Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 4.3e-66 254.6 136 100.0
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 1.9e-53 212.6 125 91.2
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 1.3e-51 206.5 128 85.9
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 1.1e-50 203.4 131 84.0
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 2.4e-48 195.7 135 80.7
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 8.1e-41 170.6 135 72.6
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 3.1e-40 168.7 129 76.7
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 2.0e-39 166.0 140 70.0
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 3.4e-39 165.2 133 66.9
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 2.4e-37 159.1 135 65.9
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 3.2e-37 158.7 139 66.2
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 7.1e-37 157.5 139 65.5
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 1.1e-34 150.2 125 70.4
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 3.4e-31 138.7 114 71.9
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 7.6e-31 137.5 133 66.2
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 7.6e-31 137.5 134 62.7
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 1.3e-30 136.7 133 64.7
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 4.9e-30 134.8 110 71.8
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 1.1e-29 133.7 98 72.4
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 2.5e-29 132.5 132 59.1
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 4.2e-29 131.7 147 56.5
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 1.6e-28 129.8 95 70.5
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 6.0e-28 127.9 131 58.0
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 1.0e-27 127.1 131 58.8
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 1.8e-27 126.3 132 56.8
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 6.7e-27 124.4 132 58.3
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 6.7e-27 124.4 133 55.6
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 8.7e-27 124.0 96 66.7
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 1.1e-26 123.6 135 56.3
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 1.5e-26 123.2 130 62.3
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 2.5e-26 122.5 95 71.6
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 3.3e-26 122.1 144 57.6
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 4.3e-26 121.7 96 71.9
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 9.7e-26 120.6 131 58.0
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 2.2e-25 119.4 98 65.3
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 2.8e-25 119.0 92 65.2
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 3.7e-25 118.6 99 61.6
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 1.4e-24 116.7 143 52.4
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 5.3e-24 114.8 142 55.6
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 5.3e-24 114.8 152 50.7
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 6.9e-24 114.4 117 60.7
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 6.9e-24 114.4 138 54.3
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 9.0e-24 114.0 159 52.2
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 1.2e-23 113.6 153 54.9
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 1.2e-23 113.6 123 56.1
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 2.6e-23 112.5 141 54.6
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 2.6e-23 112.5 158 53.8
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 2.6e-23 112.5 143 48.3
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 5.9e-23 111.3 158 51.9
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 1.0e-22 110.5 131 55.7
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.0e-22 110.5 158 53.2
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 1.0e-22 110.5 139 53.2
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 1.7e-22 109.8 107 58.9
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 1.7e-22 109.8 107 58.9
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 3.8e-22 108.6 146 50.0
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 5.0e-22 108.2 132 56.1
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 5.0e-22 108.2 107 57.9
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 6.5e-22 107.8 107 57.9
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 6.5e-22 107.8 115 57.4
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 1.9e-21 106.3 135 53.3
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 1.9e-21 106.3 139 48.2
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 2.5e-21 105.9 136 50.7
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 7.2e-21 104.4 110 62.7
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 1.2e-20 103.6 111 60.4
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 2.3e-19 99.4 96 61.5
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 3.9e-19 98.6 118 56.8
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 6.7e-19 97.8 144 47.2
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 6.7e-19 97.8 141 51.1
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 1.9e-18 96.3 96 61.5
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 3.3e-18 95.5 129 50.4
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 8.2e-17 90.9 134 48.5
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 3.4e-15 85.5 117 44.4
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 4.5e-15 85.1 94 56.4
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 5.9e-15 84.7 94 56.4
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 1.0e-14 84.0 116 49.1
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 3.8e-14 82.0 94 55.3
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 3.8e-14 82.0 94 55.3
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 6.5e-14 81.3 126 48.4
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 8.5e-14 80.9 94 55.3
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 1.1e-13 80.5 129 48.8
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 3.2e-13 79.0 129 48.1
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 5.5e-13 78.2 190 37.9
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 5.5e-13 78.2 190 37.9
Thhalv10009537m.g Eutrema salsugineum HOM05D007629 ORTHO05D009511 3.6e-12 75.5 93 52.7
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 2.3e-11 72.8 93 48.4
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 3.0e-11 72.4 121 43.0
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 3.0e-11 72.4 93 51.6
CDE10G1066 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 3.0e-11 72.4 112 44.6
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 5.1e-11 71.6 105 45.7
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 6.7e-11 71.2 127 44.9
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 1.5e-10 70.1 121 44.6
AUR62023067 Chenopodium quinoa HOM05D007629 ORTHO05D009511 4.4e-10 68.6 139 40.3
CDE05G0903 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 5.7e-10 68.2 95 46.3
CDE05G1807 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 7.4e-10 67.8 114 42.1
BraA09t41945Z Brassica rapa HOM05D001466 ORTHO05D001452 9.7e-10 67.4 109 45.0
A09p66070 Brassica napus HOM05D001466 ORTHO05D001452 1.7e-09 66.6 110 44.5
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 5.3e-08 61.6 137 40.1
SEGI_12647 Sequoiadendron giganteum HOM05D057847 ORTHO05D009511 9.1e-08 60.8 104 37.5
SEGI_40980 Sequoiadendron giganteum HOM05D057847 ORTHO05D009511 9.1e-08 60.8 104 37.5
C08p50220 Brassica napus HOM05D001466 ORTHO05D001452 3.4e-07 58.9 108 41.7
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 5.9e-07 58.2 77 51.9
Ah.10g038830 Amaranthus hybridus HOM05D007629 ORTHO05D009511 8.5e-06 54.3 82 45.1


User provided reference genes

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