Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g058310 Medicago truncatula HOM05D001101 ORTHO05D000893 6.0e-29 130.2 67 100.0
Ca_06629_v3 Cicer arietinum L. HOM05D001101 ORTHO05D000893 1.2e-16 89.4 67 71.6
Psat0s2485g0080 Pisum sativum HOM05D001101 ORTHO05D000893 1.6e-10 68.9 63 65.1
VMungo1127G0294 Vigna mungo HOM05D001101 ORTHO05D000893 2.8e-10 68.2 67 58.2
Thecc.07G126600 Theobroma cacao HOM05D001101 ORTHO05D000893 3.7e-10 67.8 67 59.7
TPR.G16052 Trifolium pratense HOM05D001101 ORTHO05D000893 1.4e-09 65.9 66 60.6
Lj3g0027156 Lotus japonicus HOM05D001101 ORTHO05D000893 3.1e-09 64.7 67 56.7
Phvul.011G166300 Phaseolus vulgaris HOM05D001101 ORTHO05D000893 4.0e-09 64.3 61 62.3
Cfa019545 Carpinus fangiana HOM05D001101 ORTHO05D000893 5.3e-09 63.9 62 56.5
COL.COLO4_17509 Corchorus olitorius HOM05D001101 ORTHO05D000893 6.9e-09 63.5 58 60.3
Duzib213G1057 Durio zibethinus HOM05D001101 ORTHO05D000893 6.9e-09 63.5 67 58.2
Gohir.A04G043400 Gossypium hirsutum HOM05D001101 ORTHO05D000893 6.9e-09 63.5 60 58.3
Gohir.D05G340200 Gossypium hirsutum HOM05D001101 ORTHO05D000893 6.9e-09 63.5 60 58.3
Gorai.009G366600 Gossypium raimondii HOM05D001101 ORTHO05D000893 6.9e-09 63.5 60 58.3
Haze_09307 Corylus avellana HOM05D001101 ORTHO05D000893 9.0e-09 63.2 66 54.5
Glyma.13G268500 Glycine max HOM05D001101 ORTHO05D000893 9.0e-09 63.2 68 57.4
QL08p025698 Quercus lobata HOM05D001101 ORTHO05D000893 9.0e-09 63.2 68 58.8
CSS0019453 Camellia sinensis var. sinensis HOM05D001101 ORTHO05D000893 7.6e-08 60.1 60 56.7
CAN.G375.25 Capsicum annuum HOM05D001101 ORTHO05D000893 1.3e-07 59.3 66 51.5
CSS0031512 Camellia sinensis var. sinensis HOM05D001101 ORTHO05D000893 2.2e-07 58.5 61 57.4
Medtr2g075860 Medicago truncatula HOM05D001101 ORTHO05D000893 2.2e-07 58.5 65 58.5
Nitab4.5_0016997g0010 Nicotiana tabacum HOM05D001101 ORTHO05D000893 2.2e-07 58.5 66 50.0
VMungo1080G1788 Vigna mungo HOM05D001101 ORTHO05D000893 2.2e-07 58.5 68 51.5
TWI39G0632 Tripterygium wilfordii HOM05D001101 ORTHO05D000893 2.9e-07 58.2 67 50.7
Lj3g0007321 Lotus japonicus HOM05D001101 ORTHO05D000893 3.8e-07 57.8 58 62.1
CiPaw.12G112600 Carya illinoinensis HOM05D001101 ORTHO05D000893 4.9e-07 57.4 68 48.5
Dinv18380 Davidia involucrata HOM05D001101 ORTHO05D000893 4.9e-07 57.4 67 52.2
Phvul.005G081000 Phaseolus vulgaris HOM05D001101 ORTHO05D000893 4.9e-07 57.4 68 51.5
Solyc07g062300.3 Solanum lycopersicum HOM05D001101 ORTHO05D000893 6.5e-07 57.0 66 48.5
Sopen07g030570 Solanum pennellii HOM05D001101 ORTHO05D000893 6.5e-07 57.0 66 48.5
TAR627G0318 Trochodendron aralioides HOM05D001101 ORTHO05D000893 6.5e-07 57.0 60 55.0
arahy.Tifrunner.gnm1.ann1.I5PA0N Arachis hypogaea HOM05D001101 ORTHO05D000893 8.4e-07 56.6 64 57.8
arahy.Tifrunner.gnm1.ann1.R550IY Arachis hypogaea HOM05D001101 ORTHO05D000893 8.4e-07 56.6 64 57.8
TWI38G2134 Tripterygium wilfordii HOM05D001101 ORTHO05D000893 8.4e-07 56.6 71 47.9
TAR626G0991 Trochodendron aralioides HOM05D001101 ORTHO05D000893 8.4e-07 56.6 49 59.2
Peaxi162Scf00111g01465 Petunia axillaris HOM05D001101 ORTHO05D000893 1.1e-06 56.2 60 48.3
Actinidia18809 Actinidia chinensis HOM05D001101 ORTHO05D000893 1.4e-06 55.8 54 57.4
PGSC0003DMG400007097 Solanum tuberosum HOM05D001101 ORTHO05D000893 1.9e-06 55.5 66 47.0
FAN21G1665 Fragaria x ananassa HOM05D001101 ORTHO05D000893 2.5e-06 55.1 71 47.9
Nn3g21084 Nelumbo nucifera HOM05D001101 ORTHO05D000893 2.5e-06 55.1 49 61.2
PGR031G1547 Punica granatum HOM05D001101 ORTHO05D000893 2.5e-06 55.1 67 50.7
FvH4_3g18140 Fragaria vesca HOM05D001101 ORTHO05D000893 7.1e-06 53.5 51 56.9
FAN11G2831 Fragaria x ananassa HOM05D001101 ORTHO05D000893 7.1e-06 53.5 51 56.9
FAN16G1275 Fragaria x ananassa HOM05D001101 ORTHO05D000893 7.1e-06 53.5 51 56.9
FAN25G0535 Fragaria x ananassa HOM05D001101 ORTHO05D000893 7.1e-06 53.5 68 48.5
RcHm_v2.0_Chr5g0030571 Rosa chinensis HOM05D001101 ORTHO05D000893 7.1e-06 53.5 51 56.9
Cpa.g.sc77.33 Carica papaya HOM05D001101 ORTHO05D000893 9.3e-06 53.1 68 51.5


User provided reference genes

Program Settings