Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g059505 Medicago truncatula HOM05D016220 ORTHO05D018479 3.6e-73 278.1 135 100.0
BcaB04g17087 Brassica carinata HOM05D002453 ORTHO05D008746 2.4e-13 79.3 111 37.8
Psat4g140040 Pisum sativum HOM05D002453 ORTHO05D008746 1.8e-11 73.2 122 35.2
Sabra11G0096300 Salix brachista HOM05D000891 ORTHO05D008746 3.3e-10 68.9 108 35.2
Potri.011G108500 Populus trichocarpa HOM05D002453 ORTHO05D008746 4.3e-10 68.6 78 41.0
Ca_26205_v3 Cicer arietinum L. HOM05D002453 ORTHO05D008746 2.1e-09 66.2 118 32.2
CSS0006454 Camellia sinensis var. sinensis HOM05D006858 ORTHO05D008767 9.0e-08 60.8 107 30.8
CSS0049463 Camellia sinensis var. sinensis HOM05D006858 ORTHO05D008767 9.0e-08 60.8 107 30.8
ECA246G0598 Erigeron canadensis HOM05D007358 ORTHO05D009117 1.2e-07 60.5 105 31.4
Lj3P942T62 Lonicera japonica HOM05D007660 ORTHO05D009442 1.5e-07 60.1 120 27.5
Psat1g009200 Pisum sativum HOM05D007085 ORTHO05D008828 1.5e-07 60.1 90 33.3
TPR.G29685 Trifolium pratense HOM05D007085 ORTHO05D008828 1.5e-07 60.1 90 32.2
Lsat_1_v5_gn_9_75000 Lactuca sativa HOM05D007660 ORTHO05D009442 3.4e-07 58.9 99 31.3
Nitab4.5_0010740g0020 Nicotiana tabacum HOM05D000424 ORTHO05D000355 3.4e-07 58.9 93 32.3
AL6G52005 Arabidopsis lyrata HOM05D002391 ORTHO05D004870 4.5e-07 58.5 95 32.6
Rhsim05G0081400 Rhododendron simsii HOM05D006858 ORTHO05D008767 7.6e-07 57.8 107 31.8
TAR381G0265 Trochodendron aralioides HOM05D000424 ORTHO05D000355 7.6e-07 57.8 93 31.2
FAN03G0748 Fragaria x ananassa HOM05D003210 ORTHO05D000001 1.0e-06 57.4 93 34.4
AUR62039467 Chenopodium quinoa HOM05D003210 ORTHO05D000001 1.3e-06 57.0 101 25.7
QL11p037400 Quercus lobata HOM05D006858 ORTHO05D008767 1.3e-06 57.0 106 31.1
PGSC0003DMG400006810 Solanum tuberosum HOM05D030225 ORTHO05D020317 1.3e-06 57.0 107 31.8
vmacro13394 Vaccinium macrocarpon HOM05D006858 ORTHO05D008767 1.7e-06 56.6 107 30.8
AUR62027713 Chenopodium quinoa HOM05D003210 ORTHO05D000001 2.2e-06 56.2 101 24.8
Dinv42632 Davidia involucrata HOM05D007660 ORTHO05D009442 2.2e-06 56.2 85 31.8
AT5G65560 Arabidopsis thaliana HOM05D003210 ORTHO05D000001 2.9e-06 55.8 86 29.1
Solyc01g007267.1 Solanum lycopersicum HOM05D000424 ORTHO05D000355 2.9e-06 55.8 93 31.2
BcaC01g02798 Brassica carinata HOM05D003210 ORTHO05D000001 3.8e-06 55.5 91 29.7
C03p60210 Brassica napus HOM05D003210 ORTHO05D000001 3.8e-06 55.5 91 29.7
BolC3t18283H Brassica oleracea HOM05D003210 ORTHO05D000001 3.8e-06 55.5 91 29.7
CiPaw.07G037000 Carya illinoinensis HOM05D000424 ORTHO05D000355 3.8e-06 55.5 93 31.2
COL.COLO4_35387 Corchorus olitorius HOM05D006707 ORTHO05D008243 3.8e-06 55.5 106 28.3
Aqoxy6G02961 Aquilegia oxysepala HOM05D000424 ORTHO05D000355 4.9e-06 55.1 93 31.2
FvH4_7g04271 Fragaria vesca HOM05D003210 ORTHO05D000001 4.9e-06 55.1 86 34.9
Nitab4.5_0000020g0300 Nicotiana tabacum HOM05D000424 ORTHO05D000355 4.9e-06 55.1 93 31.2
TAR624G0606 Trochodendron aralioides HOM05D002986 ORTHO05D007611 4.9e-06 55.1 115 29.6
ATR0796G067 Amborella trichopoda HOM05D000424 ORTHO05D000355 6.5e-06 54.7 77 33.8
arahy.Tifrunner.gnm1.ann1.X9L3V8 Arachis hypogaea HOM05D016220 ORTHO05D018479 6.5e-06 54.7 84 32.1
MD15G1441200 Malus domestica HOM05D003210 ORTHO05D000001 6.5e-06 54.7 109 31.2
Atru.ctg752_3.82 Acer truncatum HOM05D002453 ORTHO05D008746 8.4e-06 54.3 73 37.0
CSS0011638 Camellia sinensis var. sinensis HOM05D000424 ORTHO05D000355 8.4e-06 54.3 93 31.2
CSS0044152 Camellia sinensis var. sinensis HOM05D000424 ORTHO05D000355 8.4e-06 54.3 93 31.2
Dinv26965 Davidia involucrata HOM05D000424 ORTHO05D000355 8.4e-06 54.3 93 30.1
Lalb_Chr13g0290421 Lupinus albus HOM05D000424 ORTHO05D000355 8.4e-06 54.3 93 31.2
Sp2g28660 Schrenkiella parvula HOM05D003210 ORTHO05D000001 8.4e-06 54.3 86 29.1


User provided reference genes

Program Settings