Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g022850 Medicago truncatula HOM05D001538 ORTHO05D000007 4.1e-167 591.3 291 100.0
Medtr5g037520 Medicago truncatula HOM05D001538 ORTHO05D000007 4.3e-39 166.0 383 32.6
Medtr2g036980 Medicago truncatula HOM05D001538 ORTHO05D000007 1.5e-36 157.5 383 31.1
Medtr2g438650 Medicago truncatula HOM05D001538 ORTHO05D000007 1.6e-30 137.5 205 41.0
Medtr0012s0140 Medicago truncatula HOM05D001538 ORTHO05D000007 4.0e-29 132.9 210 36.7
TPR.G19027 Trifolium pratense HOM05D001538 ORTHO05D000007 6.4e-27 125.6 199 38.2
Medtr8g445450 Medicago truncatula HOM05D001538 ORTHO05D000007 1.1e-26 124.8 187 36.9
TPR.G23606 Trifolium pratense HOM05D001538 ORTHO05D000007 9.6e-23 111.7 147 41.5
TPR.G21617 Trifolium pratense HOM05D001538 ORTHO05D000007 1.3e-22 111.3 178 36.5
Medtr4g096760 Medicago truncatula HOM05D001538 ORTHO05D000007 1.4e-21 107.8 204 32.8
TPR.G16012 Trifolium pratense HOM05D001538 ORTHO05D000007 6.9e-21 105.5 184 34.8
Medtr0195s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 9.0e-21 105.1 214 29.9
TPR.G39433 Trifolium pratense HOM05D001538 ORTHO05D000007 1.2e-20 104.8 179 35.8
Medtr0195s0010 Medicago truncatula HOM05D001538 ORTHO05D000007 1.5e-20 104.4 184 32.1
Medtr6g045237 Medicago truncatula HOM05D001538 ORTHO05D000007 3.4e-20 103.2 189 33.9
TPR.G33855 Trifolium pratense HOM05D001538 ORTHO05D000007 3.4e-20 103.2 379 26.6
TPR.G27280 Trifolium pratense HOM05D001538 ORTHO05D000007 3.8e-19 99.8 179 34.6
Medtr3g086820 Medicago truncatula HOM05D001538 ORTHO05D000007 6.4e-19 99.0 375 25.3
Medtr2g068940 Medicago truncatula HOM05D041954 ORTHO05D000007 8.4e-19 98.6 109 47.7
Medtr4g035630 Medicago truncatula HOM05D001538 ORTHO05D000007 1.4e-18 97.8 219 35.2
Medtr4g093740 Medicago truncatula HOM05D001538 ORTHO05D000007 2.4e-18 97.1 185 31.9
Lalb_Chr13g0290751 Lupinus albus HOM05D000003 ORTHO05D000004 9.3e-18 95.1 132 37.9
TPR.G13832 Trifolium pratense HOM05D001538 ORTHO05D000007 1.6e-17 94.4 207 32.9
Medtr3g449600 Medicago truncatula HOM05D001538 ORTHO05D000007 4.6e-17 92.8 185 33.0
Medtr2g031910 Medicago truncatula HOM05D001538 ORTHO05D000007 2.3e-16 90.5 126 38.9
Medtr7g445700 Medicago truncatula HOM05D001538 ORTHO05D000007 2.3e-16 90.5 207 30.0
Lj9C305T8 Lonicera japonica HOM05D001538 ORTHO05D000007 3.0e-16 90.1 210 29.5
Medtr3g050340 Medicago truncatula HOM05D001538 ORTHO05D000007 6.7e-16 89.0 164 35.4
Medtr7g111460 Medicago truncatula HOM05D001538 ORTHO05D000007 2.5e-15 87.0 199 31.2
Medtr3g079805 Medicago truncatula HOM05D001538 ORTHO05D000007 4.3e-15 86.3 170 30.0
Medtr2g013990 Medicago truncatula HOM05D001538 ORTHO05D000007 7.4e-15 85.5 116 38.8
Medtr3g062250 Medicago truncatula HOM05D027863 ORTHO05D000007 7.4e-15 85.5 182 32.4
Medtr7g063160 Medicago truncatula HOM05D001538 ORTHO05D000007 9.6e-15 85.1 145 34.5
