Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g061350 Medicago truncatula HOM05D006014 ORTHO05D007608 5.8e-84 314.3 174 100.0
Ca_23028_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 5.0e-67 258.1 175 85.7
Ca_23030_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 5.0e-67 258.1 175 85.7
Psat4g136440 Pisum sativum HOM05D006014 ORTHO05D007608 2.5e-66 255.8 177 83.1
TPR.G28172 Trifolium pratense HOM05D006014 ORTHO05D007608 3.6e-65 251.9 179 83.8
Glyma.06G236200 Glycine max HOM05D006014 ORTHO05D007608 1.2e-60 236.9 179 76.5
Glyma.12G162300 Glycine max HOM05D006014 ORTHO05D007608 4.2e-58 228.4 180 75.0
VMungo1127G0848 Vigna mungo HOM05D006014 ORTHO05D007608 1.7e-54 216.5 177 71.2
Lj3g0022855 Lotus japonicus HOM05D006014 ORTHO05D007608 6.3e-54 214.5 179 70.4
Phvul.011G162800 Phaseolus vulgaris HOM05D006014 ORTHO05D007608 4.1e-53 211.8 175 72.6
Lalb_Chr07g0182891 Lupinus albus HOM05D006014 ORTHO05D007608 7.7e-52 207.6 181 67.4
QL08p024005 Quercus lobata HOM05D006014 ORTHO05D007608 6.1e-49 198.0 175 65.7
CANSAT35G1465 Cannabis sativa HOM05D006014 ORTHO05D007608 2.6e-47 192.6 177 63.8
Manes.15G089600 Manihot esculenta HOM05D006014 ORTHO05D007608 5.7e-47 191.4 181 64.1
Thecc.07G096300 Theobroma cacao HOM05D006014 ORTHO05D007608 1.3e-46 190.3 181 62.4
TAR626G1430 Trochodendron aralioides HOM05D006014 ORTHO05D007608 4.8e-46 188.3 181 65.2
Migut.H01957 Erythranthe guttata HOM05D006014 ORTHO05D007608 1.4e-45 186.8 171 65.5
GSVIVG01014290001 Vitis vinifera HOM05D006014 ORTHO05D007608 1.4e-45 186.8 176 64.2
arahy.Tifrunner.gnm1.ann1.FY4UJ9 Arachis hypogaea HOM05D006014 ORTHO05D007608 2.4e-45 186.0 216 55.6
COL.COLO4_03477 Corchorus olitorius HOM05D006014 ORTHO05D007608 2.4e-45 186.0 185 60.5
Potri.001G396600 Populus trichocarpa HOM05D006014 ORTHO05D007608 2.4e-45 186.0 171 63.2
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 4.1e-45 185.3 146 71.2
FAN21G0470 Fragaria x ananassa HOM05D006014 ORTHO05D007608 7.0e-45 184.5 173 67.1
Sed0004006 Sechium edule HOM05D006014 ORTHO05D007608 7.0e-45 184.5 169 66.3
Gohir.A04G035600 Gossypium hirsutum HOM05D006014 ORTHO05D007608 9.1e-45 184.1 176 63.1
Gorai.009G375600 Gossypium raimondii HOM05D006014 ORTHO05D007608 9.1e-45 184.1 176 61.9
ClCG11G017820 Citrullus lanatus HOM05D006014 ORTHO05D007608 1.6e-44 183.3 186 61.8
FvH4_3g19430 Fragaria vesca HOM05D006014 ORTHO05D007608 1.6e-44 183.3 173 67.1
FAN11G2300 Fragaria x ananassa HOM05D006014 ORTHO05D007608 1.6e-44 183.3 173 67.1
TWI38G2086 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 1.6e-44 183.3 171 62.6
FAN25G0078 Fragaria x ananassa HOM05D006014 ORTHO05D007608 2.6e-44 182.6 173 66.5
Nitab4.5_0003033g0060 Nicotiana tabacum HOM05D006014 ORTHO05D007608 2.6e-44 182.6 176 63.6
