Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g042980 Medicago truncatula HOM05D011102 ORTHO05D012626 9.4e-35 149.8 86 100.0
Psat4g143320 Pisum sativum HOM05D011102 ORTHO05D012626 2.1e-26 122.1 87 81.6
TPR.G25006 Trifolium pratense HOM05D011102 ORTHO05D012626 8.3e-23 110.2 81 86.4
Psat2g156200 Pisum sativum HOM05D011102 ORTHO05D012626 2.0e-21 105.5 84 79.8
TPR.G2397 Trifolium pratense HOM05D011102 ORTHO05D012626 2.1e-18 95.5 76 80.3
Lalb_Chr01g0007581 Lupinus albus HOM05D011102 ORTHO05D012626 6.6e-12 73.9 80 62.5
Lj3g0027722 Lotus japonicus HOM05D011102 ORTHO05D012626 2.5e-11 72.0 90 56.7
Glyma.13G185900 Glycine max HOM05D011102 ORTHO05D012626 3.3e-11 71.6 89 57.3
Glyma.15G223300 Glycine max HOM05D011102 ORTHO05D012626 7.2e-11 70.5 90 58.9
arahy.Tifrunner.gnm1.ann1.49XFRR Arachis hypogaea HOM05D011102 ORTHO05D012626 1.8e-09 65.9 97 50.5
arahy.Tifrunner.gnm1.ann1.W3NPYL Arachis hypogaea HOM05D011102 ORTHO05D012626 1.8e-09 65.9 96 49.0
Glyma.13G185800 Glycine max HOM05D011102 ORTHO05D012626 5.7e-08 60.8 88 54.5
Lalb_Chr19g0132681 Lupinus albus HOM05D011102 ORTHO05D012626 6.3e-07 57.4 80 52.5
Glyma.13G185600 Glycine max HOM05D011102 ORTHO05D012626 1.8e-06 55.8 82 51.2
Potri.010G247750 Populus trichocarpa HOM05D011102 ORTHO05D012626 1.8e-06 55.8 91 47.3
Phvul.011G188700 Phaseolus vulgaris HOM05D011102 ORTHO05D012626 4.1e-06 54.7 109 42.2


User provided reference genes

Program Settings