TPR.G14439 Trifolium pratense HOM05D000092 ORTHO05D000042 9.6e-15 85.1 165 32.7
TPR.G15063 Trifolium pratense HOM05D001538 ORTHO05D000007 1.6e-14 84.3 186 30.6
TPR.G7611 Trifolium pratense HOM05D001538 ORTHO05D000007 2.1e-14 84.0 145 36.6
Medtr4g031785 Medicago truncatula HOM05D001538 ORTHO05D000007 3.7e-14 83.2 109 38.5
Medtr8g045340 Medicago truncatula HOM05D001538 ORTHO05D000007 4.8e-14 82.8 159 30.8
Medtr8g104770 Medicago truncatula HOM05D001538 ORTHO05D000007 4.8e-14 82.8 204 29.9
FvH4_7g19511 Fragaria vesca HOM05D001538 ORTHO05D000007 6.2e-14 82.4 209 31.1
RcHm_v2.0_Chr3g0453631 Rosa chinensis HOM05D001538 ORTHO05D000007 6.2e-14 82.4 185 31.9
Psat3g128360 Pisum sativum HOM05D001538 ORTHO05D000007 1.1e-13 81.6 223 29.6
Medtr0488s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 1.8e-13 80.9 193 28.5
Medtr4g031410 Medicago truncatula HOM05D001538 ORTHO05D000007 3.1e-13 80.1 109 37.6
Medtr4g031755 Medicago truncatula HOM05D001538 ORTHO05D000007 3.1e-13 80.1 109 37.6
Medtr6g471850 Medicago truncatula HOM05D001538 ORTHO05D000007 3.1e-13 80.1 189 31.2
TPR.G2656 Trifolium pratense HOM05D001538 ORTHO05D000007 4.0e-13 79.7 150 36.0
FvH4_2g26101 Fragaria vesca HOM05D001538 ORTHO05D000007 5.3e-13 79.3 182 30.8
Medtr6g022050 Medicago truncatula HOM05D001538 ORTHO05D000007 6.9e-13 79.0 184 27.2
TPR.G15478 Trifolium pratense HOM05D001538 ORTHO05D000007 6.9e-13 79.0 109 37.6
TPR.G32743 Trifolium pratense HOM05D001538 ORTHO05D000007 9.0e-13 78.6 183 31.7
Medtr2g048290 Medicago truncatula HOM05D001538 ORTHO05D000007 1.2e-12 78.2 167 30.5
TPR.G21276 Trifolium pratense HOM05D001538 ORTHO05D000007 1.2e-12 78.2 126 34.9
Lj4A836T53 Lonicera japonica HOM05D001538 ORTHO05D000007 1.5e-12 77.8 208 29.8
TPR.G28466 Trifolium pratense HOM05D001538 ORTHO05D000007 2.0e-12 77.4 177 33.3
Phvul.009G187600 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 2.6e-12 77.0 171 32.2
TPR.G16991 Trifolium pratense HOM05D001538 ORTHO05D000007 2.6e-12 77.0 153 32.0
TPR.G39675 Trifolium pratense HOM05D001538 ORTHO05D000007 5.8e-12 75.9 187 29.4
FvH4_3g06911 Fragaria vesca HOM05D001538 ORTHO05D000007 7.6e-12 75.5 192 28.6
Psat7g029600 Pisum sativum HOM05D001538 ORTHO05D000007 7.6e-12 75.5 175 30.9
Medtr2g032880 Medicago truncatula HOM05D001538 ORTHO05D000007 1.0e-11 75.1 187 28.9
PSO675G8250 Papaver somniferum HOM05D001538 ORTHO05D000007 1.3e-11 74.7 146 35.6
Psat4g039840 Pisum sativum HOM05D001538 ORTHO05D000007 1.3e-11 74.7 180 33.9
Medtr4g045863 Medicago truncatula HOM05D001538 ORTHO05D000007 1.7e-11 74.3 134 35.1
Phvul.001G068900 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 1.7e-11 74.3 187 28.3
Psat4g055000 Pisum sativum HOM05D001538 ORTHO05D000007 1.7e-11 74.3 254 25.6