Sabra16G0259700 Salix brachista HOM05D006014 ORTHO05D007608 2.6e-44 182.6 172 61.6
Gohir.D05G347800 Gossypium hirsutum HOM05D006014 ORTHO05D007608 3.5e-44 182.2 176 61.4
MD03G1232600 Malus domestica HOM05D006014 ORTHO05D007608 5.9e-44 181.4 179 60.9
Peaxi162Scf00069g01737 Petunia axillaris HOM05D006014 ORTHO05D007608 1.3e-43 180.3 174 62.6
RcHm_v2.0_Chr5g0032711 Rosa chinensis HOM05D006014 ORTHO05D007608 1.3e-43 180.3 172 66.3
CSS0037767 Camellia sinensis var. sinensis HOM05D006014 ORTHO05D007608 2.2e-43 179.5 169 63.3
Solyc07g062870.3 Solanum lycopersicum HOM05D006014 ORTHO05D007608 2.2e-43 179.5 174 62.6
Sopen07g031070 Solanum pennellii HOM05D006014 ORTHO05D007608 2.2e-43 179.5 174 62.6
Lsat_1_v5_gn_5_128220 Lactuca sativa HOM05D006014 ORTHO05D007608 2.9e-43 179.1 181 58.6
CiPaw.11G167800 Carya illinoinensis HOM05D006014 ORTHO05D007608 5.0e-43 178.3 144 70.1
Prupe.4G176000 Prunus persica HOM05D006014 ORTHO05D007608 5.0e-43 178.3 191 60.7
MD11G1253300 Malus domestica HOM05D006014 ORTHO05D007608 6.5e-43 177.9 181 59.7
Nn1g04203 Nelumbo nucifera HOM05D006014 ORTHO05D007608 8.5e-43 177.6 170 61.8
Eucgr.F01167 Eucalyptus grandis HOM05D006014 ORTHO05D007608 1.1e-42 177.2 182 61.0
MSTRG.12894 Avicennia marina HOM05D006014 ORTHO05D007608 1.5e-42 176.8 174 62.6
Ciclev10009636m.g Citrus clementina HOM05D006014 ORTHO05D007608 1.5e-42 176.8 178 59.0
CsaV3_4G033460 Cucumis sativus L. HOM05D006014 ORTHO05D007608 1.9e-42 176.4 186 60.2
Dinv14938 Davidia involucrata HOM05D006014 ORTHO05D007608 2.5e-42 176.0 183 60.7
Ah.06g184580 Amaranthus hybridus HOM05D006014 ORTHO05D007608 3.2e-42 175.6 174 61.5
CARHR090180 Cardamine hirsuta HOM05D006014 ORTHO05D007608 3.2e-42 175.6 179 60.9
PGSC0003DMG400012405 Solanum tuberosum HOM05D006014 ORTHO05D007608 3.2e-42 175.6 173 63.0
Duzib170G0605 Durio zibethinus HOM05D006014 ORTHO05D007608 4.2e-42 175.3 186 57.5
TAR624G0768 Trochodendron aralioides HOM05D006014 ORTHO05D007608 4.2e-42 175.3 160 64.4
MELO3C025609.2 Cucumis melo HOM05D006014 ORTHO05D007608 5.5e-42 174.9 186 59.7
Nitab4.5_0013317g0010 Nicotiana tabacum HOM05D006014 ORTHO05D007608 5.5e-42 174.9 179 60.9
EL10Ac4g08237 Beta vulgaris HOM05D006014 ORTHO05D007608 9.4e-42 174.1 176 61.9
A03p39200 Brassica napus HOM05D006014 ORTHO05D007608 1.2e-41 173.7 183 57.9
DCAR_019570 Daucus carota HOM05D006014 ORTHO05D007608 1.2e-41 173.7 181 58.0
Hma1.2p1_1411F.1_g281760 Hydrangea macrophylla HOM05D006014 ORTHO05D007608 1.2e-41 173.7 173 59.5
Cc05_g11740 Coffea canephora HOM05D006014 ORTHO05D007608 1.6e-41 173.3 167 62.3
CDE10G0058 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 3.6e-41 172.2 173 60.1
BraA03t13069Z Brassica rapa HOM05D006014 ORTHO05D007608 4.7e-41 171.8 178 59.0
