Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g013040 Medicago truncatula HOM05D007399 ORTHO05D009341 5.5e-119 431.0 225 100.0
TPR.G17137 Trifolium pratense HOM05D007399 ORTHO05D009341 8.6e-88 327.4 221 78.7
Psat4g199960 Pisum sativum HOM05D007399 ORTHO05D009341 2.7e-81 305.8 221 73.3
Phvul.010G020400 Phaseolus vulgaris HOM05D007399 ORTHO05D009341 1.4e-66 256.9 228 63.2
Glyma.16G101000 Glycine max HOM05D007399 ORTHO05D009341 1.6e-57 226.9 225 56.9
VMungo0331G1622 Vigna mungo HOM05D007399 ORTHO05D009341 6.0e-57 224.9 225 58.2
Lj3g0000647 Lotus japonicus HOM05D007399 ORTHO05D009341 8.1e-54 214.5 224 58.5
Lalb_Chr12g0209951 Lupinus albus HOM05D007399 ORTHO05D009341 5.3e-53 211.8 195 63.6
arahy.Tifrunner.gnm1.ann1.5JJB2W Arachis hypogaea HOM05D007399 ORTHO05D009341 1.3e-48 197.2 267 49.1
QL09p052198 Quercus lobata HOM05D007399 ORTHO05D009341 3.3e-47 192.6 221 51.6
Manes.13G046300 Manihot esculenta HOM05D007399 ORTHO05D009341 1.4e-45 187.2 224 51.8
arahy.Tifrunner.gnm1.ann1.YE6SLX Arachis hypogaea HOM05D007399 ORTHO05D009341 4.0e-45 185.7 236 52.5
Cfa002599 Carpinus fangiana HOM05D007399 ORTHO05D009341 1.2e-41 174.1 216 49.5
Thecc.01G222700 Theobroma cacao HOM05D007399 ORTHO05D009341 2.7e-41 172.9 238 46.6
Ciclev10022115m.g Citrus clementina HOM05D007399 ORTHO05D009341 3.9e-40 169.1 227 48.5
Cc01_g16850 Coffea canephora HOM05D007399 ORTHO05D009341 7.4e-39 164.9 233 45.5
Haze_24850 Corylus avellana HOM05D007399 ORTHO05D009341 9.6e-39 164.5 171 56.1
Nitab4.5_0000045g0320 Nicotiana tabacum HOM05D007399 ORTHO05D009341 3.7e-38 162.5 218 45.4
Dinv19187 Davidia involucrata HOM05D007399 ORTHO05D009341 8.2e-38 161.4 229 45.9
Prupe.8G200700 Prunus persica HOM05D007399 ORTHO05D009341 2.4e-37 159.8 223 47.1
Peaxi162Scf00398g00810 Petunia axillaris HOM05D007399 ORTHO05D009341 1.2e-36 157.5 213 43.7
RcHm_v2.0_Chr6g0284361 Rosa chinensis HOM05D007399 ORTHO05D009341 1.0e-35 154.5 228 44.3
Nitab4.5_0000345g0070 Nicotiana tabacum HOM05D007399 ORTHO05D009341 2.9e-35 152.9 212 43.9
FvH4_2g18740 Fragaria vesca HOM05D007399 ORTHO05D009341 3.8e-35 152.5 228 44.3
Aa31LG5G17710 Aethionema arabicum HOM05D007399 ORTHO05D009341 5.0e-35 152.1 236 43.2
AT3G07150 Arabidopsis thaliana HOM05D007399 ORTHO05D009341 8.4e-35 151.4 218 46.8
QL09p053453 Quercus lobata HOM05D007399 ORTHO05D009341 2.5e-34 149.8 226 42.9
Gohir.A11G139200 Gossypium hirsutum HOM05D007399 ORTHO05D009341 3.2e-34 149.4 240 42.1
FAN15G3119 Fragaria x ananassa HOM05D007399 ORTHO05D009341 4.2e-34 149.1 227 44.5
BraA05t22833Z Brassica rapa HOM05D007399 ORTHO05D009341 9.3e-34 147.9 218 43.6
PGR083G1511 Punica granatum HOM05D007399 ORTHO05D009341 1.2e-33 147.5 217 46.1
BcaC05g29843 Brassica carinata HOM05D007399 ORTHO05D009341 1.6e-33 147.1 217 43.3
FAN27G2185 Fragaria x ananassa HOM05D007399 ORTHO05D009341 2.1e-33 146.7 224 44.2
A05p41060 Brassica napus HOM05D007399 ORTHO05D009341 2.7e-33 146.4 218 43.1
