Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g038340 Medicago truncatula HOM05D000147 ORTHO05D004093 1.9e-144 515.8 249 100.0
Medtr1g081930 Medicago truncatula HOM05D000147 ORTHO05D004093 1.5e-24 117.5 85 62.4
TPR.G12197 Trifolium pratense HOM05D000147 ORTHO05D004093 2.6e-24 116.7 81 61.7
TPR.G26136 Trifolium pratense HOM05D000147 ORTHO05D001254 1.3e-23 114.4 89 57.3
TPR.G15289 Trifolium pratense HOM05D000147 ORTHO05D004093 1.7e-23 114.0 100 51.0
TPR.G397 Trifolium pratense HOM05D000147 ORTHO05D004093 9.1e-22 108.2 89 53.9
Medtr1g074090 Medicago truncatula HOM05D000147 ORTHO05D004093 2.6e-21 106.7 87 51.7
Medtr1g069475 Medicago truncatula HOM05D000147 ORTHO05D004093 5.0e-20 102.4 237 30.8
Medtr5g049680 Medicago truncatula HOM05D000147 ORTHO05D004093 8.5e-20 101.7 79 53.2
TPR.G18407 Trifolium pratense HOM05D000147 ORTHO05D004093 1.4e-19 100.9 79 55.7
TPR.G29999 Trifolium pratense HOM05D000147 ORTHO05D004093 2.5e-19 100.1 81 55.6
Medtr8g099580 Medicago truncatula HOM05D000147 ORTHO05D004093 4.2e-19 99.4 204 33.8
Medtr1g034430 Medicago truncatula HOM05D000147 ORTHO05D004093 5.5e-19 99.0 92 48.9
Medtr8g036780 Medicago truncatula HOM05D000147 ORTHO05D004093 5.5e-19 99.0 82 53.7
Medtr5g036320 Medicago truncatula HOM05D000147 ORTHO05D004093 2.1e-18 97.1 78 52.6
Medtr8g031800 Medicago truncatula HOM05D000147 ORTHO05D004093 2.7e-18 96.7 80 52.5
Medtr0015s0120 Medicago truncatula HOM05D000147 ORTHO05D004093 3.6e-18 96.3 72 56.9
Medtr6g016265 Medicago truncatula HOM05D000147 ORTHO05D004093 3.0e-17 93.2 79 49.4
Medtr6g453270 Medicago truncatula HOM05D000147 ORTHO05D004093 3.0e-17 93.2 80 50.0
Medtr5g034450 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-16 91.3 72 52.8
Medtr8g079540 Medicago truncatula HOM05D000147 ORTHO05D004093 2.6e-16 90.1 86 46.5
Medtr3g116210 Medicago truncatula HOM05D000147 ORTHO05D004093 5.7e-16 89.0 96 46.9
Psat5g258880 Pisum sativum HOM05D000147 ORTHO05D004093 2.8e-15 86.7 81 46.9
Medtr0002s1220 Medicago truncatula HOM05D000147 ORTHO05D004093 6.3e-15 85.5 90 42.2
Medtr5g083200 Medicago truncatula HOM05D000147 ORTHO05D004093 6.3e-15 85.5 90 42.2
Medtr6g089560 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-14 84.7 81 44.4
Medtr1g099430 Medicago truncatula HOM05D000147 ORTHO05D004093 2.4e-14 83.6 81 46.9
Medtr1g088650 Medicago truncatula HOM05D000147 ORTHO05D004093 3.1e-14 83.2 77 50.6
Medtr1g070820 Medicago truncatula HOM05D000147 ORTHO05D004093 4.1e-14 82.8 90 41.1
Medtr3g111390 Medicago truncatula HOM05D000147 ORTHO05D004093 4.1e-14 82.8 90 41.1
Medtr3g462490 Medicago truncatula HOM05D000327 ORTHO05D000218 4.1e-14 82.8 75 48.0
Medtr1g109000 Medicago truncatula HOM05D000147 ORTHO05D004093 5.3e-14 82.4 79 49.4
Medtr5g085210 Medicago truncatula HOM05D000147 ORTHO05D004093 2.6e-13 80.1 80 45.0
Medtr1g050488 Medicago truncatula HOM05D000147 ORTHO05D004093 3.5e-13 79.7 114 36.8
Medtr2g451430 Medicago truncatula HOM05D000147 ORTHO05D004093 3.5e-13 79.7 69 49.3
Medtr4g094272 Medicago truncatula HOM05D000147 ORTHO05D004093 3.5e-13 79.7 71 50.7