SalBow8G3070 Salvia bowleyana HOM05D006014 ORTHO05D007608 4.7e-41 171.8 178 57.9
Sc03g0010200 Simmondsia chinensis HOM05D006014 ORTHO05D007608 4.7e-41 171.8 179 62.0
AT3G15190 Arabidopsis thaliana HOM05D006014 ORTHO05D007608 1.0e-40 170.6 169 60.9
AUR62036161 Chenopodium quinoa HOM05D006014 ORTHO05D007608 1.8e-40 169.9 174 59.8
HanXRQChr10g0302621 Helianthus annuus HOM05D006014 ORTHO05D007608 1.8e-40 169.9 177 57.1
CDE10G1292 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 3.0e-40 169.1 167 61.7
C01p49380 Brassica napus HOM05D006014 ORTHO05D007608 4.0e-40 168.7 182 58.8
Sp3g13400 Schrenkiella parvula HOM05D006014 ORTHO05D007608 4.0e-40 168.7 186 57.5
BcaB04g20944 Brassica carinata HOM05D006014 ORTHO05D007608 5.2e-40 168.3 173 59.5
BolC1t04895H Brassica oleracea HOM05D006014 ORTHO05D007608 5.2e-40 168.3 182 58.8
PGR083G0398 Punica granatum HOM05D006014 ORTHO05D007608 6.7e-40 167.9 179 60.9
AUR62019472 Chenopodium quinoa HOM05D006014 ORTHO05D007608 8.8e-40 167.5 174 59.2
AL3G27580 Arabidopsis lyrata HOM05D006014 ORTHO05D007608 1.2e-39 167.2 183 57.4
BcaB06g29543 Brassica carinata HOM05D006014 ORTHO05D007608 2.0e-39 166.4 147 65.3
Cfa020606 Carpinus fangiana HOM05D006014 ORTHO05D007608 2.0e-39 166.4 123 73.2
arahy.Tifrunner.gnm1.ann1.QT5AN8 Arachis hypogaea HOM05D006014 ORTHO05D007608 2.6e-39 166.0 265 44.9
ECA234G0345 Erigeron canadensis HOM05D006014 ORTHO05D007608 2.6e-39 166.0 178 57.3
Thhalv10021521m.g Eutrema salsugineum HOM05D006014 ORTHO05D007608 2.6e-39 166.0 149 63.1
Aqoxy1G02326 Aquilegia oxysepala HOM05D006014 ORTHO05D007608 3.3e-39 165.6 189 54.5
THA.LOC104815561 Tarenaya hassleriana HOM05D006014 ORTHO05D007608 3.3e-39 165.6 178 57.3
A01p38830 Brassica napus HOM05D006014 ORTHO05D007608 4.4e-39 165.2 178 58.4
A05p34280 Brassica napus HOM05D006014 ORTHO05D007608 4.4e-39 165.2 185 57.3
C05p52040 Brassica napus HOM05D006014 ORTHO05D007608 4.4e-39 165.2 147 64.6
BraA01t03929Z Brassica rapa HOM05D006014 ORTHO05D007608 4.4e-39 165.2 178 58.4
BraA05t22249Z Brassica rapa HOM05D006014 ORTHO05D007608 4.4e-39 165.2 185 57.3
Carub.0003s1484 Capsella rubella HOM05D006014 ORTHO05D007608 4.4e-39 165.2 164 59.1
Aa31LG8G2390 Aethionema arabicum HOM05D006014 ORTHO05D007608 5.7e-39 164.9 186 53.8
Oeu051088.1 Olea europaea HOM05D006014 ORTHO05D007608 5.7e-39 164.9 170 61.2
PSO675G1148 Papaver somniferum HOM05D006014 ORTHO05D007608 9.7e-39 164.1 182 57.7
BcaC01g03887 Brassica carinata HOM05D006014 ORTHO05D007608 2.2e-38 162.9 120 72.5
PSO541G1420 Papaver somniferum HOM05D006014 ORTHO05D007608 3.7e-38 162.2 182 57.1
BolC3t17032H Brassica oleracea HOM05D006014 ORTHO05D007608 4.8e-38 161.8 120 71.7
C03p47570 Brassica napus HOM05D006014 ORTHO05D007608 6.3e-38 161.4 146 61.6
