Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g038765 Medicago truncatula HOM05D056746 ORTHO05D002407 1.1e-180 636.7 377 100.0
Medtr8g008640 Medicago truncatula HOM05D000371 ORTHO05D001484 5.2e-21 106.3 230 39.6
Medtr8g038775 Medicago truncatula HOM05D056746 ORTHO05D266886 3.4e-20 103.6 55 96.4
ECA233G6204 Erigeron canadensis HOM05D002342 ORTHO05D002407 1.2e-09 68.6 130 31.5
Ca_17971_v3 Cicer arietinum L. HOM05D002342 ORTHO05D002407 2.7e-09 67.4 134 32.1
Medtr8g085280 Medicago truncatula HOM05D002342 ORTHO05D002407 2.7e-09 67.4 158 29.7
PSO017G5596 Papaver somniferum HOM05D002342 ORTHO05D002407 2.7e-09 67.4 141 29.1
PSO063G4028 Papaver somniferum HOM05D002342 ORTHO05D002407 2.7e-09 67.4 140 30.0
PGR083G1386 Punica granatum HOM05D002342 ORTHO05D002407 2.7e-09 67.4 129 32.6
TPR.G357 Trifolium pratense HOM05D038100 ORTHO05D036767 2.7e-09 67.4 139 33.1
arahy.Tifrunner.gnm1.ann1.ZGTC82 Arachis hypogaea HOM05D002342 ORTHO05D002407 4.6e-09 66.6 110 33.6
Eucgr.H02754 Eucalyptus grandis HOM05D002342 ORTHO05D002407 1.0e-08 65.5 140 30.0
Eucgr.H02757 Eucalyptus grandis HOM05D002342 ORTHO05D002407 1.3e-08 65.1 140 30.0
Lsat_1_v5_gn_6_60921 Lactuca sativa HOM05D002342 ORTHO05D002407 1.3e-08 65.1 112 33.9
HPP92_003865 Vanilla planifolia HOM05D002342 ORTHO05D002407 1.3e-08 65.1 135 33.3
CANSAT78G2520 Cannabis sativa HOM05D002342 ORTHO05D002407 1.7e-08 64.7 138 29.7
PSO017G1666 Papaver somniferum HOM05D002342 ORTHO05D002407 1.7e-08 64.7 112 30.4
PSO063G7363 Papaver somniferum HOM05D002342 ORTHO05D002407 2.3e-08 64.3 112 30.4
Lj4g0001754 Lotus japonicus HOM05D002342 ORTHO05D002407 3.0e-08 63.9 135 31.1
TAR365G0670 Trochodendron aralioides HOM05D002342 ORTHO05D002407 3.0e-08 63.9 137 29.2
TAR365G0690 Trochodendron aralioides HOM05D002342 ORTHO05D002407 3.0e-08 63.9 137 29.2
Phvul.003G291200 Phaseolus vulgaris HOM05D002342 ORTHO05D002407 3.9e-08 63.5 129 31.8
GSVIVG01020920001 Vitis vinifera HOM05D002342 ORTHO05D002407 5.1e-08 63.2 111 32.4
Glyma.08G111400 Glycine max HOM05D002342 ORTHO05D002407 6.6e-08 62.8 193 26.9
Prupe.1G159000 Prunus persica HOM05D002342 ORTHO05D002407 6.6e-08 62.8 132 29.5
VMungo1127G2260 Vigna mungo HOM05D002342 ORTHO05D002407 6.6e-08 62.8 159 30.2
HanXRQChr11g0339061 Helianthus annuus HOM05D002342 ORTHO05D002407 8.6e-08 62.4 128 33.6
Eucgr.H02765 Eucalyptus grandis HOM05D002342 ORTHO05D002407 1.1e-07 62.0 140 27.9
SEGI_10632 Sequoiadendron giganteum HOM05D002342 ORTHO05D002407 1.1e-07 62.0 112 30.4
SEGI_23744 Sequoiadendron giganteum HOM05D002342 ORTHO05D002407 1.1e-07 62.0 112 30.4
MBI04_g21151_MAGBIO Magnolia biondii HOM05D002342 ORTHO05D002407 1.9e-07 61.2 134 28.4
