Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g039230 Medicago truncatula HOM05D002907 ORTHO05D000065 1.1e-107 393.3 189 100.0
Medtr4g070090 Medicago truncatula HOM05D002907 ORTHO05D000065 1.2e-82 310.1 199 79.9
Medtr5g027390 Medicago truncatula HOM05D002907 ORTHO05D000065 8.0e-79 297.4 185 81.6
Medtr3g032330 Medicago truncatula HOM05D002907 ORTHO05D000065 9.5e-64 247.3 189 67.2
TPR.G6063 Trifolium pratense HOM05D000096 ORTHO05D000065 1.3e-36 157.1 184 46.7
TPR.G13958 Trifolium pratense HOM05D036439 ORTHO05D010576 3.8e-36 155.6 177 46.3
TPR.G28204 Trifolium pratense HOM05D002907 ORTHO05D000065 9.6e-32 141.0 168 45.8
TPR.G8032 Trifolium pratense HOM05D002907 ORTHO05D000065 7.9e-26 121.3 119 50.4
QL03p025410 Quercus lobata HOM05D000005 ORTHO05D000065 2.5e-16 89.7 167 35.9
QL10p011037 Quercus lobata HOM05D002907 ORTHO05D000065 7.6e-13 78.2 171 31.6
QL07p007200 Quercus lobata HOM05D000096 ORTHO05D000045 1.7e-12 77.0 168 29.8
Hma1.2p1_0006F.1_g004680 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 1.4e-11 73.9 180 28.3
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 1.9e-11 73.6 167 26.3
DCAR_002003 Daucus carota HOM05D000798 ORTHO05D002621 7.1e-11 71.6 157 29.3
Thecc.06G139500 Theobroma cacao HOM05D007876 ORTHO05D010433 7.9e-10 68.2 150 28.0
Medtr6g073570 Medicago truncatula HOM05D008036 ORTHO05D000174 1.1e-08 64.3 167 25.7
Medtr7g045450 Medicago truncatula HOM05D008036 ORTHO05D000174 1.1e-08 64.3 167 25.7
Aqoxy4G01383 Aquilegia oxysepala HOM05D002907 ORTHO05D000065 1.5e-08 63.9 156 28.2
Aqoxy4G03175 Aquilegia oxysepala HOM05D002907 ORTHO05D000065 1.9e-08 63.5 156 28.8
Aqoxy5G04189 Aquilegia oxysepala HOM05D002907 ORTHO05D000065 1.9e-08 63.5 156 28.8
DCAR_031855 Daucus carota HOM05D002492 ORTHO05D002621 4.3e-08 62.4 158 29.1
Hma1.2p1_0051F.1_g029450 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 5.7e-08 62.0 148 31.1
Os07g0190600 Oryza sativa ssp. japonica HOM05D008312 ORTHO05D007430 9.7e-08 61.2 175 27.4
Medtr6g465570 Medicago truncatula HOM05D008036 ORTHO05D008317 2.2e-07 60.1 148 31.1
ECA135G0004 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.8e-07 58.9 150 27.3
ECA234G1952 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.8e-07 58.9 150 27.3
ECA236G3020 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.8e-07 58.9 150 27.3
DCAR_002704 Daucus carota HOM05D002492 ORTHO05D002621 6.3e-07 58.5 172 27.3
DCAR_026108 Daucus carota HOM05D002492 ORTHO05D002621 6.3e-07 58.5 172 27.3
COL.COLO4_19791 Corchorus olitorius HOM05D000096 ORTHO05D007430 8.2e-07 58.2 132 27.3
SGA_v2.0_scaffold142G35618 Striga asiatica HOM05D002090 ORTHO05D001923 8.2e-07 58.2 153 26.8
SGA_v2.0_scaffold53G19410 Striga asiatica HOM05D002090 ORTHO05D000174 8.2e-07 58.2 153 26.8
ECA232G1482 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.1e-06 57.8 154 29.2
Aqoxy4G01459 Aquilegia oxysepala HOM05D002907 ORTHO05D000174 1.4e-06 57.4 140 25.0
Aqoxy5G02969 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 1.4e-06 57.4 140 25.0
Thecc.10G144400 Theobroma cacao HOM05D000096 ORTHO05D007430 3.1e-06 56.2 89 32.6
SGA_v2.0_scaffold29G12295 Striga asiatica HOM05D002090 ORTHO05D001923 5.3e-06 55.5 139 30.2
COL.COLO4_03822 Corchorus olitorius HOM05D007876 ORTHO05D007430 6.9e-06 55.1 156 26.9
COL.COLO4_03882 Corchorus olitorius HOM05D007876 ORTHO05D007430 6.9e-06 55.1 156 26.9
COL.COLO4_33148 Corchorus olitorius HOM05D000096 ORTHO05D000045 9.0e-06 54.7 156 23.7
Medtr1g105785 Medicago truncatula HOM05D008036 ORTHO05D000174 9.0e-06 54.7 156 25.6


User provided reference genes

Program Settings