 ORTHO05D005189 1.0e-08 63.2 84 40.5
Lalb_Chr15g0084991 Lupinus albus HOM05D004085 ORTHO05D005189 1.8e-08 62.4 84 41.7
Gohir.A11G034100 Gossypium hirsutum HOM05D004085 ORTHO05D005189 2.3e-08 62.0 56 55.4
Nn4g23533 Nelumbo nucifera HOM05D004085 ORTHO05D005189 3.0e-08 61.6 96 42.7
Lalb_Chr20g0117031 Lupinus albus HOM05D004085 ORTHO05D005189 3.9e-08 61.2 84 40.5
MELO3C011402.2 Cucumis melo HOM05D004085 ORTHO05D005189 8.8e-08 60.1 84 40.5
Actinidia07768 Actinidia chinensis HOM05D004085 ORTHO05D005189 2.0e-07 58.9 96 38.5
Solyc06g069390.4 Solanum lycopersicum HOM05D004085 ORTHO05D005189 2.0e-07 58.9 80 41.2
CsaV3_6G033900 Cucumis sativus L. HOM05D004085 ORTHO05D005189 2.6e-07 58.5 82 41.5
PGSC0003DMG402004079 Solanum tuberosum HOM05D004085 ORTHO05D005189 2.6e-07 58.5 80 41.2
CAN.G587.59 Capsicum annuum HOM05D004085 ORTHO05D005189 3.3e-07 58.2 80 41.2
CiPaw.05G122000 Carya illinoinensis HOM05D004085 ORTHO05D005189 4.4e-07 57.8 81 42.0
MD13G1056600 Malus domestica HOM05D004085 ORTHO05D005189 4.4e-07 57.8 84 44.0
Sopen06g026660 Solanum pennellii HOM05D004085 ORTHO05D005189 4.4e-07 57.8 80 40.0
TPR.G3316 Trifolium pratense HOM05D004085 ORTHO05D026373 5.7e-07 57.4 33 69.7
vmacro10475 Vaccinium macrocarpon HOM05D004085 ORTHO05D005189 5.7e-07 57.4 81 43.2
Migut.D01616 Erythranthe guttata HOM05D004085 ORTHO05D005189 7.4e-07 57.0 81 42.0
Lj5A720T31 Lonicera japonica HOM05D004085 ORTHO05D026373 7.4e-07 57.0 55 50.9
MBI14_g08107_MAGBIO Magnolia biondii HOM05D004085 ORTHO05D005189 7.4e-07 57.0 96 38.5
Nitab4.5_0002863g0020 Nicotiana tabacum HOM05D004085 ORTHO05D005189 9.7e-07 56.6 80 40.0
PSO409G0049 Papaver somniferum HOM05D004085 ORTHO05D005189 9.7e-07 56.6 85 41.2
RcHm_v2.0_Chr4g0437351 Rosa chinensis HOM05D004085 ORTHO05D005189 9.7e-07 56.6 81 44.4
VMungo0251G3520 Vigna mungo HOM05D004085 ORTHO05D005189 9.7e-07 56.6 106 33.0
FAN22G1834 Fragaria x ananassa HOM05D004085 ORTHO05D005189 1.3e-06 56.2 83 42.2
Prupe.1G293400 Prunus persica HOM05D004085 ORTHO05D005189 1.3e-06 56.2 81 43.2
PGSC0003DMG400001937 Solanum tuberosum HOM05D004085 ORTHO05D005189 1.3e-06 56.2 83 41.0
Atru.chr11.1559 Acer truncatum HOM05D004085 ORTHO05D005189 1.7e-06 55.8 81 43.2
CSS0016924 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 1.7e-06 55.8 80 42.5
Eucgr.J01102 Eucalyptus grandis HOM05D004085 ORTHO05D005189 1.7e-06 55.8 83 42.2
Gohir.A03G106500 Gossypium hirsutum HOM05D004085 ORTHO05D005189 1.7e-06 55.8 81 43.2
Gorai.005G147600 Gossypium raimondii HOM05D004085 ORTHO05D005189 1.7e-06 55.8 81 43.2
PSO063G3410 Papaver somniferum HOM05D004085 ORTHO05D005189 1.7e-06 55.8 85 40.0
FAN12G2772 Fragaria x ananassa HOM05D004085 ORTHO05D005189 2.2e-06 55.5 83 42.2
MD16G1055900 Malus domestica HOM05D004085 ORTHO05D005189 2.2e-06 55.5 84 42.9
Solyc04g005300.4 Solanum lycopersicum HOM05D004085 ORTHO05D005189 2.2e-06 55.5 81 42.0
Sopen04g001280 Solanum pennellii HOM05D004085 ORTHO05D005189 2.2e-06 55.5 81 42.0
TWI75G0426 Tripterygium wilfordii HOM05D004085 ORTHO05D005189 2.2e-06 55.5 82 42.7
Duzib251G0046 Durio zibethinus HOM05D004085 ORTHO05D005189 2.8e-06 55.1 97 36.1
Aqoxy3G03746 Aquilegia oxysepala HOM05D004085 ORTHO05D005189 3.7e-06 54.7 81 39.5
PGR044G1995 Punica granatum HOM05D004085 ORTHO05D005189 3.7e-06 54.7 83 39.8
ClCG08G010600 Citrullus lanatus HOM05D004085 ORTHO05D005189 4.8e-06 54.3 82 40.2
Dinv07974 Davidia involucrata HOM05D004085 ORTHO05D005189 4.8e-06 54.3 83 41.0
Ah.03g138610 Amaranthus hybridus HOM05D004085 ORTHO05D005189 6.3e-06 53.9 97 36.1
Cc11_g11560 Coffea canephora HOM05D004085 ORTHO05D005189 6.3e-06 53.9 81 39.5
Hma1.2p1_0595F.1_g186285 Hydrangea macrophylla HOM05D004085 ORTHO05D005189 6.3e-06 53.9 77 39.0
Manes.05G115200 Manihot esculenta HOM05D004085 ORTHO05D005189 6.3e-06 53.9 81 39.5
DCAR_007209 Daucus carota HOM05D004085 ORTHO05D005189 8.2e-06 53.5 94 37.2
MD16G1055500 Malus domestica HOM05D004085 ORTHO05D005189 8.2e-06 53.5 95 40.0


User provided reference genes

Program Settings