Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g019720 Medicago truncatula HOM05D000005 ORTHO05D267240 6.2e-28 126.7 63 100.0
TPR.G18459 Trifolium pratense HOM05D000005 ORTHO05D000012 2.8e-12 74.7 59 71.2
TPR.G34320 Trifolium pratense HOM05D000005 ORTHO05D000012 1.1e-11 72.8 60 71.7
Glyma.16G006400 Glycine max HOM05D000005 ORTHO05D000012 9.1e-11 69.7 54 66.7
Medtr8g020280 Medicago truncatula HOM05D000005 ORTHO05D030163 2.6e-10 68.2 60 68.3
TPR.G18460 Trifolium pratense HOM05D000005 ORTHO05D030163 2.6e-10 68.2 61 63.9
TPR.G34302 Trifolium pratense HOM05D000544 ORTHO05D030163 2.6e-10 68.2 61 60.7
Medtr8g020230 Medicago truncatula HOM05D000005 ORTHO05D030163 1.3e-09 65.9 60 66.7
Glyma.07G037000 Glycine max HOM05D000005 ORTHO05D000012 5.0e-09 63.9 54 63.0
Phvul.010G132200 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 1.9e-08 62.0 56 58.9
TPR.G32496 Trifolium pratense HOM05D000005 ORTHO05D000012 1.9e-08 62.0 62 62.9
VMungo0331G0588 Vigna mungo HOM05D000005 ORTHO05D000012 3.2e-08 61.2 54 59.3
arahy.Tifrunner.gnm1.ann1.0DZS3V Arachis hypogaea HOM05D000005 ORTHO05D000012 7.2e-08 60.1 56 64.3
arahy.Tifrunner.gnm1.ann1.P0A6GX Arachis hypogaea HOM05D000005 ORTHO05D000012 7.2e-08 60.1 56 64.3
Medtr8g020300 Medicago truncatula HOM05D000005 ORTHO05D000012 9.4e-08 59.7 60 63.3
arahy.Tifrunner.gnm1.ann1.HII4GC Arachis hypogaea HOM05D000005 ORTHO05D000012 2.1e-07 58.5 56 51.8
arahy.Tifrunner.gnm1.ann1.UL31X6 Arachis hypogaea HOM05D000005 ORTHO05D000294 2.7e-07 58.2 41 61.0
Ca_30920_v3 Cicer arietinum L. HOM05D000005 ORTHO05D000012 3.6e-07 57.8 57 57.9
arahy.Tifrunner.gnm1.ann1.QP8IW7 Arachis hypogaea HOM05D000005 ORTHO05D000012 1.8e-06 55.5 56 48.2
Glyma.15G024800 Glycine max HOM05D000005 ORTHO05D000012 1.8e-06 55.5 59 47.5
Medtr8g020290 Medicago truncatula HOM05D000005 ORTHO05D000012 1.8e-06 55.5 56 51.8
TPR.G32474 Trifolium pratense HOM05D000005 ORTHO05D000012 2.3e-06 55.1 54 55.6
Medtr8g020360 Medicago truncatula HOM05D000005 ORTHO05D000012 3.0e-06 54.7 56 50.0
Phvul.010G131650 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 3.0e-06 54.7 54 55.6
Lj3g0010719 Lotus japonicus HOM05D000005 ORTHO05D000012 3.9e-06 54.3 59 47.5
Medtr4g014340 Medicago truncatula HOM05D000005 ORTHO05D000012 3.9e-06 54.3 57 45.6
Lalb_Chr22g0351831 Lupinus albus HOM05D000005 ORTHO05D000012 5.1e-06 53.9 57 50.9
Medtr4g014320 Medicago truncatula HOM05D000005 ORTHO05D000012 5.1e-06 53.9 53 47.2
Medtr8g019740 Medicago truncatula HOM05D000005 ORTHO05D000012 5.1e-06 53.9 52 57.7
TPR.G5222 Trifolium pratense HOM05D000005 ORTHO05D000012 5.1e-06 53.9 54 46.3
Lj3g0016799 Lotus japonicus HOM05D000005 ORTHO05D000012 6.7e-06 53.5 52 48.1
arahy.Tifrunner.gnm1.ann1.HCJ3IA Arachis hypogaea HOM05D000005 ORTHO05D000012 8.8e-06 53.1 46 58.7
Medtr4g014240 Medicago truncatula HOM05D000005 ORTHO05D000012 8.8e-06 53.1 53 47.2


User provided reference genes

Program Settings