Lalb_Chr07g0194691 Lupinus albus HOM05D001538 ORTHO05D000007 2.2e-11 73.9 121 35.5
Medtr3g091430 Medicago truncatula HOM05D001538 ORTHO05D000007 2.9e-11 73.6 191 29.8
Aqoxy4G00128 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 3.8e-11 73.2 188 26.6
Medtr8g466790 Medicago truncatula HOM05D001538 ORTHO05D000007 3.8e-11 73.2 185 28.6
Aqoxy2G00535 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 4.9e-11 72.8 190 27.4
Aqoxy2G01417 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 4.9e-11 72.8 129 34.9
FvH4_4g05601 Fragaria vesca HOM05D001538 ORTHO05D000007 4.9e-11 72.8 188 27.7
Lju427A2T11 Lonicera japonica HOM05D001538 ORTHO05D000007 4.9e-11 72.8 172 31.4
Aqoxy4G02901 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 6.5e-11 72.4 179 26.3
Medtr3g464250 Medicago truncatula HOM05D001538 ORTHO05D000007 6.5e-11 72.4 135 31.9
TPR.G19697 Trifolium pratense HOM05D001538 ORTHO05D004353 6.5e-11 72.4 183 31.1
TPR.G35977 Trifolium pratense HOM05D001538 ORTHO05D000007 6.5e-11 72.4 112 36.6
Medtr7g006745 Medicago truncatula HOM05D001538 ORTHO05D000007 8.4e-11 72.0 100 40.0
TPR.G25770 Trifolium pratense HOM05D001538 ORTHO05D000007 8.4e-11 72.0 147 32.7
Lj7P482T20 Lonicera japonica HOM05D001538 ORTHO05D000007 1.1e-10 71.6 186 31.7
Medtr8g104170 Medicago truncatula HOM05D001538 ORTHO05D000007 1.1e-10 71.6 152 34.9
TPR.G18365 Trifolium pratense HOM05D001538 ORTHO05D000007 1.1e-10 71.6 108 37.0
Aqoxy2G01513 Aquilegia oxysepala HOM05D000024 ORTHO05D000007 1.9e-10 70.9 185 28.6
Medtr2g064630 Medicago truncatula HOM05D001538 ORTHO05D000007 2.5e-10 70.5 115 34.8
Medtr1024s0010 Medicago truncatula HOM05D001538 ORTHO05D000007 3.2e-10 70.1 126 33.3
Medtr5g046930 Medicago truncatula HOM05D001538 ORTHO05D000007 3.2e-10 70.1 139 33.8
Phvul.001G160900 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 3.2e-10 70.1 151 33.8
Medtr1g093780 Medicago truncatula HOM05D001538 ORTHO05D000007 5.5e-10 69.3 171 30.4
Medtr7g013110 Medicago truncatula HOM05D016686 ORTHO05D000007 5.5e-10 69.3 102 33.3
Phvul.002G232500 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 5.5e-10 69.3 113 35.4
Aqoxy5G03703 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 7.1e-10 68.9 179 27.9
Lalb_Chr10g0106351 Lupinus albus HOM05D001538 ORTHO05D000007 7.1e-10 68.9 123 32.5
Medtr0014s0120 Medicago truncatula HOM05D001538 ORTHO05D000007 7.1e-10 68.9 163 31.3
Lj3P676T23 Lonicera japonica HOM05D001538 ORTHO05D000007 9.3e-10 68.6 181 27.1
PSO541G3845 Papaver somniferum HOM05D001538 ORTHO05D000007 1.2e-09 68.2 132 34.1
Medtr1g041005 Medicago truncatula HOM05D001538 ORTHO05D000007 1.6e-09 67.8 120 32.5
Medtr8g040870 Medicago truncatula HOM05D001538 ORTHO05D000007 2.1e-09 67.4 89 41.6
Aqoxy4G00948 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 2.7e-09 67.0 199 26.1
