Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g014610 Medicago truncatula HOM05D006568 ORTHO05D258972 0.0e+00 1147.9 620 100.0
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 5.6e-20 103.6 66 83.3
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 1.4e-18 99.0 66 75.8
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 1.3e-16 92.4 60 78.3
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 1.5e-12 79.0 66 66.7
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 4.3e-12 77.4 66 60.6
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 2.8e-11 74.7 109 43.1
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 2.8e-11 74.7 66 59.1
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 3.6e-11 74.3 66 59.1
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 6.2e-11 73.6 66 56.1
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 3.1e-10 71.2 86 46.5
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 6.8e-10 70.1 66 57.6
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 8.9e-10 69.7 102 49.0
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 2.6e-09 68.2 66 53.0
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 4.4e-09 67.4 68 60.3
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 4.4e-09 67.4 66 53.0
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 5.8e-09 67.0 67 55.2
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 5.8e-09 67.0 66 51.5
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 7.5e-09 66.6 69 56.5
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 7.5e-09 66.6 69 56.5
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 7.5e-09 66.6 69 56.5
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 7.5e-09 66.6 69 56.5
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 3.7e-08 64.3 106 40.6
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 4.9e-08 63.9 121 35.5
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 8.3e-08 63.2 63 52.4
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 8.3e-08 63.2 67 53.7
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 1.9e-07 62.0 67 53.7
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 1.9e-07 62.0 66 50.0
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 2.4e-07 61.6 67 52.2
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 3.2e-07 61.2 68 51.5
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 3.2e-07 61.2 135 33.3
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 3.2e-07 61.2 66 51.5
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 4.1e-07 60.8 67 53.7
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 5.4e-07 60.5 103 40.8
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 7.1e-07 60.1 67 49.3
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 7.1e-07 60.1 69 55.1
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 7.1e-07 60.1 71 53.5
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 9.2e-07 59.7 66 51.5
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 9.2e-07 59.7 77 45.5
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 1.2e-06 59.3 68 52.9
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 1.6e-06 58.9 104 40.4
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 1.6e-06 58.9 72 52.8
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 2.1e-06 58.5 66 48.5
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 2.1e-06 58.5 66 51.5
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 2.7e-06 58.2 66 48.5
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 3.5e-06 57.8 66 50.0
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 3.5e-06 57.8 67 47.8
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 7.8e-06 56.6 66 50.0


User provided reference genes

Program Settings