Medtr7g013520 Medicago truncatula HOM05D000147 ORTHO05D004093 5.9e-13 79.0 79 46.8
Medtr5g091440 Medicago truncatula HOM05D000147 ORTHO05D004093 7.7e-13 78.6 50 68.0
Medtr8g031080 Medicago truncatula HOM05D000147 ORTHO05D004093 7.7e-13 78.6 60 61.7
Medtr1g045340 Medicago truncatula HOM05D000147 ORTHO05D004093 1.0e-12 78.2 77 46.8
Medtr2g027020 Medicago truncatula HOM05D000147 ORTHO05D004093 1.3e-12 77.8 76 46.1
Medtr2g017550 Medicago truncatula HOM05D000147 ORTHO05D004093 2.2e-12 77.0 75 46.7
TPR.G11037 Trifolium pratense HOM05D000147 ORTHO05D004093 2.2e-12 77.0 55 60.0
Medtr4g046027 Medicago truncatula HOM05D000147 ORTHO05D004093 5.0e-12 75.9 61 57.4
Medtr7g063280 Medicago truncatula HOM05D000147 ORTHO05D004093 5.0e-12 75.9 190 29.5
Medtr6g046670 Medicago truncatula HOM05D000147 ORTHO05D004093 8.5e-12 75.1 77 46.8
Medtr1g017840 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-11 74.7 76 46.1
Medtr8g045330 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-11 74.7 69 47.8
Psat5g003480 Pisum sativum HOM05D000147 ORTHO05D004093 1.9e-11 73.9 80 41.2
Medtr1g054905 Medicago truncatula HOM05D000147 ORTHO05D004093 2.5e-11 73.6 65 49.2
Medtr1g087480 Medicago truncatula HOM05D000147 ORTHO05D004093 3.2e-11 73.2 196 30.1
Medtr4g046657 Medicago truncatula HOM05D000147 ORTHO05D004093 3.2e-11 73.2 54 64.8
Medtr6g016355 Medicago truncatula HOM05D000147 ORTHO05D004093 4.2e-11 72.8 74 43.2
Medtr3g064060 Medicago truncatula HOM05D000147 ORTHO05D004093 7.2e-11 72.0 45 62.2
Medtr4g094370 Medicago truncatula HOM05D000147 ORTHO05D004093 7.2e-11 72.0 71 46.5
Medtr5g068115 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-10 71.2 54 53.7
Medtr7g006380 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-10 71.2 55 56.4
Medtr8g088220 Medicago truncatula HOM05D000147 ORTHO05D004093 1.6e-10 70.9 48 64.6
Medtr5g037920 Medicago truncatula HOM05D000147 ORTHO05D004093 2.7e-10 70.1 127 34.6
Medtr4g035890 Medicago truncatula HOM05D000147 ORTHO05D004093 3.6e-10 69.7 57 56.1
TPR.G18397 Trifolium pratense HOM05D000147 ORTHO05D004093 3.6e-10 69.7 84 39.3
Medtr1g018300 Medicago truncatula HOM05D000147 ORTHO05D004093 4.7e-10 69.3 79 44.3
Medtr4g029360 Medicago truncatula HOM05D000147 ORTHO05D004093 6.1e-10 68.9 78 41.0
Psat6g221120 Pisum sativum HOM05D000147 ORTHO05D004093 6.1e-10 68.9 79 41.8
Medtr7g078610 Medicago truncatula HOM05D000147 ORTHO05D004093 8.0e-10 68.6 67 46.3
Nn1g08273 Nelumbo nucifera HOM05D000003 ORTHO05D000004 8.0e-10 68.6 89 39.3
Medtr4g008270 Medicago truncatula HOM05D000147 ORTHO05D004093 1.0e-09 68.2 57 50.9
Medtr8g059135 Medicago truncatula HOM05D000147 ORTHO05D004093 1.0e-09 68.2 68 45.6
Nn5g27257 Nelumbo nucifera HOM05D000003 ORTHO05D000004 1.8e-09 67.4 90 38.9
Medtr0093s0070 Medicago truncatula HOM05D000147 ORTHO05D004093 4.0e-09 66.2 55 52.7
Medtr1g022215 Medicago truncatula HOM05D000147 ORTHO05D004093 5.2e-09 65.9 69 44.9
Medtr8g022750 Medicago truncatula HOM05D000147 ORTHO05D004093 6.7e-09 65.5 81 38.3
Medtr2g059470 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-08 64.7 56 50.0
