Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g012890 Medicago truncatula HOM05D002484 ORTHO05D002541 5.7e-42 173.7 80 100.0
Medtr8g012870 Medicago truncatula HOM05D002484 ORTHO05D002541 6.1e-20 100.5 75 65.3
Medtr8g012795 Medicago truncatula HOM05D002484 ORTHO05D002541 3.9e-19 97.8 80 56.2
Medtr8g012835 Medicago truncatula HOM05D002484 ORTHO05D002541 3.9e-19 97.8 80 57.5
Lj3g0015575 Lotus japonicus HOM05D002484 ORTHO05D002541 1.5e-18 95.9 79 54.4
Medtr8g012885 Medicago truncatula HOM05D002484 ORTHO05D002541 7.4e-18 93.6 80 58.8
Medtr8g012775 Medicago truncatula HOM05D002484 ORTHO05D002541 1.3e-17 92.8 79 53.2
Medtr8g012805 Medicago truncatula HOM05D002484 ORTHO05D002541 6.3e-17 90.5 81 53.1
Psat4g203560 Pisum sativum HOM05D002484 ORTHO05D002541 1.4e-16 89.4 81 53.1
Psat4g203640 Pisum sativum HOM05D002484 ORTHO05D002541 1.8e-16 89.0 80 51.2
Medtr8g012820 Medicago truncatula HOM05D002484 ORTHO05D002541 3.1e-16 88.2 82 54.9
Medtr8g012860 Medicago truncatula HOM05D002484 ORTHO05D002541 3.5e-15 84.7 80 52.5
Medtr8g012815 Medicago truncatula HOM05D002484 ORTHO05D002541 5.9e-15 84.0 84 54.8
TPR.G11187 Trifolium pratense HOM05D002484 ORTHO05D002541 5.9e-15 84.0 79 57.0
TPR.G16448 Trifolium pratense HOM05D002484 ORTHO05D002541 5.9e-15 84.0 79 53.2
TPR.G20187 Trifolium pratense HOM05D002484 ORTHO05D002541 1.7e-14 82.4 79 49.4
Medtr8g012800 Medicago truncatula HOM05D002484 ORTHO05D002541 2.2e-14 82.0 80 48.8
Medtr8g012845 Medicago truncatula HOM05D002484 ORTHO05D002541 1.5e-13 79.3 83 53.0
Medtr8g012875 Medicago truncatula HOM05D002484 ORTHO05D002541 2.5e-13 78.6 81 49.4
Medtr8g012810 Medicago truncatula HOM05D002484 ORTHO05D002541 1.2e-12 76.3 84 52.4
Medtr3g020340 Medicago truncatula HOM05D002484 ORTHO05D002541 2.1e-12 75.5 80 51.2
TPR.G11190 Trifolium pratense HOM05D002484 ORTHO05D002541 2.7e-12 75.1 68 48.5
Ciclev10030125m.g Citrus clementina HOM05D002484 ORTHO05D002541 1.5e-10 69.3 77 42.9
TPR.G11184 Trifolium pratense HOM05D002484 ORTHO05D002541 1.5e-10 69.3 80 43.8
Psat4g205640 Pisum sativum HOM05D002484 ORTHO05D002541 2.0e-10 68.9 74 44.6
Medtr8g012895 Medicago truncatula HOM05D002484 ORTHO05D258586 3.3e-10 68.2 80 50.0
Peaxi162Scf00324g00715 Petunia axillaris HOM05D002484 ORTHO05D002541 3.3e-10 68.2 75 45.3
CAN.G1126.34 Capsicum annuum HOM05D002484 ORTHO05D002541 4.4e-10 67.8 73 42.5
Medtr8g012865 Medicago truncatula HOM05D002484 ORTHO05D002541 4.4e-10 67.8 81 43.2
Peaxi162Scf00324g00716 Petunia axillaris HOM05D002484 ORTHO05D002541 4.4e-10 67.8 74 43.2