MBI07_g30170_MAGBIO Magnolia biondii HOM05D006014 ORTHO05D007608 4.1e-37 158.7 115 71.3
Oeu037371.1 Olea europaea HOM05D006014 ORTHO05D007608 7.0e-37 157.9 148 62.8
Hund04492 Selenicereus undatus HOM05D006014 ORTHO05D007608 2.7e-36 156.0 176 57.4
Nitab4.5_0002330g0100 Nicotiana tabacum HOM05D006014 ORTHO05D007608 4.5e-36 155.2 195 53.8
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 2.2e-35 152.9 152 61.8
TWI39G1175 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 3.8e-35 152.1 127 63.8
Sed0026173 Sechium edule HOM05D006014 ORTHO05D007608 5.0e-35 151.8 175 57.1
ATR0737G141 Amborella trichopoda HOM05D006014 ORTHO05D007608 1.5e-34 150.2 113 70.8
Nitab4.5_0000332g0180 Nicotiana tabacum HOM05D006014 ORTHO05D007608 1.9e-34 149.8 178 55.6
Actinidia35240 Actinidia chinensis HOM05D006014 ORTHO05D007608 3.2e-34 149.1 107 75.7
Lj3g0017472 Lotus japonicus HOM05D006014 ORTHO05D007608 3.6e-33 145.6 140 60.0
Mapoly0009s0159 Marchantia polymorpha HOM05D006014 ORTHO05D007608 7.5e-31 137.9 131 59.5
SEGI_01083 Sequoiadendron giganteum HOM05D006014 ORTHO05D007608 2.2e-30 136.3 170 53.5
Rhsim04G0022600 Rhododendron simsii HOM05D006014 ORTHO05D007608 3.7e-30 135.6 184 50.0
Zm00001eb360330 Zea mays HOM05D006014 ORTHO05D007608 2.3e-27 126.3 119 59.7
Os01g0678600 Oryza sativa ssp. japonica HOM05D006014 ORTHO05D007608 9.5e-26 120.9 188 44.7
Pp3c24_17080 Physcomitrium patens HOM05D006014 ORTHO05D007608 4.7e-25 118.6 126 55.6
vmacro09523 Vaccinium macrocarpon HOM05D006014 ORTHO05D007608 8.0e-25 117.9 83 71.1
Lj8A154T77 Lonicera japonica HOM05D006014 ORTHO05D007608 4.0e-24 115.5 71 77.5
AagrBONN_evm.TU.Sc2ySwM_344.3794 Anthoceros agrestis HOM05D006014 ORTHO05D007608 1.2e-23 114.0 152 48.7
Pp3c20_13390 Physcomitrium patens HOM05D006014 ORTHO05D007608 3.4e-23 112.5 126 50.8
CBR_g30802 Chara braunii HOM05D006014 ORTHO05D007608 1.1e-21 107.5 103 56.3
SGA_v2.0_scaffold70G23686 Striga asiatica HOM05D006014 ORTHO05D007608 1.5e-18 97.1 339 30.4
BcaC09g48477 Brassica carinata HOM05D006014 ORTHO05D007608 5.6e-18 95.1 141 50.4
Cre12.g494750 Chlamydomonas reinhardtii HOM05D006014 ORTHO05D007608 2.3e-16 89.7 121 46.3
CBR_g39307 Chara braunii HOM05D006014 ORTHO05D007608 3.4e-15 85.9 79 58.2
MCO10G118 Micromonas commoda HOM05D006014 ORTHO05D007608 8.6e-11 71.2 83 48.2
Gohir.A13G146850 Gossypium hirsutum HOM05D006014 ORTHO05D007608 1.1e-10 70.9 72 58.3
Dinv20203 Davidia involucrata HOM05D006014 ORTHO05D007608 9.5e-10 67.8 106 48.1
Cpa.g.sc131.85 Carica papaya HOM05D006014 ORTHO05D007608 1.4e-08 63.9 103 52.4
HPP92_010061 Vanilla planifolia HOM05D006014 ORTHO05D007608 3.4e-07 59.3 75 50.7


User provided reference genes

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