Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g032140 Medicago truncatula HOM05D001646 ORTHO05D010171 4.8e-123 444.5 225 100.0
Medtr2g436970 Medicago truncatula HOM05D001646 ORTHO05D001572 1.4e-29 134.0 87 80.5
Psat1g153200 Pisum sativum HOM05D001646 ORTHO05D001572 3.7e-14 82.8 86 54.7
Medtr2g436990 Medicago truncatula HOM05D007997 ORTHO05D010171 4.8e-14 82.4 49 77.6
MELO3C021344.2 Cucumis melo HOM05D001646 ORTHO05D001572 1.2e-09 67.8 93 45.2
Sed0020393 Sechium edule HOM05D001646 ORTHO05D001572 1.6e-09 67.4 93 45.2
CsaV3_6G017280 Cucumis sativus L. HOM05D001646 ORTHO05D001572 2.1e-09 67.0 93 44.1
MELO3C006655.2 Cucumis melo HOM05D001646 ORTHO05D001572 3.6e-09 66.2 93 44.1
CsaV3_3G014540 Cucumis sativus L. HOM05D001646 ORTHO05D001572 3.6e-09 66.2 93 44.1
ClCG05G006030 Citrullus lanatus HOM05D001646 ORTHO05D001572 8.0e-09 65.1 93 43.0
ClCG06G005240 Citrullus lanatus HOM05D001646 ORTHO05D001572 8.0e-09 65.1 93 44.1
TPR.G3191 Trifolium pratense HOM05D001646 ORTHO05D001572 4.0e-08 62.8 93 41.9
Dinv29772 Davidia involucrata HOM05D001646 ORTHO05D001572 6.7e-08 62.0 93 39.8
CSS0049585 Camellia sinensis var. sinensis HOM05D001646 ORTHO05D001572 8.8e-08 61.6 106 38.7
Potri.005G027300 Populus trichocarpa HOM05D001646 ORTHO05D001572 8.8e-08 61.6 90 41.1
Cpa.g.sc16.159 Carica papaya HOM05D001646 ORTHO05D001572 1.5e-07 60.8 93 40.9
Prupe.1G138300 Prunus persica HOM05D001646 ORTHO05D001572 1.5e-07 60.8 93 43.0
Sed0017245 Sechium edule HOM05D001646 ORTHO05D001572 1.5e-07 60.8 93 43.0
COL.COLO4_13893 Corchorus olitorius HOM05D001646 ORTHO05D001572 2.0e-07 60.5 93 40.9
Dinv33022 Davidia involucrata HOM05D001646 ORTHO05D001572 2.6e-07 60.1 91 40.7
MD13G1170000 Malus domestica HOM05D001646 ORTHO05D001572 2.6e-07 60.1 93 41.9
Dinv44392 Davidia involucrata HOM05D001646 ORTHO05D001572 3.3e-07 59.7 93 39.8
Psat3g023280 Pisum sativum HOM05D001646 ORTHO05D001572 3.3e-07 59.7 93 41.9
Sabra05G0032600 Salix brachista HOM05D001646 ORTHO05D001572 3.3e-07 59.7 90 40.0
Actinidia40267 Actinidia chinensis HOM05D001646 ORTHO05D001572 5.7e-07 58.9 93 39.8
Oeu037754.1 Olea europaea HOM05D001646 ORTHO05D001572 5.7e-07 58.9 93 41.9
Sed0025970 Sechium edule HOM05D001646 ORTHO05D001572 7.5e-07 58.5 93 41.9
Ciclev10003991m.g Citrus clementina HOM05D001646 ORTHO05D001572 9.7e-07 58.2 93 38.7
Haze_01226 Corylus avellana HOM05D001646 ORTHO05D001572 9.7e-07 58.2 93 43.0
Lj1A35T63 Lonicera japonica HOM05D001646 ORTHO05D001572 9.7e-07 58.2 94 42.6
Actinidia09162 Actinidia chinensis HOM05D001646 ORTHO05D001572 1.3e-06 57.8 87 37.9
Ca_14439_v3 Cicer arietinum L. HOM05D001646 ORTHO05D001572 1.3e-06 57.8 93 40.9
TWI09G0216 Tripterygium wilfordii HOM05D001646 ORTHO05D001572 1.3e-06 57.8 93 39.8