Psat4g205720 Pisum sativum HOM05D015613 ORTHO05D011265 4.4e-10 67.8 80 43.8
Solyc07g009260.3 Solanum lycopersicum HOM05D002484 ORTHO05D002541 1.7e-09 65.9 73 42.5
PGR031G2841 Punica granatum HOM05D002484 ORTHO05D002541 2.2e-09 65.5 80 38.8
Peaxi162Scf00324g00722 Petunia axillaris HOM05D002484 ORTHO05D002541 2.8e-09 65.1 74 41.9
Atru.chr13.431 Acer truncatum HOM05D002484 ORTHO05D002541 8.2e-09 63.5 81 40.7
Prupe.1G376000 Prunus persica HOM05D002484 ORTHO05D002541 8.2e-09 63.5 81 45.7
Thhalv10029442m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 1.1e-08 63.2 77 41.6
Psat4g221680 Pisum sativum HOM05D002484 ORTHO05D002541 1.4e-08 62.8 81 40.7
Ciclev10029712m.g Citrus clementina HOM05D002484 ORTHO05D002541 2.4e-08 62.0 83 34.9
Ciclev10029828m.g Citrus clementina HOM05D002484 ORTHO05D002541 2.4e-08 62.0 83 34.9
TPR.G17112 Trifolium pratense HOM05D002484 ORTHO05D002541 2.4e-08 62.0 55 45.5
Medtr8g023090 Medicago truncatula HOM05D002484 ORTHO05D002541 4.1e-08 61.2 78 42.3
RcHm_v2.0_Chr6g0301471 Rosa chinensis HOM05D002484 ORTHO05D002541 4.1e-08 61.2 72 45.8
BcaNung01275 Brassica carinata HOM05D002484 ORTHO05D002541 5.3e-08 60.8 54 46.3
AL1G32330 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 7.0e-08 60.5 75 41.3
FAN20G1957 Fragaria x ananassa HOM05D002484 ORTHO05D002541 7.0e-08 60.5 69 43.5
Psat4g203600 Pisum sativum HOM05D002484 ORTHO05D002541 7.0e-08 60.5 82 42.7
COL.COLO4_25963 Corchorus olitorius HOM05D002484 ORTHO05D002541 1.6e-07 59.3 76 42.1
COL.COLO4_25966 Corchorus olitorius HOM05D002484 ORTHO05D002541 1.6e-07 59.3 72 41.7
Peaxi162Scf00324g00717 Petunia axillaris HOM05D002484 ORTHO05D002541 1.6e-07 59.3 53 47.2
Actinidia27667 Actinidia chinensis HOM05D002484 ORTHO05D002541 2.0e-07 58.9 78 41.0
Medtr8g056870 Medicago truncatula HOM05D002484 ORTHO05D002541 2.0e-07 58.9 85 47.1
Medtr8g056890 Medicago truncatula HOM05D002484 ORTHO05D002541 3.5e-07 58.2 80 41.2
Medtr8g012705 Medicago truncatula HOM05D002484 ORTHO05D002541 4.5e-07 57.8 74 39.2
Duzib248G1325 Durio zibethinus HOM05D001795 ORTHO05D002541 5.9e-07 57.4 80 40.0
Thecc.02G082200 Theobroma cacao HOM05D002484 ORTHO05D002541 5.9e-07 57.4 80 37.5
Thecc.08G031200 Theobroma cacao HOM05D002484 ORTHO05D002541 5.9e-07 57.4 54 46.3
CAN.G559.4 Capsicum annuum HOM05D002484 ORTHO05D002541 2.2e-06 55.5 70 34.3
Migut.N00483 Erythranthe guttata HOM05D002484 ORTHO05D002541 2.9e-06 55.1 77 37.7
Medtr8g012700 Medicago truncatula HOM05D019697 ORTHO05D048926 3.8e-06 54.7 81 40.7


User provided reference genes

Program Settings