Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g046830 Medicago truncatula HOM05D005801 ORTHO05D008555 1.2e-46 189.5 96 100.0
Medtr8g102480 Medicago truncatula HOM05D005801 ORTHO05D008555 5.6e-28 127.5 65 100.0
Ca_17365_v3 Cicer arietinum L. HOM05D005801 ORTHO05D008555 3.3e-20 101.7 65 84.6
Psat7g016720 Pisum sativum HOM05D005801 ORTHO05D008555 2.3e-18 95.5 64 82.8
Phvul.002G308600 Phaseolus vulgaris HOM05D005801 ORTHO05D008555 1.3e-16 89.7 56 78.6
Glyma.08G033500 Glycine max HOM05D005801 ORTHO05D008555 2.2e-16 89.0 60 71.7
VMungo0251G1949 Vigna mungo HOM05D005801 ORTHO05D008555 1.9e-15 85.9 56 73.2
Lj4g0016627 Lotus japonicus HOM05D005801 ORTHO05D008555 2.7e-14 82.0 51 82.4
Lalb_Chr05g0223241 Lupinus albus HOM05D005801 ORTHO05D008555 9.6e-12 73.6 60 65.0
arahy.Tifrunner.gnm1.ann1.BF4XTR Arachis hypogaea HOM05D005801 ORTHO05D008555 2.1e-11 72.4 51 72.5
Lalb_Chr09g0331541 Lupinus albus HOM05D005801 ORTHO05D008555 8.9e-10 67.0 55 65.5
CSS0008146 Camellia sinensis var. sinensis HOM05D005801 ORTHO05D008555 9.9e-09 63.5 49 67.3
Rhsim03G0236600 Rhododendron simsii HOM05D005801 ORTHO05D008555 1.7e-08 62.8 56 62.5
vmacro06253 Vaccinium macrocarpon HOM05D005801 ORTHO05D008555 2.9e-08 62.0 56 60.7
Gohir.A07G009500 Gossypium hirsutum HOM05D005801 ORTHO05D008555 6.4e-08 60.8 60 56.7
Gohir.D07G009800 Gossypium hirsutum HOM05D005801 ORTHO05D008555 6.4e-08 60.8 60 56.7
Cfa003179 Carpinus fangiana HOM05D005801 ORTHO05D008555 1.4e-07 59.7 49 63.3
PSO063G7511 Papaver somniferum HOM05D005801 ORTHO05D008555 1.4e-07 59.7 54 55.6
PSO832G4312 Papaver somniferum HOM05D005801 ORTHO05D008555 1.4e-07 59.7 54 55.6
DCAR_028663 Daucus carota HOM05D005801 ORTHO05D008555 1.9e-07 59.3 59 55.9
TAR636G1320 Trochodendron aralioides HOM05D005801 ORTHO05D008555 1.9e-07 59.3 49 61.2
FAN19G1715 Fragaria x ananassa HOM05D005801 ORTHO05D008555 2.4e-07 58.9 49 61.2
Oeu053186.1 Olea europaea HOM05D005801 ORTHO05D008555 2.4e-07 58.9 57 57.9
Cc06_g10480 Coffea canephora HOM05D005801 ORTHO05D008555 3.2e-07 58.5 57 52.6
FAN28G2516 Fragaria x ananassa HOM05D005801 ORTHO05D008555 3.2e-07 58.5 68 47.1
Gorai.001G010100 Gossypium raimondii HOM05D005801 ORTHO05D008555 3.2e-07 58.5 60 55.0
Manes.16G108700 Manihot esculenta HOM05D005801 ORTHO05D008555 3.2e-07 58.5 50 64.0
Lj4P387T11 Lonicera japonica HOM05D005801 ORTHO05D008555 4.2e-07 58.2 47 66.0
Actinidia32650 Actinidia chinensis HOM05D005801 ORTHO05D008555 5.4e-07 57.8 49 63.3
QL02p041581 Quercus lobata HOM05D005801 ORTHO05D008555 5.4e-07 57.8 49 63.3
FAN19G0317 Fragaria x ananassa HOM05D005801 ORTHO05D008555 7.1e-07 57.4 68 47.1
FAN23G0343 Fragaria x ananassa HOM05D005801 ORTHO05D008555 7.1e-07 57.4 68 47.1
FAN26G1315 Fragaria x ananassa HOM05D005801 ORTHO05D008555 7.1e-07 57.4 68 47.1
COL.COLO4_34743 Corchorus olitorius HOM05D005801 ORTHO05D008555 9.3e-07 57.0 57 54.4
FvH4_1g06150 Fragaria vesca HOM05D005801 ORTHO05D008555 9.3e-07 57.0 49 59.2
FAN26G1273 Fragaria x ananassa HOM05D005801 ORTHO05D008555 9.3e-07 57.0 68 47.1
Aqoxy7G01401 Aquilegia oxysepala HOM05D005801 ORTHO05D008555 1.6e-06 56.2 59 57.6
AUR62010892 Chenopodium quinoa HOM05D005801 ORTHO05D008555 1.6e-06 56.2 58 53.4
MD15G1196600 Malus domestica HOM05D005801 ORTHO05D008555 1.6e-06 56.2 65 46.2
Potri.018G087800 Populus trichocarpa HOM05D005801 ORTHO05D008555 2.1e-06 55.8 47 63.8
Sabra18G0076100 Salix brachista HOM05D005801 ORTHO05D008555 2.1e-06 55.8 47 66.0
Duzib150G1339 Durio zibethinus HOM05D005801 ORTHO05D008555 3.5e-06 55.1 50 56.0
MD02G1065700 Malus domestica HOM05D005801 ORTHO05D008555 4.6e-06 54.7 65 44.6
Prupe.7G219800 Prunus persica HOM05D005801 ORTHO05D008555 4.6e-06 54.7 65 47.7
SalBow1G2797 Salvia bowleyana HOM05D005801 ORTHO05D008555 4.6e-06 54.7 39 71.8
Thecc.09G100600 Theobroma cacao HOM05D005801 ORTHO05D008555 4.6e-06 54.7 50 58.0
Sc18g0001500 Simmondsia chinensis HOM05D005801 ORTHO05D008555 6.0e-06 54.3 51 64.7


User provided reference genes

Program Settings