FvH4_2g03281 Fragaria vesca HOM05D001538 ORTHO05D000007 3.5e-09 66.6 212 27.8
Lj2A1219T39 Lonicera japonica HOM05D001538 ORTHO05D000007 3.5e-09 66.6 185 30.3
Medtr5g048840 Medicago truncatula HOM05D001538 ORTHO05D000007 3.5e-09 66.6 155 29.0
Aqoxy3G02984 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 4.6e-09 66.2 191 26.2
Lj8C744T6 Lonicera japonica HOM05D001538 ORTHO05D000007 4.6e-09 66.2 184 27.2
Medtr1g062320 Medicago truncatula HOM05D001538 ORTHO05D000007 4.6e-09 66.2 118 33.9
FvH4_7g13962 Fragaria vesca HOM05D001538 ORTHO05D000007 6.0e-09 65.9 187 27.3
Medtr0098s0100 Medicago truncatula HOM05D001538 ORTHO05D000007 1.0e-08 65.1 185 29.2
Medtr4g108010 Medicago truncatula HOM05D001538 ORTHO05D000007 1.0e-08 65.1 117 32.5
Lj9C692G13 Lonicera japonica HOM05D001538 ORTHO05D000007 1.3e-08 64.7 185 30.3
Medtr1g040935 Medicago truncatula HOM05D001538 ORTHO05D000007 1.3e-08 64.7 120 31.7
Medtr1g090997 Medicago truncatula HOM05D001538 ORTHO05D000007 1.3e-08 64.7 106 33.0
Phvul.004G102300 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 1.3e-08 64.7 107 32.7
Lj8C741T17 Lonicera japonica HOM05D001538 ORTHO05D000007 1.8e-08 64.3 185 30.3
Medtr2g034230 Medicago truncatula HOM05D001538 ORTHO05D000007 1.8e-08 64.3 105 36.2
Medtr2g038110 Medicago truncatula HOM05D001538 ORTHO05D000007 1.8e-08 64.3 40 75.0
Psat3g124560 Pisum sativum HOM05D001538 ORTHO05D000007 1.8e-08 64.3 146 31.5
TPR.G39566 Trifolium pratense HOM05D001538 ORTHO05D000007 1.8e-08 64.3 126 34.9
Medtr1g063810 Medicago truncatula HOM05D001538 ORTHO05D000007 2.3e-08 63.9 98 32.7
Medtr6g043680 Medicago truncatula HOM05D001538 ORTHO05D000007 3.0e-08 63.5 119 31.1
Phvul.004G102400 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 3.0e-08 63.5 105 33.3
TPR.G40148 Trifolium pratense HOM05D001538 ORTHO05D000007 3.0e-08 63.5 94 36.2
Aqoxy5G00984 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 3.9e-08 63.2 186 26.3
TPR.G38827 Trifolium pratense HOM05D001538 ORTHO05D000007 3.9e-08 63.2 50 56.0
Aqoxy5G01605 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.1e-08 62.8 128 28.9
Medtr0566s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 6.7e-08 62.4 116 32.8
Medtr5g060840 Medicago truncatula HOM05D001538 ORTHO05D000007 6.7e-08 62.4 93 31.2
Medtr5g460950 Medicago truncatula HOM05D001538 ORTHO05D000007 6.7e-08 62.4 93 31.2
TPR.G24447 Trifolium pratense HOM05D000003 ORTHO05D000006 6.7e-08 62.4 91 37.4
TPR.G21298 Trifolium pratense HOM05D001538 ORTHO05D000007 8.7e-08 62.0 174 30.5
Aqoxy1G01858 Aquilegia oxysepala HOM05D000072 ORTHO05D000026 1.5e-07 61.2 212 26.4
Medtr5g065660 Medicago truncatula HOM05D001538 ORTHO05D000007 1.5e-07 61.2 117 34.2
Lalb_Chr13g0303791 Lupinus albus HOM05D001538 ORTHO05D000007 1.9e-07 60.8 106 35.8
