Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g038700 Medicago truncatula HOM05D004090 ORTHO05D002871 3.4e-239 831.2 412 100.0
TPR.G15018 Trifolium pratense HOM05D004090 ORTHO05D002871 1.1e-75 288.1 177 79.7
Lj1g0008049 Lotus japonicus HOM05D004090 ORTHO05D002871 5.3e-51 206.1 467 31.5
Lj1g0026190 Lotus japonicus HOM05D005861 ORTHO05D007151 3.4e-42 176.8 371 31.8
Psat1g162280 Pisum sativum HOM05D004090 ORTHO05D002871 2.6e-34 150.6 192 42.7
VMungo1309G2480 Vigna mungo HOM05D004090 ORTHO05D002871 3.7e-28 130.2 157 43.3
VMungo0647G0392 Vigna mungo HOM05D008534 ORTHO05D002871 6.3e-28 129.4 173 35.8
VMungo1012G0002 Vigna mungo HOM05D004090 ORTHO05D002871 1.4e-27 128.3 163 39.9
VMungo0464G0545 Vigna mungo HOM05D004090 ORTHO05D002871 2.4e-27 127.5 163 40.5
VMungo0720G0263 Vigna mungo HOM05D008534 ORTHO05D002871 3.1e-27 127.1 178 36.0
VMungo0720G1201 Vigna mungo HOM05D004090 ORTHO05D002871 4.1e-27 126.7 162 40.7
VMungo0647G1226 Vigna mungo HOM05D008534 ORTHO05D002871 7.0e-27 125.9 165 37.6
VMungo1012G0001 Vigna mungo HOM05D004090 ORTHO05D002871 7.0e-27 125.9 163 39.3
VMungo1215G0179 Vigna mungo HOM05D004090 ORTHO05D002871 7.0e-27 125.9 171 37.4
VMungo0720G0692 Vigna mungo HOM05D004090 ORTHO05D002871 9.1e-27 125.6 266 31.6
VMungo0251G1799 Vigna mungo HOM05D004090 ORTHO05D002871 1.6e-26 124.8 172 37.8
VMungo0647G2408 Vigna mungo HOM05D004090 ORTHO05D002871 7.7e-26 122.5 258 32.6
VMungo1215G3414 Vigna mungo HOM05D008534 ORTHO05D002871 1.0e-25 122.1 165 36.4
Medtr6g464440 Medicago truncatula HOM05D009048 ORTHO05D002871 1.7e-25 121.3 450 24.9
VMungo1127G0516 Vigna mungo HOM05D004090 ORTHO05D002871 1.7e-25 121.3 200 34.5
VMungo1309G1548 Vigna mungo HOM05D004090 ORTHO05D002871 1.7e-25 121.3 233 30.9
VMungo1127G0314 Vigna mungo HOM05D008534 ORTHO05D002871 2.9e-25 120.6 174 35.6
arahy.Tifrunner.gnm1.ann1.KCFV9M Arachis hypogaea HOM05D004090 ORTHO05D002871 3.8e-25 120.2 208 34.1
VMungo0720G0226 Vigna mungo HOM05D008534 ORTHO05D002871 3.8e-25 120.2 173 35.3
VMungo0464G0936 Vigna mungo HOM05D004090 ORTHO05D002871 6.5e-25 119.4 377 29.2
VMungo0331G0842 Vigna mungo HOM05D004090 ORTHO05D002871 8.5e-25 119.0 233 30.0
VMungo0540G0106 Vigna mungo HOM05D004090 ORTHO05D002871 8.5e-25 119.0 161 36.6
VMungo0540G0212 Vigna mungo HOM05D008534 ORTHO05D002871 8.5e-25 119.0 166 36.1
Phvul.008G104250 Phaseolus vulgaris HOM05D004090 ORTHO05D002871 1.1e-24 118.6 264 31.1
arahy.Tifrunner.gnm1.ann1.7N2XUP Arachis hypogaea HOM05D004090 ORTHO05D002871 2.5e-24 117.5 208 33.7
Medtr7g034050 Medicago truncatula HOM05D004090 ORTHO05D002871 3.2e-24 117.1 215 31.2
VMungo0251G2593 Vigna mungo HOM05D004090 ORTHO05D002871 4.2e-24 116.7 171 36.8
Phvul.004G085482 Phaseolus vulgaris HOM05D004090 ORTHO05D002871 5.5e-24 116.3 431 26.5
VMungo0331G1942 Vigna mungo HOM05D004090 ORTHO05D002871 7.2e-24 115.9 232 30.2
VMungo1127G0904 Vigna mungo HOM05D004090 ORTHO05D002871 7.2e-24 115.9 179 34.6
VMungo1368G0001 Vigna mungo HOM05D004090 ORTHO05D002871 9.4e-24 115.5 219 35.6
TPR.G15017 Trifolium pratense HOM05D004090 ORTHO05D002871 2.1e-23 114.4 128 56.2
