Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g040590 Medicago truncatula HOM05D000071 ORTHO05D000029 1.8e-33 145.6 86 100.0
Medtr8g040910 Medicago truncatula HOM05D000071 ORTHO05D000029 5.5e-27 124.0 82 91.5
Medtr8g040985 Medicago truncatula HOM05D000071 ORTHO05D000029 1.8e-17 92.4 64 73.4
Medtr8g040920 Medicago truncatula HOM05D000071 ORTHO05D000029 7.0e-14 80.5 85 68.2
Medtr8g041100 Medicago truncatula HOM05D000071 ORTHO05D000029 1.6e-13 79.3 39 92.3
Medtr8g041150 Medicago truncatula HOM05D000071 ORTHO05D000029 2.0e-13 79.0 42 88.1
Ca_26432_v3 Cicer arietinum L. HOM05D000071 ORTHO05D000029 5.0e-12 74.3 64 59.4
arahy.Tifrunner.gnm1.ann1.FT8TT0 Arachis hypogaea HOM05D000071 ORTHO05D000029 3.3e-11 71.6 86 45.3
TPR.G35407 Trifolium pratense HOM05D001169 ORTHO05D000029 1.2e-10 69.7 85 44.7
arahy.Tifrunner.gnm1.ann1.JP5T2C Arachis hypogaea HOM05D000071 ORTHO05D000029 3.6e-10 68.2 72 66.7
RcHm_v2.0_Chr7g0206751 Rosa chinensis HOM05D000071 ORTHO05D000029 6.1e-10 67.4 84 59.5
Medtr8g040925 Medicago truncatula HOM05D000071 ORTHO05D000029 1.0e-09 66.6 39 74.4
Medtr8g041190 Medicago truncatula HOM05D000071 ORTHO05D000029 1.0e-09 66.6 39 74.4
TPR.G29245 Trifolium pratense HOM05D000071 ORTHO05D000029 6.8e-09 63.9 63 52.4
TPR.G1838 Trifolium pratense HOM05D000071 ORTHO05D000029 1.2e-08 63.2 85 42.4
Dinv29279 Davidia involucrata HOM05D000071 ORTHO05D028257 1.5e-08 62.8 81 61.7
FAN10G1314 Fragaria x ananassa HOM05D000053 ORTHO05D000035 1.5e-08 62.8 76 59.2
GSVIVG01036793001 Vitis vinifera HOM05D000053 ORTHO05D000035 1.5e-08 62.8 81 60.5
Dinv07787 Davidia involucrata HOM05D000034 ORTHO05D000277 2.6e-08 62.0 88 58.0
Glyma.16G186250 Glycine max HOM05D000071 ORTHO05D000029 4.4e-08 61.2 74 44.6
FAN10G4247 Fragaria x ananassa HOM05D000053 ORTHO05D000035 7.5e-08 60.5 73 57.5
DCAR_012607 Daucus carota HOM05D000053 ORTHO05D000035 9.8e-08 60.1 83 51.8
Gorai.002G264800 Gossypium raimondii HOM05D001169 ORTHO05D048205 1.3e-07 59.7 82 42.7
RhsimUnG0143600 Rhododendron simsii HOM05D000071 ORTHO05D000029 1.3e-07 59.7 85 41.2
RhsimUnG0134000 Rhododendron simsii HOM05D008944 ORTHO05D012715 2.2e-07 58.9 85 41.2
Atru.chr5.2917 Acer truncatum HOM05D000071 ORTHO05D000029 2.8e-07 58.5 72 61.1
Peaxi162Scf00983g00032 Petunia axillaris HOM05D000071 ORTHO05D000029 2.8e-07 58.5 71 64.8
Sabra15G0021600 Salix brachista HOM05D000071 ORTHO05D011302 2.8e-07 58.5 69 56.5
Psat2g098920 Pisum sativum HOM05D001169 ORTHO05D000029 3.7e-07 58.2 89 38.2
Psat6g194280 Pisum sativum HOM05D000071 ORTHO05D000029 3.7e-07 58.2 90 52.2
Rhsim05G0176400 Rhododendron simsii HOM05D000071 ORTHO05D000029 3.7e-07 58.2 70 64.3
MBI11_g24418_MAGBIO Magnolia biondii HOM05D000071 ORTHO05D000029 6.3e-07 57.4 73 60.3
RcHm_v2.0_Chr4g0401581 Rosa chinensis HOM05D001506 ORTHO05D000029 8.3e-07 57.0 71 59.2
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 1.1e-06 56.6 70 44.3
Gohir.D11G300706 Gossypium hirsutum HOM05D000071 ORTHO05D000029 1.1e-06 56.6 83 51.8
QL05p001018 Quercus lobata HOM05D000071 ORTHO05D000029 1.1e-06 56.6 71 62.0
Thecc.10G168600 Theobroma cacao HOM05D000053 ORTHO05D000035 1.1e-06 56.6 82 53.7
TAR374G0292 Trochodendron aralioides HOM05D000071 ORTHO05D000029 1.1e-06 56.6 89 39.3
Duzib120G0002 Durio zibethinus HOM05D000071 ORTHO05D000029 1.4e-06 56.2 82 40.2
Ciclev10017447m.g Citrus clementina HOM05D000053 ORTHO05D000035 1.8e-06 55.8 83 55.4
Rhsim05G0176600 Rhododendron simsii HOM05D000071 ORTHO05D000029 1.8e-06 55.8 71 60.6
Duzib106G1041 Durio zibethinus HOM05D000071 ORTHO05D000029 2.4e-06 55.5 82 50.0
Gorai.002G060500 Gossypium raimondii HOM05D000053 ORTHO05D000035 2.4e-06 55.5 77 40.3
Lj5g0026935 Lotus japonicus HOM05D000071 ORTHO05D000029 3.1e-06 55.1 34 67.6
Psat0s2040g0080 Pisum sativum HOM05D000071 ORTHO05D000029 5.4e-06 54.3 36 69.4
HanXRQChr07g0205271 Helianthus annuus HOM05D000071 ORTHO05D000029 7.0e-06 53.9 77 37.7
TPR.G30191 Trifolium pratense HOM05D025143 ORTHO05D000029 7.0e-06 53.9 90 36.7
RcHm_v2.0_Chr5g0082631 Rosa chinensis HOM05D000071 ORTHO05D000029 9.2e-06 53.5 83 38.6


User provided reference genes

Program Settings