Medtr4g031470 Medicago truncatula HOM05D001538 ORTHO05D000007 1.9e-07 60.8 57 50.9
PSO063G6686 Papaver somniferum HOM05D002145 ORTHO05D000007 1.9e-07 60.8 132 30.3
FvH4_1g13572 Fragaria vesca HOM05D001538 ORTHO05D000007 2.5e-07 60.5 192 25.5
Lalb_Chr09g0334161 Lupinus albus HOM05D001538 ORTHO05D000007 2.5e-07 60.5 97 36.1
Medtr6g061130 Medicago truncatula HOM05D001538 ORTHO05D000007 3.3e-07 60.1 167 26.3
Medtr8g061220 Medicago truncatula HOM05D001538 ORTHO05D000007 3.3e-07 60.1 48 58.3
PSO761G0353 Papaver somniferum HOM05D001538 ORTHO05D000007 4.3e-07 59.7 136 32.4
Aqoxy2G02235 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 7.4e-07 58.9 188 25.5
Lalb_Chr02g0151671 Lupinus albus HOM05D001538 ORTHO05D000007 7.4e-07 58.9 94 34.0
Medtr1g033070 Medicago truncatula HOM05D001538 ORTHO05D000007 7.4e-07 58.9 94 35.1
PSO013G0077 Papaver somniferum HOM05D002145 ORTHO05D000007 7.4e-07 58.9 132 29.5
Medtr5g085370 Medicago truncatula HOM05D001538 ORTHO05D000007 9.6e-07 58.5 208 28.4
Psat3g169080 Pisum sativum HOM05D001538 ORTHO05D000007 9.6e-07 58.5 52 53.8
Aqoxy5G03278 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 1.3e-06 58.2 197 27.4
Aqoxy7G02800 Aquilegia oxysepala HOM05D000024 ORTHO05D000007 1.3e-06 58.2 184 25.0
TPR.G27799 Trifolium pratense HOM05D001538 ORTHO05D000007 1.3e-06 58.2 97 35.1
Lj4A924T29 Lonicera japonica HOM05D001538 ORTHO05D000007 2.1e-06 57.4 142 31.0
Lju551C2T3 Lonicera japonica HOM05D001538 ORTHO05D000007 2.1e-06 57.4 130 30.0
FvH4_4g08213 Fragaria vesca HOM05D001538 ORTHO05D000007 2.8e-06 57.0 201 26.4
PSO017G2083 Papaver somniferum HOM05D002145 ORTHO05D000007 2.8e-06 57.0 132 28.8
Medtr3g071850 Medicago truncatula HOM05D000051 ORTHO05D000015 3.7e-06 56.6 87 33.3
Medtr7g056053 Medicago truncatula HOM05D001538 ORTHO05D000007 3.7e-06 56.6 50 52.0
PSO339G1580 Papaver somniferum HOM05D002145 ORTHO05D000007 4.8e-06 56.2 185 25.4
Psat7g193320 Pisum sativum HOM05D001538 ORTHO05D000007 4.8e-06 56.2 144 27.8
TPR.G27792 Trifolium pratense HOM05D001538 ORTHO05D000007 4.8e-06 56.2 90 35.6
TPR.G36504 Trifolium pratense HOM05D000250 ORTHO05D000007 4.8e-06 56.2 51 49.0
Lju1953C0G19 Lonicera japonica HOM05D001538 ORTHO05D000007 6.2e-06 55.8 173 28.3
Medtr4g033300 Medicago truncatula HOM05D001538 ORTHO05D000007 6.2e-06 55.8 48 52.1
Medtr5g079060 Medicago truncatula HOM05D001538 ORTHO05D000007 6.2e-06 55.8 98 33.7
Phvul.004G102200 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 6.2e-06 55.8 105 32.4
Medtr5g024590 Medicago truncatula HOM05D001538 ORTHO05D000007 8.2e-06 55.5 117 33.3
TPR.G39587 Trifolium pratense HOM05D001538 ORTHO05D000007 8.2e-06 55.5 42 52.4
TPR.G977 Trifolium pratense HOM05D001538 ORTHO05D016346 8.2e-06 55.5 53 54.7


User provided reference genes

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