Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g038125 Medicago truncatula HOM05D000725 ORTHO05D004053 1.2e-25 119.0 56 100.0
Medtr3g071860 Medicago truncatula HOM05D000725 ORTHO05D004053 6.4e-08 60.1 34 76.5
TPR.G30921 Trifolium pratense HOM05D000725 ORTHO05D004053 1.9e-07 58.5 34 70.6
Glyma.18G023900 Glycine max HOM05D000725 ORTHO05D004053 3.2e-07 57.8 37 67.6
Cc06_g20020 Coffea canephora HOM05D000725 ORTHO05D004053 5.4e-07 57.0 38 60.5
Phvul.001G246400 Phaseolus vulgaris HOM05D000725 ORTHO05D004053 5.4e-07 57.0 43 60.5
Psat5g144960 Pisum sativum HOM05D000725 ORTHO05D004053 7.0e-07 56.6 33 69.7
Ca_15161_v3 Cicer arietinum L. HOM05D000725 ORTHO05D004053 9.2e-07 56.2 40 60.0
Glyma.U027200 Glycine max HOM05D000725 ORTHO05D004053 1.2e-06 55.8 39 59.0
Lj1A961T79 Lonicera japonica HOM05D000725 ORTHO05D004053 1.6e-06 55.5 33 69.7
Glyma.02G261800 Glycine max HOM05D000725 ORTHO05D004053 2.7e-06 54.7 33 69.7
Medtr1g081750 Medicago truncatula HOM05D000725 ORTHO05D004053 4.6e-06 53.9 39 56.4
VMungo0647G1332 Vigna mungo HOM05D000725 ORTHO05D004053 4.6e-06 53.9 29 75.9
TPR.G18784 Trifolium pratense HOM05D000725 ORTHO05D004053 6.0e-06 53.5 33 63.6
Psat2g030640 Pisum sativum HOM05D000725 ORTHO05D004053 7.8e-06 53.1 38 57.9
TPR.G8343 Trifolium pratense HOM05D000725 ORTHO05D004053 7.8e-06 53.1 38 57.9


User provided reference genes

Program Settings