Medtr3g450650 Medicago truncatula HOM05D004090 ORTHO05D002871 2.7e-23 114.0 214 31.3
VMungo1383G0926 Vigna mungo HOM05D004090 ORTHO05D002871 2.7e-23 114.0 252 31.3
Medtr0909s0020 Medicago truncatula HOM05D009048 ORTHO05D002871 8.0e-23 112.5 205 31.7
VMungo0464G2021 Vigna mungo HOM05D004090 ORTHO05D002871 1.0e-22 112.1 135 43.7
Medtr6g090350 Medicago truncatula HOM05D009048 ORTHO05D002871 1.4e-22 111.7 214 30.4
VMungo0647G1815 Vigna mungo HOM05D004090 ORTHO05D002871 1.4e-22 111.7 261 31.4
Medtr6g053030 Medicago truncatula HOM05D009048 ORTHO05D002871 2.3e-22 110.9 206 32.5
Medtr6g053040 Medicago truncatula HOM05D009048 ORTHO05D002871 5.2e-22 109.8 206 32.0
Medtr0202s0040 Medicago truncatula HOM05D009048 ORTHO05D002871 6.7e-22 109.4 205 31.2
Medtr3g048220 Medicago truncatula HOM05D009048 ORTHO05D002871 1.2e-21 108.6 235 29.4
VMungo0251G0079 Vigna mungo HOM05D008534 ORTHO05D002871 5.7e-21 106.3 254 29.1
VMungo1309G2246 Vigna mungo HOM05D004090 ORTHO05D002871 9.7e-21 105.5 164 34.8
Medtr6g034305 Medicago truncatula HOM05D009048 ORTHO05D002871 1.7e-20 104.8 294 25.2
VMungo0331G1889 Vigna mungo HOM05D004090 ORTHO05D002871 2.2e-20 104.4 147 38.1
VMungo1383G2750 Vigna mungo HOM05D004090 ORTHO05D002871 2.8e-20 104.0 146 37.0
VMungo1383G3110 Vigna mungo HOM05D008534 ORTHO05D002871 8.2e-20 102.4 136 35.3
Medtr3g045050 Medicago truncatula HOM05D009048 ORTHO05D002871 1.4e-19 101.7 180 31.1
Lj2g0008490 Lotus japonicus HOM05D004090 ORTHO05D002871 3.1e-19 100.5 175 33.1
VMungo1215G2993 Vigna mungo HOM05D004090 ORTHO05D002871 4.1e-19 100.1 144 38.2
VMungo0464G1097 Vigna mungo HOM05D004090 ORTHO05D002871 2.0e-18 97.8 141 36.9
Phvul.005G110250 Phaseolus vulgaris HOM05D004090 ORTHO05D002871 3.5e-18 97.1 250 29.2
VMungo1383G1095 Vigna mungo HOM05D004090 ORTHO05D002871 4.5e-18 96.7 133 37.6
arahy.Tifrunner.gnm1.ann1.7278N0 Arachis hypogaea HOM05D004090 ORTHO05D002871 3.8e-17 93.6 437 22.0
Medtr0034s0130 Medicago truncatula HOM05D020442 ORTHO05D002871 5.0e-17 93.2 135 40.0
VMungo0647G1512 Vigna mungo HOM05D008534 ORTHO05D002871 6.5e-17 92.8 110 40.0
TPR.G27824 Trifolium pratense HOM05D004090 ORTHO05D002871 8.5e-17 92.4 222 36.0
VMungo1383G2973 Vigna mungo HOM05D004090 ORTHO05D002871 3.2e-16 90.5 107 44.9
VMungo0540G1598 Vigna mungo HOM05D004090 ORTHO05D002871 5.5e-16 89.7 254 29.5
Medtr8g075655 Medicago truncatula HOM05D020442 ORTHO05D002871 6.1e-15 86.3 133 38.3
Medtr8g060470 Medicago truncatula HOM05D009048 ORTHO05D002871 1.0e-14 85.5 232 24.6
VMungo0251G0871 Vigna mungo HOM05D004090 ORTHO05D002871 4.0e-14 83.6 106 39.6
VMungo1383G2195 Vigna mungo HOM05D008534 ORTHO05D002871 4.0e-14 83.6 171 28.1
VMungo0647G0178 Vigna mungo HOM05D004090 ORTHO05D002871 6.8e-14 82.8 143 32.2
arahy.Tifrunner.gnm1.ann1.4EK815 Arachis hypogaea HOM05D004090 ORTHO05D002871 8.8e-14 82.4 210 31.4
Medtr0009s0150 Medicago truncatula HOM05D009048 ORTHO05D002871 7.5e-13 79.3 212 26.9
Medtr5g058300 Medicago truncatula HOM05D020442 ORTHO05D002871 1.7e-12 78.2 189 27.0
VMungo1127G0118 Vigna mungo HOM05D004090 ORTHO05D002871 1.7e-12 78.2 115 33.0