AL3G18400 Arabidopsis lyrata HOM05D007399 ORTHO05D009341 4.6e-33 145.6 218 46.3
C05p60230 Brassica napus HOM05D007399 ORTHO05D009341 6.1e-33 145.2 218 43.1
Carub.0003s0667 Capsella rubella HOM05D007399 ORTHO05D009341 1.0e-32 144.4 217 46.1
Gohir.D11G145400 Gossypium hirsutum HOM05D007399 ORTHO05D009341 1.0e-32 144.4 235 41.3
ECA248G2789 Erigeron canadensis HOM05D007399 ORTHO05D009341 1.3e-32 144.1 219 42.9
TWI18G0746 Tripterygium wilfordii HOM05D007399 ORTHO05D009341 1.8e-32 143.7 222 44.1
BolC5t34673H Brassica oleracea HOM05D007399 ORTHO05D009341 2.3e-32 143.3 218 42.7
MD05G1173200 Malus domestica HOM05D007399 ORTHO05D009341 1.1e-31 141.0 223 44.4
Eucgr.H00781 Eucalyptus grandis HOM05D007399 ORTHO05D009341 1.5e-31 140.6 214 42.5
Duzib133G1013 Durio zibethinus HOM05D007399 ORTHO05D009341 1.9e-31 140.2 215 43.3
HanXRQChr01g0015211 Helianthus annuus HOM05D007399 ORTHO05D009341 2.5e-31 139.8 218 41.3
BcaC05g29751 Brassica carinata HOM05D007399 ORTHO05D009341 4.3e-31 139.0 220 42.3
Hund05568 Selenicereus undatus HOM05D007399 ORTHO05D009341 5.7e-31 138.7 224 40.2
TAR362G0473 Trochodendron aralioides HOM05D007399 ORTHO05D009341 9.7e-31 137.9 218 42.7
CAN.G3.2 Capsicum annuum HOM05D007399 ORTHO05D009341 1.3e-30 137.5 215 44.2
Lj2A1128G40 Lonicera japonica HOM05D007399 ORTHO05D009341 1.6e-30 137.1 199 41.7
CiPaw.03G147600 Carya illinoinensis HOM05D007399 ORTHO05D009341 2.8e-30 136.3 171 50.3
MELO3C021053.2 Cucumis melo HOM05D007399 ORTHO05D009341 2.8e-30 136.3 233 45.5
Gorai.007G155900 Gossypium raimondii HOM05D007399 ORTHO05D009341 4.8e-30 135.6 244 41.0
FAN24G1833 Fragaria x ananassa HOM05D007399 ORTHO05D009341 8.2e-30 134.8 228 42.1
COL.COLO4_15647 Corchorus olitorius HOM05D007399 ORTHO05D009341 1.8e-29 133.7 236 43.2
THA.LOC104802666 Tarenaya hassleriana HOM05D007399 ORTHO05D009341 1.8e-29 133.7 228 43.0
PSO170G3887 Papaver somniferum HOM05D007399 ORTHO05D009341 2.4e-29 133.3 245 40.8
QL09p053062 Quercus lobata HOM05D007399 ORTHO05D009341 2.4e-29 133.3 146 50.7
Migut.D02494 Erythranthe guttata HOM05D007399 ORTHO05D009341 3.1e-29 132.9 226 40.7
Lsat_1_v5_gn_5_180581 Lactuca sativa HOM05D007399 ORTHO05D009341 3.1e-29 132.9 216 41.2
Thhalv10022223m.g Eutrema salsugineum HOM05D007399 ORTHO05D009341 4.1e-29 132.5 192 44.3
CsaV3_7G026010 Cucumis sativus L. HOM05D007399 ORTHO05D009341 1.2e-28 131.0 235 43.0
Sp3g06090 Schrenkiella parvula HOM05D007399 ORTHO05D009341 1.2e-28 131.0 217 42.9
GSVIVG01003279001 Vitis vinifera HOM05D007399 ORTHO05D009341 1.2e-28 131.0 248 39.9
Sabra02G0185900 Salix brachista HOM05D007399 ORTHO05D009341 7.7e-28 128.3 148 50.7
ClCG09G008880 Citrullus lanatus HOM05D007399 ORTHO05D009341 1.3e-27 127.5 228 40.8
Potri.002G244400 Populus trichocarpa HOM05D007399 ORTHO05D009341 1.7e-27 127.1 149 50.3
Solyc09g059950.3 Solanum lycopersicum HOM05D007399 ORTHO05D009341 3.8e-27 125.9 230 37.8
Ah.08g214480 Amaranthus hybridus HOM05D007399 ORTHO05D009341 5.0e-27 125.6 222 39.6