arahy.Tifrunner.gnm1.ann1.LLHC6G Arachis hypogaea HOM05D001646 ORTHO05D001572 1.7e-06 57.4 93 40.9
arahy.Tifrunner.gnm1.ann1.N634E9 Arachis hypogaea HOM05D001646 ORTHO05D001572 1.7e-06 57.4 93 40.9
Cc00_g10590 Coffea canephora HOM05D001646 ORTHO05D001572 1.7e-06 57.4 93 39.8
Lsat_1_v5_gn_5_49040 Lactuca sativa HOM05D001646 ORTHO05D001572 1.7e-06 57.4 93 35.5
Manes.03G193900 Manihot esculenta HOM05D001646 ORTHO05D001572 1.7e-06 57.4 93 39.8
Actinidia01471 Actinidia chinensis HOM05D001646 ORTHO05D001572 2.2e-06 57.0 93 38.7
Manes.05G065400 Manihot esculenta HOM05D001646 ORTHO05D001572 2.2e-06 57.0 93 37.6
Manes.15G013600 Manihot esculenta HOM05D001646 ORTHO05D001572 2.2e-06 57.0 93 39.8
QL06p008574 Quercus lobata HOM05D001646 ORTHO05D001572 2.2e-06 57.0 92 38.0
TPR.G31087 Trifolium pratense HOM05D019132 ORTHO05D010171 2.2e-06 57.0 97 36.1
CARHR143230 Cardamine hirsuta HOM05D001646 ORTHO05D001572 2.8e-06 56.6 87 40.2
Glyma.07G248800 Glycine max HOM05D001646 ORTHO05D001572 2.8e-06 56.6 93 39.8
Nitab4.5_0003749g0050 Nicotiana tabacum HOM05D001646 ORTHO05D001572 2.8e-06 56.6 91 40.7
Nitab4.5_0010156g0010 Nicotiana tabacum HOM05D001646 ORTHO05D001572 2.8e-06 56.6 91 40.7
Sabra13G0021700 Salix brachista HOM05D001646 ORTHO05D001572 2.8e-06 56.6 90 38.9
RcHm_v2.0_Chr4g0421961 Rosa chinensis HOM05D001646 ORTHO05D001572 3.7e-06 56.2 91 41.8
VMungo1215G1666 Vigna mungo HOM05D001646 ORTHO05D001572 3.7e-06 56.2 93 38.7
GSVIVG01010960001 Vitis vinifera HOM05D001646 ORTHO05D001572 3.7e-06 56.2 93 37.6
Actinidia32244 Actinidia chinensis HOM05D001646 ORTHO05D001572 4.8e-06 55.8 93 36.6
Ah.04g160410 Amaranthus hybridus HOM05D001646 ORTHO05D001572 4.8e-06 55.8 93 39.8
CiPaw.02G084000 Carya illinoinensis HOM05D001646 ORTHO05D001572 4.8e-06 55.8 93 41.9
Rhsim04G0220200 Rhododendron simsii HOM05D001646 ORTHO05D001572 4.8e-06 55.8 93 38.7
COL.COLO4_07995 Corchorus olitorius HOM05D001646 ORTHO05D001572 6.3e-06 55.5 93 37.6
Eucgr.H03895 Eucalyptus grandis HOM05D001646 ORTHO05D001572 6.3e-06 55.5 93 37.6
Gohir.D11G121300 Gossypium hirsutum HOM05D001646 ORTHO05D001572 6.3e-06 55.5 91 39.6
Gohir.D13G111300 Gossypium hirsutum HOM05D001646 ORTHO05D001572 6.3e-06 55.5 90 40.0
Phvul.003G104100 Phaseolus vulgaris HOM05D001646 ORTHO05D001572 6.3e-06 55.5 93 37.6
Sabra08G0154400 Salix brachista HOM05D001646 ORTHO05D001572 6.3e-06 55.5 89 41.6
Aqoxy5G00697 Aquilegia oxysepala HOM05D001646 ORTHO05D001572 8.2e-06 55.1 93 39.8
Duzib138G0943 Durio zibethinus HOM05D001646 ORTHO05D001572 8.2e-06 55.1 93 36.6
Gohir.A08G043200 Gossypium hirsutum HOM05D001646 ORTHO05D001572 8.2e-06 55.1 93 36.6
MD16G1171500 Malus domestica HOM05D001646 ORTHO05D001572 8.2e-06 55.1 93 40.9


User provided reference genes

Program Settings