Medtr3g449650 Medicago truncatula HOM05D020442 ORTHO05D002871 3.7e-12 77.0 110 38.2
VMungo0647G2244 Vigna mungo HOM05D004090 ORTHO05D002871 3.7e-12 77.0 101 37.6
VMungo1383G0517 Vigna mungo HOM05D004090 ORTHO05D002871 3.7e-12 77.0 194 31.4
TPR.G21984 Trifolium pratense HOM05D025246 ORTHO05D002871 8.3e-12 75.9 109 38.5
VMungo0251G2188 Vigna mungo HOM05D008534 ORTHO05D002871 8.3e-12 75.9 169 27.8
VMungo0251G3211 Vigna mungo HOM05D004090 ORTHO05D002871 8.3e-12 75.9 204 27.0
VMungo0540G0125 Vigna mungo HOM05D004090 ORTHO05D002871 3.1e-11 73.9 124 32.3
VMungo0720G1324 Vigna mungo HOM05D006747 ORTHO05D008384 5.4e-11 73.2 82 39.0
VMungo0720G1840 Vigna mungo HOM05D004090 ORTHO05D002871 2.0e-10 71.2 171 28.1
VMungo1127G0450 Vigna mungo HOM05D004090 ORTHO05D002871 3.5e-10 70.5 162 28.4
VMungo0464G1201 Vigna mungo HOM05D004090 ORTHO05D002871 4.5e-10 70.1 96 39.6
VMungo0647G1954 Vigna mungo HOM05D004090 ORTHO05D002871 5.9e-10 69.7 384 22.9
VMungo0540G0038 Vigna mungo HOM05D004090 ORTHO05D002871 1.3e-09 68.6 70 48.6
VMungo1127G1587 Vigna mungo HOM05D004090 ORTHO05D002871 2.2e-09 67.8 103 32.0
VMungo0331G0934 Vigna mungo HOM05D004090 ORTHO05D002871 2.9e-09 67.4 69 47.8
VMungo0331G1552 Vigna mungo HOM05D004090 ORTHO05D002871 2.9e-09 67.4 106 33.0
VMungo0540G1798 Vigna mungo HOM05D004090 ORTHO05D002871 3.8e-09 67.0 69 49.3
Medtr1g040490 Medicago truncatula HOM05D009048 ORTHO05D002871 8.5e-09 65.9 83 39.8
Medtr6g055980 Medicago truncatula HOM05D009048 ORTHO05D002871 1.1e-08 65.5 79 40.5
VMungo0540G1865 Vigna mungo HOM05D004090 ORTHO05D002871 1.1e-08 65.5 83 37.3
VMungo1383G3738 Vigna mungo HOM05D004090 ORTHO05D002871 1.9e-08 64.7 99 30.3
Medtr1g051540 Medicago truncatula HOM05D009048 ORTHO05D002871 5.5e-08 63.2 164 29.3
Psat4g147040 Pisum sativum HOM05D007871 ORTHO05D010918 7.2e-08 62.8 66 47.0
VMungo0647G2204 Vigna mungo HOM05D004090 ORTHO05D002871 7.2e-08 62.8 53 50.9
VMungo1215G1008 Vigna mungo HOM05D004090 ORTHO05D002871 7.2e-08 62.8 80 35.0
Medtr6g465910 Medicago truncatula HOM05D020442 ORTHO05D002871 2.1e-07 61.2 119 36.1
Psat4g031320 Pisum sativum HOM05D009679 ORTHO05D012251 2.1e-07 61.2 163 23.3
CSS0040956 Camellia sinensis var. sinensis HOM05D035337 ORTHO05D000116 2.7e-07 60.8 136 29.4
VMungo0251G2275 Vigna mungo HOM05D004090 ORTHO05D002871 3.6e-07 60.5 68 47.1
VMungo0720G2425 Vigna mungo HOM05D004090 ORTHO05D002871 6.1e-07 59.7 119 32.8
Os06g0174800 Oryza sativa ssp. japonica HOM05D004287 ORTHO05D000116 2.3e-06 57.8 75 37.3
VMungo1383G0119 Vigna mungo HOM05D004090 ORTHO05D002871 3.0e-06 57.4 72 41.7
Medtr4g071080 Medicago truncatula HOM05D020442 ORTHO05D002871 4.0e-06 57.0 68 36.8
Medtr7g032790 Medicago truncatula HOM05D009048 ORTHO05D002871 4.0e-06 57.0 48 47.9
Os06g0165300 Oryza sativa ssp. japonica HOM05D004287 ORTHO05D000116 4.0e-06 57.0 95 32.6
Psat0s2694g0080 Pisum sativum HOM05D007871 ORTHO05D010918 4.0e-06 57.0 63 41.3
Psat7g251840 Pisum sativum HOM05D007871 ORTHO05D010918 5.2e-06 56.6 65 41.5


User provided reference genes

Program Settings