PSO357G0666 Papaver somniferum HOM05D007399 ORTHO05D009341 6.5e-27 125.2 250 38.0
Rhsim01G0254900 Rhododendron simsii HOM05D007399 ORTHO05D009341 6.5e-27 125.2 289 36.7
Sopen09g023130 Solanum pennellii HOM05D007399 ORTHO05D009341 1.1e-26 124.4 230 37.8
Nn1g07919 Nelumbo nucifera HOM05D007399 ORTHO05D009341 1.4e-26 124.0 145 49.7
Sed0009642 Sechium edule HOM05D007399 ORTHO05D009341 1.4e-26 124.0 230 39.6
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 1.9e-26 123.6 223 37.7
PGSC0003DMG401023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 4.2e-26 122.5 231 38.5
CSS0020487 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 5.5e-26 122.1 94 67.0
Actinidia09475 Actinidia chinensis HOM05D007399 ORTHO05D009341 7.2e-26 121.7 188 45.2
Oeu037384.1 Olea europaea HOM05D007399 ORTHO05D009341 2.7e-25 119.8 101 62.4
Cpa.g.sc8.134 Carica papaya HOM05D007399 ORTHO05D009341 4.6e-25 119.0 140 47.9
CARHR081750 Cardamine hirsuta HOM05D007399 ORTHO05D009341 7.9e-25 118.2 171 46.8
Atru.chr6.1505 Acer truncatum HOM05D007399 ORTHO05D009341 2.3e-24 116.7 85 68.2
AUR62001112 Chenopodium quinoa HOM05D007399 ORTHO05D009341 2.3e-24 116.7 215 39.5
SalBow6G3187 Salvia bowleyana HOM05D007399 ORTHO05D009341 2.3e-24 116.7 221 36.2
SalBow6G3685 Salvia bowleyana HOM05D007399 ORTHO05D009341 2.3e-24 116.7 221 36.2
CANSAT01G2134 Cannabis sativa HOM05D007399 ORTHO05D009341 1.1e-23 114.4 227 39.6
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-23 114.4 102 54.9
CANSAT01G0413 Cannabis sativa HOM05D007399 ORTHO05D009341 5.7e-23 112.1 222 39.6
EL10Ac7g17870 Beta vulgaris HOM05D007399 ORTHO05D009341 7.4e-23 111.7 93 59.1
Actinidia23717 Actinidia chinensis HOM05D007399 ORTHO05D009341 9.7e-23 111.3 235 38.3
DCAR_000523 Daucus carota HOM05D007399 ORTHO05D009341 2.8e-22 109.8 180 41.7
CDE06G2632 Ceratophyllum demersum HOM05D007399 ORTHO05D009341 1.4e-21 107.5 95 61.1
CANSAT01G1231 Cannabis sativa HOM05D007399 ORTHO05D009341 2.4e-21 106.7 147 46.9
AUR62008936 Chenopodium quinoa HOM05D007399 ORTHO05D009341 3.1e-21 106.3 200 41.0
CANSAT01G2481 Cannabis sativa HOM05D007399 ORTHO05D009341 1.5e-20 104.0 146 46.6
Sc24g0003500 Simmondsia chinensis HOM05D007399 ORTHO05D009341 1.0e-19 101.3 175 44.6
SEGI_10803 Sequoiadendron giganteum HOM05D007399 ORTHO05D009341 4.4e-15 85.9 75 54.7
HPP92_011779 Vanilla planifolia HOM05D007399 ORTHO05D009341 1.4e-13 80.9 202 32.2
ATR0609G108 Amborella trichopoda HOM05D007399 ORTHO05D009341 2.4e-13 80.1 152 36.2
Hund20426 Selenicereus undatus HOM05D007399 ORTHO05D009341 5.3e-13 79.0 68 55.9
Os01g0918400 Oryza sativa ssp. japonica HOM05D007399 ORTHO05D009341 1.3e-11 74.3 82 43.9
Aqoxy5G00011 Aquilegia oxysepala HOM05D007399 ORTHO05D009341 3.8e-11 72.8 213 31.0
Zm00001eb364650 Zea mays HOM05D007399 ORTHO05D009341 4.2e-10 69.3 96 38.5
CSS0037252 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 2.3e-08 63.5 140 34.3


User provided reference genes

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