TPR.G14874 Trifolium pratense HOM05D000147 ORTHO05D004093 1.2e-08 64.7 81 39.5
Medtr7g053400 Medicago truncatula HOM05D000147 ORTHO05D004093 1.5e-08 64.3 52 53.8
Medtr4g073820 Medicago truncatula HOM05D000147 ORTHO05D004093 2.0e-08 63.9 52 59.6
Medtr1g074240 Medicago truncatula HOM05D000147 ORTHO05D004093 2.6e-08 63.5 56 50.0
TPR.G33654 Trifolium pratense HOM05D000147 ORTHO05D004093 4.4e-08 62.8 82 41.5
Medtr2g102247 Medicago truncatula HOM05D000147 ORTHO05D004093 5.7e-08 62.4 54 48.1
Medtr2g011830 Medicago truncatula HOM05D000147 ORTHO05D004093 9.7e-08 61.6 67 46.3
Medtr8g098925 Medicago truncatula HOM05D000147 ORTHO05D004093 9.7e-08 61.6 86 37.2
TPR.G14611 Trifolium pratense HOM05D011238 ORTHO05D004093 1.3e-07 61.2 88 35.2
Medtr5g075610 Medicago truncatula HOM05D000147 ORTHO05D004093 1.7e-07 60.8 52 51.9
Medtr6g045427 Medicago truncatula HOM05D000147 ORTHO05D004093 2.2e-07 60.5 79 40.5
PSO063G5501 Papaver somniferum HOM05D000003 ORTHO05D001026 2.2e-07 60.5 82 40.2
Medtr3g010950 Medicago truncatula HOM05D000147 ORTHO05D004093 2.8e-07 60.1 45 55.6
Medtr5g430460 Medicago truncatula HOM05D020004 ORTHO05D004093 2.8e-07 60.1 51 49.0
PSO675G8019 Papaver somniferum HOM05D003407 ORTHO05D001026 3.7e-07 59.7 79 40.5
Medtr2g047100 Medicago truncatula HOM05D000147 ORTHO05D004093 4.8e-07 59.3 50 52.0
Medtr4g023580 Medicago truncatula HOM05D000147 ORTHO05D004093 6.3e-07 58.9 67 43.3
Medtr5g080690 Medicago truncatula HOM05D000147 ORTHO05D004093 6.3e-07 58.9 60 46.7
Medtr6g034915 Medicago truncatula HOM05D000147 ORTHO05D004093 6.3e-07 58.9 102 31.4
Medtr6g033225 Medicago truncatula HOM05D000147 ORTHO05D004093 8.2e-07 58.5 72 38.9
Medtr8g069135 Medicago truncatula HOM05D000147 ORTHO05D004093 8.2e-07 58.5 44 52.3
Psat6g111160 Pisum sativum HOM05D000003 ORTHO05D000004 8.2e-07 58.5 45 53.3
Medtr0607s0040 Medicago truncatula HOM05D000003 ORTHO05D000004 1.1e-06 58.2 66 47.0
Medtr3g072290 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-06 58.2 42 61.9
Medtr4g006490 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-06 58.2 60 46.7
Lju470C9T6 Lonicera japonica HOM05D000003 ORTHO05D000167 1.4e-06 57.8 84 35.7
Medtr3g026270 Medicago truncatula HOM05D000147 ORTHO05D004093 1.4e-06 57.8 50 46.0
Medtr4g096920 Medicago truncatula HOM05D000147 ORTHO05D004093 1.4e-06 57.8 67 41.8
Medtr6g016135 Medicago truncatula HOM05D000147 ORTHO05D004093 1.4e-06 57.8 52 50.0
Glyma.18G106200 Glycine max HOM05D013398 ORTHO05D012877 4.1e-06 56.2 84 33.3
TPR.G3250 Trifolium pratense HOM05D011238 ORTHO05D004093 5.3e-06 55.8 77 33.8
CANSAT54G0904 Cannabis sativa HOM05D000003 ORTHO05D000167 7.0e-06 55.5 89 36.0
Medtr5g042170 Medicago truncatula HOM05D000147 ORTHO05D004093 7.0e-06 55.5 52 50.0
Psat2g148120 Pisum sativum HOM05D000003 ORTHO05D000004 7.0e-06 55.5 195 25.1
CANSAT01G1815 Cannabis sativa HOM05D000003 ORTHO05D000167 9.1e-06 55.1 89 34.8
Medtr5g038930 Medicago truncatula HOM05D007997 ORTHO05D010171 9.1e-06 55.1 45 53.3


User provided reference genes

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