ECA246G4020 Erigeron canadensis HOM05D002342 ORTHO05D002407 2.5e-07 60.8 121 33.9
Lalb_Chr12g0205541 Lupinus albus HOM05D002342 ORTHO05D002407 2.5e-07 60.8 128 32.0
Aqoxy2G03980 Aquilegia oxysepala HOM05D002342 ORTHO05D002407 4.3e-07 60.1 113 29.2
ECA233G4700 Erigeron canadensis HOM05D002342 ORTHO05D002407 4.3e-07 60.1 122 32.0
Dinv38212 Davidia involucrata HOM05D002342 ORTHO05D002407 5.6e-07 59.7 110 30.9
HanXRQChr02g0059031 Helianthus annuus HOM05D002342 ORTHO05D002407 5.6e-07 59.7 105 34.3
Ah.14g086370 Amaranthus hybridus HOM05D002342 ORTHO05D002407 7.3e-07 59.3 111 27.9
DCAR_030811 Daucus carota HOM05D002342 ORTHO05D002407 7.3e-07 59.3 111 33.3
HanXRQChr16g0515531 Helianthus annuus HOM05D000002 ORTHO05D000001 7.3e-07 59.3 110 32.7
COL.COLO4_20180 Corchorus olitorius HOM05D002342 ORTHO05D002407 1.2e-06 58.5 122 28.7
Eucgr.H02741 Eucalyptus grandis HOM05D002342 ORTHO05D002407 1.2e-06 58.5 131 28.2
Cpa.g.c30822.1 Carica papaya HOM05D002342 ORTHO05D002407 1.6e-06 58.2 85 34.1
Migut.N01843 Erythranthe guttata HOM05D002342 ORTHO05D002407 2.1e-06 57.8 105 30.5
RcHm_v2.0_Chr4g0414341 Rosa chinensis HOM05D002342 ORTHO05D002407 2.1e-06 57.8 112 31.2
TPR.G3986 Trifolium pratense HOM05D002342 ORTHO05D002407 2.8e-06 57.4 214 26.6
Migut.N00402 Erythranthe guttata HOM05D002342 ORTHO05D002407 3.6e-06 57.0 109 28.4
QL05p014435 Quercus lobata HOM05D002342 ORTHO05D002407 3.6e-06 57.0 105 30.5
RcHm_v2.0_Chr4g0414351 Rosa chinensis HOM05D002342 ORTHO05D002407 3.6e-06 57.0 110 30.9
AUR62018579 Chenopodium quinoa HOM05D002342 ORTHO05D002407 4.7e-06 56.6 111 28.8
AUR62018583 Chenopodium quinoa HOM05D002342 ORTHO05D002407 4.7e-06 56.6 111 28.8
FvH4_4g13660 Fragaria vesca HOM05D002342 ORTHO05D002407 4.7e-06 56.6 134 29.1
FAN12G2750 Fragaria x ananassa HOM05D002342 ORTHO05D002407 4.7e-06 56.6 134 29.1
FAN22G0412 Fragaria x ananassa HOM05D002342 ORTHO05D002407 4.7e-06 56.6 134 29.1
QL05p014243 Quercus lobata HOM05D002342 ORTHO05D002407 4.7e-06 56.6 130 26.9
ECA233G4033 Erigeron canadensis HOM05D002342 ORTHO05D002407 6.2e-06 56.2 85 37.6
Eucgr.A01634 Eucalyptus grandis HOM05D002342 ORTHO05D002407 6.2e-06 56.2 134 27.6
Gohir.A03G095600 Gossypium hirsutum HOM05D002342 ORTHO05D002407 6.2e-06 56.2 129 28.7
Gohir.D02G113900 Gossypium hirsutum HOM05D002342 ORTHO05D002407 6.2e-06 56.2 129 28.7
Gorai.005G129600 Gossypium raimondii HOM05D002342 ORTHO05D002407 6.2e-06 56.2 129 28.7
CAN.G1333.8 Capsicum annuum HOM05D002342 ORTHO05D002407 8.1e-06 55.8 104 29.8
HanXRQChr16g0498001 Helianthus annuus HOM05D002342 ORTHO05D002407 8.1e-06 55.8 123 30.1


User provided reference genes

Program Settings